RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 TMLHEQ9NVH6 421 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 SMPD4Q9NXE4 827 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 DNAJB9Q9UBS3 223 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 ENPP5Q9UJA9 477 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 PDE10AQ9Y233 779 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 VPS9D1Q9Y2B5 631 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 KCTD3Q9Y597 815 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 CORINQ9Y5Q5 1042 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 A0A1B0GTL3 188 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 C17orf102A2RUQ5 167 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 MEIS3P2A8K0S8 358 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 J3QRK9 145 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 GMNNO75496 209 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 RSL1D1O76021 490 aaKnown RBP8.66□□□□□ -1.02
TDP1-204ENST00000545686 CES1P23141 567 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 PBX3P40426 434 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 OCA2Q04671 838 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 YWHAHQ04917 246 aaPredicted RBP8.66□□□□□ -1.02
TDP1-204ENST00000545686 IL18R1Q13478 541 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 PARP15Q460N3 678 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 DLEU7Q6UYE1 221 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 ANKRD13BQ86YJ7 626 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 PGBD5Q8N414 524 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 PIK3C3Q8NEB9 887 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 ZNF555Q8NEP9 628 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 BPIFB6Q8NFQ5 453 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 ABHD11Q8NFV4 315 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 OR2T11Q8NH01 316 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 SLC22A17Q8WUG5 538 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 S100ZQ8WXG8 99 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 FKBP10Q96AY3 582 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 FBXL8Q96CD0 374 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 MROQ9BYG7 248 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 ATAD3AQ9NVI7 634 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 FAM118AQ9NWS6 357 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 MIOSQ9NXC5 875 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 TIMM22Q9Y584 194 aa8.66□□□□□ -1.02
TDP1-204ENST00000545686 C1orf232A0A0U1RR37 186 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 CASTOR2A6NHX0 329 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 TTC36A6NLP5 189 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 G3V2T6 193 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 MGEA5O60502 916 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 KPNA6O60684 536 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 ZBTB7AO95365 584 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 MT-ND1P03886 318 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 UGT2B4P06133 528 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 ALOX5P09917 674 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 PSMA3P25788 255 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 IL12AP29459 219 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 GJA5P36382 358 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 CASP2P42575 452 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 MTHFRP42898 656 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 CPT1AP50416 773 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 SCNN1GP51170 649 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 PPP2R2BQ00005 443 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 GNA12Q03113 381 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 BFSP2Q13515 415 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 PWP1Q13610 501 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 OXA1LQ15070 435 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 TSNQ15631 228 aaKnown RBP8.65□□□□□ -1.02
TDP1-204ENST00000545686 RBBP7Q16576 425 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 TRIM16LQ309B1 348 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 ZIK1Q3SY52 487 aaPredicted RBP8.65□□□□□ -1.02
TDP1-204ENST00000545686 SETMARQ53H47 684 aaPredicted RBP8.65□□□□□ -1.02
TDP1-204ENST00000545686 C6orf141Q5SZD1 244 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 EGFLAMQ63HQ2 1017 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 ALG1LQ6GMV1 187 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 PAQR3Q6TCH7 311 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 AFTPHQ6ULP2 937 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 SLC16A12Q6ZSM3 486 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 NEK10Q6ZWH5 1172 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 TLK2Q86UE8 772 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 STK32CQ86UX6 486 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 THEM5Q8N1Q8 247 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 FNDC5Q8NAU1 212 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 CHDHQ8NE62 594 aaPredicted RBP8.65□□□□□ -1.02
TDP1-204ENST00000545686 OR10T2Q8NGX3 314 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 BLOC1S5Q8TDH9 187 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 PSMG2Q969U7 264 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 ZNF566Q969W8 418 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 ZNF641Q96N77 438 aaPredicted RBP8.65□□□□□ -1.02
TDP1-204ENST00000545686 CSF3RQ99062 836 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 CGREF1Q99674 301 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 RBM4BQ9BQ04 359 aaKnown RBP8.65□□□□□ -1.02
TDP1-204ENST00000545686 HGH1Q9BTY7 390 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 RBM4Q9BWF3 364 aaKnown RBP8.65□□□□□ -1.02
TDP1-204ENST00000545686 OSBPL10Q9BXB5 764 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 ADNPQ9H2P0 1102 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 TOR3AQ9H497 397 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 NLE1Q9NVX2 485 aaPredicted RBP8.65□□□□□ -1.02
TDP1-204ENST00000545686 SLAMF8Q9P0V8 285 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 ZNF225Q9UK10 706 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 DOLKQ9UPQ8 538 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 AP3M1Q9Y2T2 418 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 MED16Q9Y2X0 877 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 SNX5Q9Y5X3 404 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 ARL5AQ9Y689 179 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 DOCK3Q8IZD9 2030 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 M0QZ92 97 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 B4GAT1O43505 415 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms