RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 TAF3Q5VWG9 929 aa15.05■□□□□ -0
CLSTN3-216ENST00000545663 FBXO38Q6PIJ6 1188 aa15.05■□□□□ -0
CLSTN3-216ENST00000545663 ARCQ7LC44 396 aa15.05■□□□□ -0
CLSTN3-216ENST00000545663 SLFN11Q7Z7L1 901 aa15.05■□□□□ -0
CLSTN3-216ENST00000545663 CATSPER1Q8NEC5 780 aa15.05■□□□□ -0
CLSTN3-216ENST00000545663 PPP4R1Q8TF05 950 aa15.05■□□□□ -0
CLSTN3-216ENST00000545663 CENPIQ92674 756 aaPredicted RBP15.05■□□□□ -0
CLSTN3-216ENST00000545663 MTFMTQ96DP5 389 aaKnown RBP15.05■□□□□ -0
CLSTN3-216ENST00000545663 GBP5Q96PP8 586 aa15.05■□□□□ -0
CLSTN3-216ENST00000545663 NOD2Q9HC29 1040 aa15.05■□□□□ -0
CLSTN3-216ENST00000545663 P4HTMQ9NXG6 502 aa15.05■□□□□ -0
CLSTN3-216ENST00000545663 TRIM10Q9UDY6 481 aa15.05■□□□□ -0
CLSTN3-216ENST00000545663 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.05■□□□□ -0
CLSTN3-216ENST00000545663 CSPG4Q6UVK1 2322 aa15.04■□□□□ -0
CLSTN3-216ENST00000545663 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.04■□□□□ -0
CLSTN3-216ENST00000545663 FAM221AA4D161 298 aa15.04■□□□□ -0
CLSTN3-216ENST00000545663 PDZK1P1A8MUH7 402 aa15.04■□□□□ -0
CLSTN3-216ENST00000545663 FADS2P1A8MWK0 482 aa15.04■□□□□ -0
CLSTN3-216ENST00000545663 ALOX12BO75342 701 aa15.04■□□□□ -0
CLSTN3-216ENST00000545663 ZNF8P17098 575 aaPredicted RBP15.04■□□□□ -0
CLSTN3-216ENST00000545663 FECHP22830 423 aa15.04■□□□□ -0
CLSTN3-216ENST00000545663 STX17P56962 302 aa15.04■□□□□ -0
CLSTN3-216ENST00000545663 LTBQ06643 244 aa15.04■□□□□ -0
CLSTN3-216ENST00000545663 SLC10A7Q0GE19 358 aa15.04■□□□□ -0
CLSTN3-216ENST00000545663 STIM1Q13586 685 aa15.04■□□□□ -0
CLSTN3-216ENST00000545663 ISM2Q6H9L7 571 aa15.04■□□□□ -0
CLSTN3-216ENST00000545663 XKRXQ6PP77 449 aa15.04■□□□□ -0
CLSTN3-216ENST00000545663 GFRALQ6UXV0 394 aa15.04■□□□□ -0
CLSTN3-216ENST00000545663 STRADAQ7RTN6 431 aa15.04■□□□□ -0
CLSTN3-216ENST00000545663 PGBD5Q8N414 524 aa15.04■□□□□ -0
CLSTN3-216ENST00000545663 BCORP1Q8N888 145 aa15.04■□□□□ -0
CLSTN3-216ENST00000545663 CPT1BQ92523 772 aa15.04■□□□□ -0
CLSTN3-216ENST00000545663 NTAN1Q96AB6 310 aa15.04■□□□□ -0
CLSTN3-216ENST00000545663 PPM1MQ96MI6 270 aa15.04■□□□□ -0
CLSTN3-216ENST00000545663 PSKH2Q96QS6 385 aa15.04■□□□□ -0
CLSTN3-216ENST00000545663 WDR24Q96S15 920 aa15.04■□□□□ -0
CLSTN3-216ENST00000545663 CATSPERBQ9H7T0 1116 aa15.04■□□□□ -0
CLSTN3-216ENST00000545663 KIAA1468Q9P260 1216 aa15.04■□□□□ -0
CLSTN3-216ENST00000545663 ATXN10Q9UBB4 475 aa15.04■□□□□ -0
CLSTN3-216ENST00000545663 APEX2Q9UBZ4 518 aa15.04■□□□□ -0
CLSTN3-216ENST00000545663 DNAJC16Q9Y2G8 782 aa15.04■□□□□ -0
CLSTN3-216ENST00000545663 C2CD4BA6NLJ0 364 aa15.03■□□□□ -0
CLSTN3-216ENST00000545663 PEX12O00623 359 aa15.03■□□□□ -0
CLSTN3-216ENST00000545663 ATMINO43313 823 aaPredicted RBP15.03■□□□□ -0
CLSTN3-216ENST00000545663 NUAK1O60285 661 aa15.03■□□□□ -0
CLSTN3-216ENST00000545663 SOCS5O75159 536 aa15.03■□□□□ -0
CLSTN3-216ENST00000545663 PDHA1P08559 390 aa15.03■□□□□ -0
CLSTN3-216ENST00000545663 CLCNKAP51800 687 aa15.03■□□□□ -0
CLSTN3-216ENST00000545663 DRG2P55039 364 aaKnown RBP15.03■□□□□ -0
CLSTN3-216ENST00000545663 SOX8P57073 446 aa15.03■□□□□ -0
CLSTN3-216ENST00000545663 CCDC183Q5T5S1 534 aa15.03■□□□□ -0
CLSTN3-216ENST00000545663 TTI2Q6NXR4 508 aa15.03■□□□□ -0
CLSTN3-216ENST00000545663 CRTC3Q6UUV7 619 aa15.03■□□□□ -0
CLSTN3-216ENST00000545663 TMEM207Q6UWW9 146 aa15.03■□□□□ -0
CLSTN3-216ENST00000545663 NLRP8Q86W28 1048 aa15.03■□□□□ -0
CLSTN3-216ENST00000545663 PRIMA1Q86XR5 153 aa15.03■□□□□ -0
CLSTN3-216ENST00000545663 TAAR6Q96RI8 345 aa15.03■□□□□ -0
CLSTN3-216ENST00000545663 SPOCK3Q9BQ16 436 aa15.03■□□□□ -0
CLSTN3-216ENST00000545663 TMEM121Q9BTD3 319 aa15.03■□□□□ -0
CLSTN3-216ENST00000545663 RMI1Q9H9A7 625 aa15.03■□□□□ -0
CLSTN3-216ENST00000545663 FAM207AQ9NSI2 230 aaPredicted RBP15.03■□□□□ -0
CLSTN3-216ENST00000545663 ADGRG1Q9Y653 693 aa15.03■□□□□ -0
CLSTN3-216ENST00000545663 UBA6A0AVT1 1052 aaPredicted RBP15.02■□□□□ -0
CLSTN3-216ENST00000545663 ARHGAP42A6NI28 874 aa15.02■□□□□ -0
CLSTN3-216ENST00000545663 DFFAO00273 331 aa15.02■□□□□ -0
CLSTN3-216ENST00000545663 KLHL41O60662 606 aa15.02■□□□□ -0
CLSTN3-216ENST00000545663 PGLSO95336 258 aa15.02■□□□□ -0
CLSTN3-216ENST00000545663 CYP11B1P15538 503 aa15.02■□□□□ -0
CLSTN3-216ENST00000545663 CA7P43166 264 aa15.02■□□□□ -0
CLSTN3-216ENST00000545663 PTPN9P43378 593 aa15.02■□□□□ -0
CLSTN3-216ENST00000545663 IST1P53990 364 aa15.02■□□□□ -0
CLSTN3-216ENST00000545663 CSNK1G2P78368 415 aa15.02■□□□□ -0
CLSTN3-216ENST00000545663 SSPNQ14714 243 aa15.02■□□□□ -0
CLSTN3-216ENST00000545663 DNTTIP2Q5QJE6 756 aaKnown RBP15.02■□□□□ -0
CLSTN3-216ENST00000545663 SCYL2Q6P3W7 929 aa15.02■□□□□ -0
CLSTN3-216ENST00000545663 IGFL2Q6UWQ7 119 aa15.02■□□□□ -0
CLSTN3-216ENST00000545663 USP45Q70EL2 814 aa15.02■□□□□ -0
CLSTN3-216ENST00000545663 TAOK1Q7L7X3 1001 aa15.02■□□□□ -0
CLSTN3-216ENST00000545663 PPP1R32Q7Z5V6 425 aa15.02■□□□□ -0
CLSTN3-216ENST00000545663 ARHGAP12Q8IWW6 846 aa15.02■□□□□ -0
CLSTN3-216ENST00000545663 PIH1D2Q8WWB5 315 aa15.02■□□□□ -0
CLSTN3-216ENST00000545663 MAGEB10Q96LZ2 347 aaPredicted RBP15.02■□□□□ -0
CLSTN3-216ENST00000545663 TLR10Q9BXR5 811 aa15.02■□□□□ -0
CLSTN3-216ENST00000545663 OR2AG1Q9H205 316 aa15.02■□□□□ -0
CLSTN3-216ENST00000545663 SP110Q9HB58 689 aa15.02■□□□□ -0
CLSTN3-216ENST00000545663 ATP13A2Q9NQ11 1180 aa15.02■□□□□ -0
CLSTN3-216ENST00000545663 DLL4Q9NR61 685 aa15.02■□□□□ -0
CLSTN3-216ENST00000545663 POT1Q9NUX5 634 aa15.02■□□□□ -0
CLSTN3-216ENST00000545663 DTLQ9NZJ0 730 aa15.02■□□□□ -0
CLSTN3-216ENST00000545663 RPH3AQ9Y2J0 694 aaPredicted RBP15.02■□□□□ -0
CLSTN3-216ENST00000545663 A0A1W2PQ67 120 aa15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 UNC5CO95185 931 aa15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 DNAJA1P31689 397 aaKnown RBP15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 STC1P52823 247 aa15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 FOXD4Q12950 439 aaPredicted RBP15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 LBRQ14739 615 aaKnown RBP15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 PRKD1Q15139 912 aaPredicted RBP15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 TDRD12Q587J7 1177 aaKnown RBP15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 ZNF789Q5FWF6 425 aa15.01□□□□□ -0.01
CLSTN3-216ENST00000545663 MLIPQ5VWP3 458 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms