RNA–Protein interactions for RNA: ENST00000545549.1

LINC01965-204, Transcript of long intergenic non-protein coding RNA 1965, humanhuman

TSL 4 BASIC

Gene LINC01965, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01965-204ENST00000545549 ITGA2BP08514 1039 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 DLDP09622 509 aaKnown RBP3.59□□□□□ -1.83
LINC01965-204ENST00000545549 CISD3P0C7P0 127 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 TPBGLP0DKB5 382 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 SLC2A3P11169 496 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 STMN1P16949 149 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 GOT1P17174 413 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 NME2P22392 152 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 MGAT1P26572 445 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 YWHAQP27348 245 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 PSMB4P28070 264 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 CRABP2P29373 138 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 ADSLP30566 484 aaPredicted RBP3.59□□□□□ -1.83
LINC01965-204ENST00000545549 HOXC13P31276 330 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 SERPINB5P36952 375 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 ETV4P43268 484 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 HSPA13P48723 471 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 PAPOLAP51003 745 aaKnown RBP3.59□□□□□ -1.83
LINC01965-204ENST00000545549 RAP1GDS1P52306 607 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 SLC5A3P53794 718 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 ARPP19P56211 112 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 HDAC4P56524 1084 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 MAP3K7CLP57077 242 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 STX1BP61266 288 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 CXADRP78310 365 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 PFKPQ01813 784 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 OCRLQ01968 901 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 GBE1Q04446 702 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 TNK2Q07912 1038 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 MTAPQ13126 283 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 PRKAA1Q13131 559 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 SRSF5Q13243 272 aaKnown RBP3.59□□□□□ -1.83
LINC01965-204ENST00000545549 MPP3Q13368 585 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 MTM1Q13496 603 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 MED21Q13503 144 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 CUL3Q13618 768 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 BLMHQ13867 455 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 BMPR2Q13873 1038 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 MAP7Q14244 749 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 FRG1Q14331 258 aaKnown RBP3.59□□□□□ -1.83
LINC01965-204ENST00000545549 PAFAH1B3Q15102 231 aaKnown RBP3.59□□□□□ -1.83
LINC01965-204ENST00000545549 TAF5Q15542 800 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 MGAT5BQ3V5L5 792 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 MMEL1Q495T6 779 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 ANKRD20A4Q4UJ75 823 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 PCID2Q5JVF3 399 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 BRMS1LQ5PSV4 323 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 SYCP2LQ5T4T6 812 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 UBAP2Q5T6F2 1119 aaKnown RBP3.59□□□□□ -1.83
LINC01965-204ENST00000545549 GPR158Q5T848 1215 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 TEDDM1Q5T9Z0 273 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 BTBD8Q5XKL5 378 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 STEAP4Q687X5 459 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 SEL1L3Q68CR1 1132 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 NAIF1Q69YI7 327 aaPredicted RBP3.59□□□□□ -1.83
LINC01965-204ENST00000545549 NCBP2-AS2Q69YL0 99 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 ANKRD34AQ69YU3 496 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 NXNQ6DKJ4 435 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 FSTL4Q6MZW2 842 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 CGB2Q6NT52 195 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 RWDD4Q6NW29 188 aaKnown RBP3.59□□□□□ -1.83
LINC01965-204ENST00000545549 ZFP1Q6P2D0 407 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 TMEM154Q6P9G4 183 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 PIGZQ86VD9 579 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 CAND1Q86VP6 1230 aaKnown RBP3.59□□□□□ -1.83
LINC01965-204ENST00000545549 KCNMB4Q86W47 210 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 FAM131BQ86XD5 332 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 ZNF354CQ86Y25 554 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 SPATA2LQ8IUW3 424 aaPredicted RBP3.59□□□□□ -1.83
LINC01965-204ENST00000545549 ZNF683Q8IZ20 524 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 ATPAF2Q8N5M1 289 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 CCDC33Q8N5R6 958 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 ARFGAP1Q8N6T3 406 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 PQLC3Q8N755 202 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.59□□□□□ -1.83
LINC01965-204ENST00000545549 ARL14EPQ8N8R7 260 aaPredicted RBP3.59□□□□□ -1.83
LINC01965-204ENST00000545549 ICA1LQ8NDH6 482 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 PDZD8Q8NEN9 1154 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 ST13P5Q8NFI4 369 aaPredicted RBP3.59□□□□□ -1.83
LINC01965-204ENST00000545549 TTC8Q8TAM2 541 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 BPIFB1Q8TDL5 484 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 SH3RF2Q8TEC5 729 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 MZB1Q8WU39 189 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 PTPRN2Q92932 1015 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 UTP4Q969X6 686 aaKnown RBP3.59□□□□□ -1.83
LINC01965-204ENST00000545549 NTAN1Q96AB6 310 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 SLC39A13Q96H72 371 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 SIGLEC10Q96LC7 697 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 LRGUKQ96M69 825 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 AGAP3Q96P47 875 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 NR1H4Q96RI1 486 aaPredicted RBP3.59□□□□□ -1.83
LINC01965-204ENST00000545549 PEBP4Q96S96 227 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 NELL2Q99435 816 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 ZNF184Q99676 751 aaPredicted RBP3.59□□□□□ -1.83
LINC01965-204ENST00000545549 RBBP8Q99708 897 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 SEPT5Q99719 369 aaPredicted RBP3.59□□□□□ -1.83
LINC01965-204ENST00000545549 IER2Q9BTL4 223 aa3.59□□□□□ -1.83
LINC01965-204ENST00000545549 TRMT61BQ9BVS5 477 aaKnown RBP3.59□□□□□ -1.83
LINC01965-204ENST00000545549 CADM1Q9BY67 442 aaKnown RBP3.59□□□□□ -1.83
LINC01965-204ENST00000545549 TRIM15Q9C019 465 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms