RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 SLC8A3P57103 927 aa6.73□□□□□ -1.33
LDHA-223ENST00000545215 GSDMDP57764 484 aa6.73□□□□□ -1.33
LDHA-223ENST00000545215 POLR2FP61218 127 aaKnown RBP6.73□□□□□ -1.33
LDHA-223ENST00000545215 LRMPQ12912 555 aa6.73□□□□□ -1.33
LDHA-223ENST00000545215 RAPGEF1Q13905 1077 aa6.73□□□□□ -1.33
LDHA-223ENST00000545215 CATSPEREQ5SY80 951 aa6.73□□□□□ -1.33
LDHA-223ENST00000545215 DCAF12Q5T6F0 453 aa6.73□□□□□ -1.33
LDHA-223ENST00000545215 SNX30Q5VWJ9 437 aa6.73□□□□□ -1.33
LDHA-223ENST00000545215 PPP1R2P3Q6NXS1 205 aa6.73□□□□□ -1.33
LDHA-223ENST00000545215 ZNF677Q86XU0 584 aa6.73□□□□□ -1.33
LDHA-223ENST00000545215 ZDHHC13Q8IUH4 622 aa6.73□□□□□ -1.33
LDHA-223ENST00000545215 MMAAQ8IVH4 418 aaKnown RBP6.73□□□□□ -1.33
LDHA-223ENST00000545215 DRC7Q8IY82 874 aa6.73□□□□□ -1.33
LDHA-223ENST00000545215 FAM71AQ8IYT1 594 aa6.73□□□□□ -1.33
LDHA-223ENST00000545215 NUP93Q8N1F7 819 aa6.73□□□□□ -1.33
LDHA-223ENST00000545215 CRYBG2Q8N1P7 616 aa6.73□□□□□ -1.33
LDHA-223ENST00000545215 CCDC112Q8NEF3 446 aa6.73□□□□□ -1.33
LDHA-223ENST00000545215 PDZD8Q8NEN9 1154 aa6.73□□□□□ -1.33
LDHA-223ENST00000545215 OR6C4Q8NGE1 309 aa6.73□□□□□ -1.33
LDHA-223ENST00000545215 SLC35G2Q8TBE7 412 aa6.73□□□□□ -1.33
LDHA-223ENST00000545215 SLC2A11Q9BYW1 496 aa6.73□□□□□ -1.33
LDHA-223ENST00000545215 TTYH3Q9C0H2 523 aa6.73□□□□□ -1.33
LDHA-223ENST00000545215 NACA2Q9H009 215 aa6.73□□□□□ -1.33
LDHA-223ENST00000545215 MTG2Q9H4K7 406 aa6.73□□□□□ -1.33
LDHA-223ENST00000545215 SIX2Q9NPC8 291 aa6.73□□□□□ -1.33
LDHA-223ENST00000545215 DMAP1Q9NPF5 467 aaPredicted RBP6.73□□□□□ -1.33
LDHA-223ENST00000545215 SLC39A1Q9NY26 324 aa6.73□□□□□ -1.33
LDHA-223ENST00000545215 ST6GALNAC2Q9UJ37 374 aa6.73□□□□□ -1.33
LDHA-223ENST00000545215 CLEC4EQ9ULY5 219 aa6.73□□□□□ -1.33
LDHA-223ENST00000545215 CAPN11Q9UMQ6 739 aa6.73□□□□□ -1.33
LDHA-223ENST00000545215 NAALADL1Q9UQQ1 740 aa6.73□□□□□ -1.33
LDHA-223ENST00000545215 MYO7BQ6PIF6 2116 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 SPTY2D1-AS1A0A0U1RR47 76 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 FAM90A27PA6NNH2 459 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 F8VZ95 297 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 YY2O15391 372 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 NRDCO43847 1150 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 BUB1BO60566 1050 aaPredicted RBP6.72□□□□□ -1.33
LDHA-223ENST00000545215 GFPT2O94808 682 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 ZGLP1P0C6A0 271 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 TMEM253P0C7T8 217 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 VDRP11473 427 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 KRT5P13647 590 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 AGAP20933 346 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 TUBP50607 506 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 NDST1P52848 882 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 SLC5A3P53794 718 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 ADKP55263 362 aaKnown RBP6.72□□□□□ -1.33
LDHA-223ENST00000545215 SNX16P57768 344 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 MVKQ03426 396 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 PCOLCEQ15113 449 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 ASIC2Q16515 512 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 STEAP3Q658P3 488 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 SPOPLQ6IQ16 392 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 DPY19L2P1Q6NXN4 242 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 TMEM270Q6UE05 265 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.72□□□□□ -1.33
LDHA-223ENST00000545215 C16orf47Q6ZP98 133 aaPredicted RBP6.72□□□□□ -1.33
LDHA-223ENST00000545215 Q6ZSR6 202 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 RRAGAQ7L523 313 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 ABI3BPQ7Z7G0 1075 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 ACOT1Q86TX2 421 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 VPS36Q86VN1 386 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 CXorf67Q86X51 503 aaPredicted RBP6.72□□□□□ -1.33
LDHA-223ENST00000545215 ARHGEF19Q8IW93 802 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 ARL10Q8N8L6 244 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 OR8K1Q8NGG5 319 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 SCAMP5Q8TAC9 235 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 OVCA2Q8WZ82 227 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 FAM131CQ96AQ9 280 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 SMARCD1Q96GM5 515 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 TEFMQ96QE5 360 aaKnown RBP6.72□□□□□ -1.33
LDHA-223ENST00000545215 KCNK16Q96T55 309 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 TWSG1Q9GZX9 223 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 AIPL1Q9NZN9 384 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 CHORDC1Q9UHD1 332 aaPredicted RBP6.72□□□□□ -1.33
LDHA-223ENST00000545215 APPL1Q9UKG1 709 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 B3GNT3Q9Y2A9 372 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 CEP83Q9Y592 693 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 PCDHB4Q9Y5E5 795 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 GPR45Q9Y5Y3 372 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 UNC13CQ8NB66 2214 aa6.72□□□□□ -1.33
LDHA-223ENST00000545215 AKR1B15C9JRZ8 316 aaPredicted RBP6.71□□□□□ -1.34
LDHA-223ENST00000545215 PLRG1O43660 514 aaKnown RBP6.71□□□□□ -1.34
LDHA-223ENST00000545215 TLR5O60602 858 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 MAFKO60675 156 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 MFAP3LO75121 409 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 LSM8O95777 96 aaKnown RBP6.71□□□□□ -1.34
LDHA-223ENST00000545215 GYPCP04921 128 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 ANXA6P08133 673 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 MSL3P1P0C860 447 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 CCDC130P13994 396 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 CD58P19256 250 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 C5AR1P21730 350 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 KRT9P35527 623 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 PRKCIP41743 596 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 MANFP55145 182 aaKnown RBP6.71□□□□□ -1.34
LDHA-223ENST00000545215 CDK17Q00537 523 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 SRSF2Q01130 221 aaKnown RBP6.71□□□□□ -1.34
LDHA-223ENST00000545215 TBX2Q13207 712 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms