RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 PPP6CO00743 305 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 RAD51BO15315 384 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 NBNO60934 754 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 GJB3O75712 270 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 ABLIM3O94929 683 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 GLUD1P00367 558 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 C1RP00736 705 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 S100BP04271 92 aaPredicted RBP12.32□□□□□ -0.44
PAAF1-215ENST00000544909 PIRTP0C851 137 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 ELNP15502 786 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 TSPAN8P19075 237 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 RFC2P35250 354 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 ZFP36L2P47974 494 aaKnown RBP12.32□□□□□ -0.44
PAAF1-215ENST00000544909 GSK3BP49841 420 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 NOGQ13253 232 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 PTPRCAPQ14761 206 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 VEPH1Q14D04 833 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 ATP6AP1Q15904 470 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 NRF1Q16656 503 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 GPR33Q49SQ1 333 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 PSAPL1Q6NUJ1 521 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 CYP2R1Q6VVX0 501 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 RBFAQ8N0V3 343 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 CBARPQ8N350 705 aaPredicted RBP12.32□□□□□ -0.44
PAAF1-215ENST00000544909 TERB1Q8NA31 727 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 DBF4BQ8NFT6 615 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 ZNF461Q8TAF7 563 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 ACDQ96AP0 544 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 ISG20Q96AZ6 181 aaKnown RBP12.32□□□□□ -0.44
PAAF1-215ENST00000544909 CIB1Q99828 191 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 KCTD14Q9BQ13 255 aaPredicted RBP12.32□□□□□ -0.44
PAAF1-215ENST00000544909 MUC3BQ9H195 1237 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 RDH14Q9HBH5 336 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 OLAHQ9NV23 265 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 RNF186Q9NXI6 227 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 CD274Q9NZQ7 290 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 FKBPLQ9UIM3 349 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 GNPTGQ9UJJ9 305 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 ANAPC2Q9UJX6 822 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 ZNF225Q9UK10 706 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 RNF11Q9Y3C5 154 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 PCDHB3Q9Y5E6 796 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 AK5Q9Y6K8 562 aa12.32□□□□□ -0.44
PAAF1-215ENST00000544909 TRBV5-4A0A0C4DH59 114 aa12.31□□□□□ -0.44
PAAF1-215ENST00000544909 TCRBV5S2A0A599 114 aa12.31□□□□□ -0.44
PAAF1-215ENST00000544909 H0YAE9 185 aa12.31□□□□□ -0.44
PAAF1-215ENST00000544909 CBX4O00257 560 aa12.31□□□□□ -0.44
PAAF1-215ENST00000544909 CLGNO14967 610 aa12.31□□□□□ -0.44
PAAF1-215ENST00000544909 CSPG5O95196 566 aa12.31□□□□□ -0.44
PAAF1-215ENST00000544909 KLKB1P03952 638 aa12.31□□□□□ -0.44
PAAF1-215ENST00000544909 CDH2P19022 906 aaPredicted RBP12.31□□□□□ -0.44
PAAF1-215ENST00000544909 DIO3P55073 304 aa12.31□□□□□ -0.44
PAAF1-215ENST00000544909 TRAF2Q12933 501 aa12.31□□□□□ -0.44
PAAF1-215ENST00000544909 RBBP7Q16576 425 aa12.31□□□□□ -0.44
PAAF1-215ENST00000544909 MPP7Q5T2T1 576 aa12.31□□□□□ -0.44
PAAF1-215ENST00000544909 LAYNQ6UX15 382 aa12.31□□□□□ -0.44
PAAF1-215ENST00000544909 RBM44Q6ZP01 1051 aaKnown RBP12.31□□□□□ -0.44
PAAF1-215ENST00000544909 METTL25Q8N6Q8 603 aa12.31□□□□□ -0.44
PAAF1-215ENST00000544909 GIPC2Q8TF65 315 aa12.31□□□□□ -0.44
PAAF1-215ENST00000544909 HIC2Q96JB3 615 aa12.31□□□□□ -0.44
PAAF1-215ENST00000544909 KCNA7Q96RP8 456 aa12.31□□□□□ -0.44
PAAF1-215ENST00000544909 SLC39A3Q9BRY0 314 aa12.31□□□□□ -0.44
PAAF1-215ENST00000544909 BDH2Q9BUT1 245 aa12.31□□□□□ -0.44
PAAF1-215ENST00000544909 C2orf49Q9BVC5 232 aaPredicted RBP12.31□□□□□ -0.44
PAAF1-215ENST00000544909 LATS2Q9NRM7 1088 aa12.31□□□□□ -0.44
PAAF1-215ENST00000544909 LHX3Q9UBR4 397 aa12.31□□□□□ -0.44
PAAF1-215ENST00000544909 ZNF106Q9H2Y7 1883 aaKnown RBP12.3□□□□□ -0.44
PAAF1-215ENST00000544909 NIPSNAP2O75323 286 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 TIPRLO75663 272 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 PGLSO95336 258 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 OLFM2O95897 454 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 CD160O95971 181 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 MT-CO1P00395 513 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 CBSLP0DN79 551 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 CHRM3P20309 590 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 DGKAP23743 735 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 CBSP35520 551 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 ALDH7A1P49419 539 aaKnown RBP12.3□□□□□ -0.44
PAAF1-215ENST00000544909 LIPEQ05469 1076 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 MERTKQ12866 999 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 SLC36A3Q495N2 470 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 ZRANB3Q5FWF4 1079 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 ARMC12Q5T9G4 340 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 RNF219Q5W0B1 726 aaPredicted RBP12.3□□□□□ -0.44
PAAF1-215ENST00000544909 LHX8Q68G74 356 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 RETSATQ6NUM9 610 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 SBSNQ6UWP8 590 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 FRA10AC1Q70Z53 315 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 SNX20Q7Z614 316 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 ZFP28Q8NHY6 868 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 PROKR1Q8TCW9 393 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 EEF1AKMT1Q8WVE0 214 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 NSMCE3Q96MG7 304 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 LYSMD1Q96S90 227 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 SLC29A1Q99808 456 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 SH3GL1Q99961 368 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 ADI1Q9BV57 179 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 GRIP2Q9C0E4 1043 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 CLPBQ9H078 707 aa12.3□□□□□ -0.44
PAAF1-215ENST00000544909 SEMA6AQ9H2E6 1030 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms