RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 LYSMD1Q96S90 227 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 SLC6A17Q9H1V8 727 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 NSUN3Q9H649 340 aaKnown RBP13.51□□□□□ -0.25
HCFC2-202ENST00000544223 ZNF225Q9UK10 706 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 MYO10Q9HD67 2058 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 TRBV5-4A0A0C4DH59 114 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 UPK3BL1B0FP48 263 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 UPK3BL2E5RIL1 263 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 GYG2O15488 501 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 GM2AP17900 193 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 MXRA7P84157 204 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 DMC1Q14565 340 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 ACOX1Q15067 660 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 TGFBIQ15582 683 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 IER5LQ5T953 404 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 GPSM1Q86YR5 675 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 TERB1Q8NA31 727 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 OR52B6Q8NGF0 335 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.5□□□□□ -0.25
HCFC2-202ENST00000544223 SLC2A11Q9BYW1 496 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 TFB2MQ9H5Q4 396 aaKnown RBP13.5□□□□□ -0.25
HCFC2-202ENST00000544223 LATS2Q9NRM7 1088 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 CORO1CQ9ULV4 474 aaPredicted RBP13.5□□□□□ -0.25
HCFC2-202ENST00000544223 DHRS7Q9Y394 339 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 TRAF6Q9Y4K3 522 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 H3BQ06 376 aaPredicted RBP13.5□□□□□ -0.25
HCFC2-202ENST00000544223 SDHDO14521 159 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 NPHS1O60500 1241 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 MMP20O60882 483 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 H2AFYO75367 372 aaKnown RBP13.5□□□□□ -0.25
HCFC2-202ENST00000544223 TCF3P15923 654 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 PTPN4P29074 926 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 BRAT1Q6PJG6 821 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 SBSNQ6UWP8 590 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 LMNTD1Q8N9Z9 388 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 PIP4K2CQ8TBX8 421 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 CNDP1Q96KN2 507 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 LENG8Q96PV6 779 aaPredicted RBP13.5□□□□□ -0.25
HCFC2-202ENST00000544223 FAM129BQ96TA1 746 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 COPS8Q99627 209 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 GDE1Q9NZC3 331 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 PPIL1Q9Y3C6 166 aa13.5□□□□□ -0.25
HCFC2-202ENST00000544223 GON4LQ3T8J9 2241 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 CCDC22O60826 627 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 ENTPD5O75356 428 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 KATNA1O75449 491 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 ELFN1P0C7U0 828 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 LINC00032P0C843 101 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 HNRNPH1P31943 449 aaKnown RBP13.49□□□□□ -0.25
HCFC2-202ENST00000544223 POLR2LP62875 67 aaKnown RBP13.49□□□□□ -0.25
HCFC2-202ENST00000544223 TEX9Q8N6V9 391 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 FAM13CQ8NE31 585 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 FAM83DQ9H4H8 585 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 SUN2Q9UH99 717 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 GNPTGQ9UJJ9 305 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 SLC27A6Q9Y2P4 619 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 DNAJC15Q9Y5T4 150 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 KNL1Q8NG31 2342 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 PRR23AA6NEV1 266 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 PFDN6O15212 129 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 KAT7O95251 611 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 LAMP2P13473 410 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 CALB2P22676 271 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 PBLDP30039 288 aaPredicted RBP13.49□□□□□ -0.25
HCFC2-202ENST00000544223 VIPR1P32241 457 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 SLC26A3P40879 764 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 PSMD8P48556 350 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 PIK3CGP48736 1102 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 CLCQ05315 142 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 RAB30Q15771 203 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 TXNDC11Q6PKC3 985 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 YAF2Q8IY57 180 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 NKAPQ8N5F7 415 aaKnown RBP13.49□□□□□ -0.25
HCFC2-202ENST00000544223 BTBD10Q9BSF8 475 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 TUBB1Q9H4B7 451 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 POPDC3Q9HBV1 291 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 SLC8A2Q9UPR5 921 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 CDYLQ9Y232 598 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 VPS9D1Q9Y2B5 631 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 PRKAB1Q9Y478 270 aa13.49□□□□□ -0.25
HCFC2-202ENST00000544223 F8W8V4 182 aa13.48□□□□□ -0.25
HCFC2-202ENST00000544223 GSC2O15499 205 aa13.48□□□□□ -0.25
HCFC2-202ENST00000544223 LTBRP36941 435 aa13.48□□□□□ -0.25
HCFC2-202ENST00000544223 MMP12P39900 470 aa13.48□□□□□ -0.25
HCFC2-202ENST00000544223 HSPA7P48741 367 aa13.48□□□□□ -0.25
HCFC2-202ENST00000544223 CTSCP53634 463 aa13.48□□□□□ -0.25
HCFC2-202ENST00000544223 RBBP7Q16576 425 aa13.48□□□□□ -0.25
HCFC2-202ENST00000544223 HNRNPA1L2Q32P51 320 aaKnown RBP13.48□□□□□ -0.25
HCFC2-202ENST00000544223 PLA2G4EQ3MJ16 856 aa13.48□□□□□ -0.25
HCFC2-202ENST00000544223 C2orf27AQ580R0 203 aa13.48□□□□□ -0.25
HCFC2-202ENST00000544223 ATAT1Q5SQI0 421 aa13.48□□□□□ -0.25
HCFC2-202ENST00000544223 FBXL19Q6PCT2 694 aa13.48□□□□□ -0.25
HCFC2-202ENST00000544223 LIPIQ6XZB0 460 aa13.48□□□□□ -0.25
HCFC2-202ENST00000544223 CERS6Q6ZMG9 384 aa13.48□□□□□ -0.25
HCFC2-202ENST00000544223 FRA10AC1Q70Z53 315 aa13.48□□□□□ -0.25
HCFC2-202ENST00000544223 SLC22A9Q8IVM8 553 aa13.48□□□□□ -0.25
HCFC2-202ENST00000544223 DDIASQ8IXT1 998 aa13.48□□□□□ -0.25
HCFC2-202ENST00000544223 ZBTB2Q8N680 514 aa13.48□□□□□ -0.25
HCFC2-202ENST00000544223 OR9I1Q8NGQ6 314 aa13.48□□□□□ -0.25
HCFC2-202ENST00000544223 RHEBL1Q8TAI7 183 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms