RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 RPL26L1Q9UNX3 145 aaKnown RBP15.31■□□□□ 0.04
CHD4-210ENST00000544040 MED31Q9Y3C7 131 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 USP31Q70CQ4 1352 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 TBC1D3DA0A087WVF3 549 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 TBC1D3IA0A087WXS9 549 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 TBC1D3EA0A087X179 549 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 TBC1D3KA0A087X1G2 549 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 GLYATL1P3A0A0U1RQE8 302 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 TBC1D3FA6NER0 549 aaPredicted RBP15.31■□□□□ 0.04
CHD4-210ENST00000544040 TBC1D3LB9A6J9 549 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 NT5C1B-RDH14C9J2C7 533 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 SLC9A3R1O14745 358 aaPredicted RBP15.31■□□□□ 0.04
CHD4-210ENST00000544040 ZNF208O43345 1280 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 TBX1O43435 398 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 IFNW1P05000 195 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 TBC1D3HP0C7X1 549 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 CD247P20963 164 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 DRG2P55039 364 aaKnown RBP15.31■□□□□ 0.04
CHD4-210ENST00000544040 DCDC1P59894 354 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 PPP3R1P63098 170 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 KLF1Q13351 362 aaPredicted RBP15.31■□□□□ 0.04
CHD4-210ENST00000544040 TBC1D3GQ6DHY5 549 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 TBC1D3CQ6IPX1 549 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 RBM23Q86U06 439 aaKnown RBP15.31■□□□□ 0.04
CHD4-210ENST00000544040 TBC1D3Q8IZP1 549 aaPredicted RBP15.31■□□□□ 0.04
CHD4-210ENST00000544040 OR10A6Q8NH74 314 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 ALG3Q92685 438 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 PIWIL1Q96J94 861 aaKnown RBP15.31■□□□□ 0.04
CHD4-210ENST00000544040 ERMAPQ96PL5 475 aaPredicted RBP15.31■□□□□ 0.04
CHD4-210ENST00000544040 GPR21Q99679 349 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 DENND2DQ9H6A0 471 aaPredicted RBP15.31■□□□□ 0.04
CHD4-210ENST00000544040 ANXA2P2A6NMY6 339 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 CCNB2O95067 398 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 ANXA2P07355 339 aaKnown RBP15.31■□□□□ 0.04
CHD4-210ENST00000544040 GRK5P34947 590 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 NAE1Q13564 534 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 CAPSQ13938 189 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 PYHIN1Q6K0P9 492 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 CHERPQ8IWX8 916 aaKnown RBP15.31■□□□□ 0.04
CHD4-210ENST00000544040 AIF1LQ9BQI0 150 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 WDR18Q9BV38 432 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 IPPKQ9H8X2 491 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 FBXW2Q9UKT8 454 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 TRAFD1O14545 582 aaPredicted RBP15.31■□□□□ 0.04
CHD4-210ENST00000544040 OCLNQ16625 522 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 TMEM214Q6NUQ4 689 aaKnown RBP15.31■□□□□ 0.04
CHD4-210ENST00000544040 PGAM4Q8N0Y7 254 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 LMLNQ96KR4 655 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 KCTD15Q96SI1 283 aaPredicted RBP15.31■□□□□ 0.04
CHD4-210ENST00000544040 GIN1Q9NXP7 522 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 GULP1Q9UBP9 304 aa15.31■□□□□ 0.04
CHD4-210ENST00000544040 ANXA4P09525 319 aaPredicted RBP15.3■□□□□ 0.04
CHD4-210ENST00000544040 ITIH1P19827 911 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 NRG3P56975 720 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 CXCL9Q07325 125 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 TOR1AIP1Q5JTV8 583 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 PDPRQ8NCN5 879 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 EZH1Q92800 747 aaPredicted RBP15.3■□□□□ 0.04
CHD4-210ENST00000544040 MFSD14AQ96MC6 490 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 CLPXO76031 633 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 CCL23P55773 120 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 ZNF558Q96NG5 402 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 GLOD4Q9HC38 313 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 MRTO4Q9UKD2 239 aaKnown RBP15.3■□□□□ 0.04
CHD4-210ENST00000544040 PDE10AQ9Y233 779 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 OR2AT4A6NND4 320 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 MFSD11O43934 449 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 MRPS6P82932 125 aaKnown RBP15.3■□□□□ 0.04
CHD4-210ENST00000544040 DNASE1L3Q13609 305 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 GTF2H2Q13888 395 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 GTF2H2CQ6P1K8 395 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 ZNF627Q7L945 461 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 ZNF781Q8N8C0 355 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 ZSCAN5AQ9BUG6 496 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 TRPS1Q9UHF7 1281 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 TLR5O60602 858 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 PSMD10O75832 226 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 ACAP2Q15057 778 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 POTEHQ6S545 545 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 ZNF557Q8N988 423 aaPredicted RBP15.3■□□□□ 0.04
CHD4-210ENST00000544040 NMUR1Q9HB89 426 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 CACNB4O00305 520 aaPredicted RBP15.3■□□□□ 0.04
CHD4-210ENST00000544040 KLRC4O43908 158 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 ORC5O43913 435 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 DDNO94850 711 aaPredicted RBP15.3■□□□□ 0.04
CHD4-210ENST00000544040 CLDN9O95484 217 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 PGAM2P15259 253 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 S100A2P29034 98 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 OR2B6P58173 313 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 NOMO2Q5JPE7 1267 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 MAP1SQ66K74 1059 aaPredicted RBP15.3■□□□□ 0.04
CHD4-210ENST00000544040 ZYG11AQ6WRX3 759 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 LNX2Q8N448 690 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 C12orf50Q8NA57 414 aaPredicted RBP15.3■□□□□ 0.04
CHD4-210ENST00000544040 HAS1Q92839 578 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 ARMC5Q96C12 935 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 LENG8Q96PV6 779 aaPredicted RBP15.3■□□□□ 0.04
CHD4-210ENST00000544040 COQ10BQ9H8M1 238 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 TVP23BQ9NYZ1 205 aa15.3■□□□□ 0.04
CHD4-210ENST00000544040 PEX16Q9Y5Y5 336 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms