RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 FCRL3Q96P31 734 aaPredicted RBP6.23□□□□□ -1.41
LTBR-212ENST00000543542 FMO2Q99518 471 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 FAM167BQ9BTA0 163 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 LRRC61Q9BV99 259 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 BOCQ9BWV1 1114 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 FAM129AQ9BZQ8 928 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 FOXP3Q9BZS1 431 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 TSPYL1Q9H0U9 437 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 CAAP1Q9H8G2 361 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 TRNAU1APQ9NX07 287 aaKnown RBP6.23□□□□□ -1.41
LTBR-212ENST00000543542 NLGN3Q9NZ94 848 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 ZFATQ9P243 1243 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 TXNDC16Q9P2K2 825 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 FTSJ1Q9UET6 329 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 GNPTGQ9UJJ9 305 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 TMPRSS11EQ9UL52 423 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 PNMA8BQ9ULN7 279 aaPredicted RBP6.23□□□□□ -1.41
LTBR-212ENST00000543542 NFU1Q9UMS0 254 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 GPR34Q9UPC5 381 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 KCNK6Q9Y257 313 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 VPS9D1Q9Y2B5 631 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 PLEKHM1Q9Y4G2 1056 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 CSNK1G3Q9Y6M4 447 aa6.23□□□□□ -1.41
LTBR-212ENST00000543542 TRBV23OR9-2A0A075B6M9 112 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 TRBV5-4A0A0C4DH59 114 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 ZCWPW2A0A1B0GU75 182 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 AGAP14A8MT82 685 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 E5RI56 91 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 E7ESA3 106 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 LMO7DNF2Z398 122 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 SLC30A4O14863 429 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 YY2O15391 372 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 SIGLEC6O43699 453 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 OR1I1O60431 355 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 POP7O75817 140 aaKnown RBP6.22□□□□□ -1.41
LTBR-212ENST00000543542 AP2A2O94973 939 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 TRIM16O95361 564 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 FUCA1P04066 466 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 ERVK-10P10266 1014 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 CD59P13987 128 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 SLC2A4P14672 509 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 ITGB6P18564 788 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 CHRM3P20309 590 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 OGNP20774 298 aaKnown RBP6.22□□□□□ -1.41
LTBR-212ENST00000543542 IDSP22304 550 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 FMO4P31512 558 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 CA5AP35218 305 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 PHBP35232 272 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 HALP42357 657 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 RPIAP49247 311 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 DUSP3P51452 185 aaPredicted RBP6.22□□□□□ -1.41
LTBR-212ENST00000543542 CTSCP53634 463 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 LIMK1P53667 647 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 CSE1LP55060 971 aaKnown RBP6.22□□□□□ -1.41
LTBR-212ENST00000543542 CTBP1Q13363 440 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 BOP1Q14137 746 aaKnown RBP6.22□□□□□ -1.41
LTBR-212ENST00000543542 KRT33BQ14525 404 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 SEMA3AQ14563 771 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 FASTKD3Q14CZ7 662 aaKnown RBP6.22□□□□□ -1.41
LTBR-212ENST00000543542 BRD3Q15059 726 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 NR0B2Q15466 257 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 KHDC1Q4VXA5 237 aaKnown RBP6.22□□□□□ -1.41
LTBR-212ENST00000543542 KCTD16Q68DU8 428 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 ZCCHC8Q6NZY4 707 aaKnown RBP6.22□□□□□ -1.41
LTBR-212ENST00000543542 ZDHHC24Q6UX98 284 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 UNC5AQ6ZN44 842 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 IGDCC3Q8IVU1 814 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 TRIM48Q8IWZ4 208 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 LMNTD2Q8IXW0 634 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 CFAP206Q8IYR0 622 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 AGGF1Q8N302 714 aaeCLIP6.22□□□□□ -1.41
LTBR-212ENST00000543542 SDR16C5Q8N3Y7 309 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 SLC25A45Q8N413 288 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 CLDN19Q8N6F1 224 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 BEND7Q8N7W2 519 aaPredicted RBP6.22□□□□□ -1.41
LTBR-212ENST00000543542 PNPLA1Q8N8W4 532 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 DEFB124Q8NES8 71 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 OR4C6Q8NH72 309 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 CCL4L1Q8NHW4 92 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 GPBAR1Q8TDU6 330 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 ELMO1Q92556 727 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 CAMK1GQ96NX5 476 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 TCF12Q99081 682 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 CDC6Q99741 560 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 TIMM29Q9BSF4 260 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 CCM2Q9BSQ5 444 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 RTKNQ9BST9 563 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 ZMYND15Q9H091 742 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 STN1Q9H668 368 aaKnown RBP6.22□□□□□ -1.41
LTBR-212ENST00000543542 SYNDIG1Q9H7V2 258 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 SARS2Q9NP81 518 aaKnown RBP6.22□□□□□ -1.41
LTBR-212ENST00000543542 FBXO6Q9NRD1 293 aaPredicted RBP6.22□□□□□ -1.41
LTBR-212ENST00000543542 INTS10Q9NVR2 710 aaKnown RBP6.22□□□□□ -1.41
LTBR-212ENST00000543542 TAAR2Q9P1P5 351 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 MARCH4Q9P2E8 410 aaPredicted RBP6.22□□□□□ -1.41
LTBR-212ENST00000543542 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.22□□□□□ -1.41
LTBR-212ENST00000543542 BTBD3Q9Y2F9 522 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 CRYL1Q9Y2S2 319 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 TEX264Q9Y6I9 313 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 DNMT3AQ9Y6K1 912 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms