RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 ZKSCAN8Q15776 578 aaPredicted RBP11.39□□□□□ -0.59
COPS7A-217ENST00000543537 QPCTQ16769 361 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 TYSND1Q2T9J0 566 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 TTC19Q6DKK2 380 aaPredicted RBP11.39□□□□□ -0.59
COPS7A-217ENST00000543537 SPATA21Q7Z572 469 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 WDR75Q8IWA0 830 aaKnown RBP11.39□□□□□ -0.59
COPS7A-217ENST00000543537 LRRC34Q8IZ02 419 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.39□□□□□ -0.59
COPS7A-217ENST00000543537 OTUD6BQ8N6M0 293 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 CCDC63Q8NA47 563 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 LPCAT1Q8NF37 534 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 OR13J1Q8NGT2 312 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 OR14C36Q8NHC7 312 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 PIP4K2CQ8TBX8 421 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 GANCQ8TET4 914 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 PDCD6IPQ8WUM4 868 aaKnown RBP11.39□□□□□ -0.59
COPS7A-217ENST00000543537 STON2Q8WXE9 905 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 CAMK1GQ96NX5 476 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 FAM111AQ96PZ2 611 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 CDC6Q99741 560 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 MRPL57Q9BQC6 102 aaKnown RBP11.39□□□□□ -0.59
COPS7A-217ENST00000543537 GPR63Q9BZJ6 419 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 SUV39H2Q9H5I1 410 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 ERVMER34-1Q9H9K5 563 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 ZFYVE1Q9HBF4 777 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 NMRAL1Q9HBL8 299 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 PREBQ9HCU5 417 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 PCMTD2Q9NV79 361 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 PIH1D1Q9NWS0 290 aaKnown RBP11.39□□□□□ -0.59
COPS7A-217ENST00000543537 TAS2R13Q9NYV9 303 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 HECAQ9UBI9 543 aaPredicted RBP11.39□□□□□ -0.59
COPS7A-217ENST00000543537 DKK3Q9UBP4 350 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 PCDHB9Q9Y5E1 797 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 SLC30A1Q9Y6M5 507 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 USH1CQ9Y6N9 552 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 FRYQ5TBA9 3013 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 A0A0J9YYE9 177 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 A0A1B0GTQ1 180 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 FAM95CA0A1B0GW59 222 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 TMEM114B3SHH9 223 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 GOLGA8RI6L899 631 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 K7ERQ8 282 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 QSOX1O00391 747 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 TRAFD1O14545 582 aaPredicted RBP11.38□□□□□ -0.59
COPS7A-217ENST00000543537 YKT6O15498 198 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 SMAD6O43541 496 aaKnown RBP11.38□□□□□ -0.59
COPS7A-217ENST00000543537 PLIN3O60664 434 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 HNRNPCL1O60812 293 aaKnown RBP11.38□□□□□ -0.59
COPS7A-217ENST00000543537 RNGTTO60942 597 aaKnown RBP11.38□□□□□ -0.59
COPS7A-217ENST00000543537 S1PR4O95977 384 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 PRLP01236 227 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 TRBC1P01850 177 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 ESR1P03372 595 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 PRNPP04156 253 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 WNT1P04628 370 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 SERPINE1P05121 402 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 CTSLP07711 333 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 CPA3P15088 417 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 CREB1P16220 341 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 ZNF7P17097 686 aaPredicted RBP11.38□□□□□ -0.59
COPS7A-217ENST00000543537 CD38P28907 300 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 SLC1A2P43004 574 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 GRK6P43250 576 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 RXRGP48443 463 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 CCT8P50990 548 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 STC1P52823 247 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 METAP1P53582 386 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 TAS2R38P59533 333 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 ATP6V0D1P61421 351 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 CNTN1Q12860 1018 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 STX3Q13277 289 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 ACAP2Q15057 778 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 ST3GAL2Q16842 350 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 ACCSLQ4AC99 568 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 PIP5KL1Q5T9C9 394 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 LRRC8EQ6NSJ5 796 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 C22orf39Q6P5X5 142 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 CES3Q6UWW8 571 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 UNQ6494/PRO21346Q6UXR6 183 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.38□□□□□ -0.59
COPS7A-217ENST00000543537 CCDC121Q6ZUS5 278 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 KDELC2Q7Z4H8 507 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 CLEC14AQ86T13 490 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 CRLF3Q8IUI8 442 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 SLC22A9Q8IVM8 553 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 AFAP1L2Q8N4X5 818 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 NKAPQ8N5F7 415 aaKnown RBP11.38□□□□□ -0.59
COPS7A-217ENST00000543537 MFSD2AQ8NA29 543 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 GDAP1Q8TB36 358 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 PIH1D2Q8WWB5 315 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 ULK4Q96C45 1275 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 ECHDC3Q96DC8 303 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 SLC6A18Q96N87 628 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 AGAP2Q99490 1192 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 ELF4Q99607 663 aaPredicted RBP11.38□□□□□ -0.59
COPS7A-217ENST00000543537 HEPHQ9BQS7 1158 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 TSSK1BQ9BXA7 367 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 HDAC8Q9BY41 377 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 TOR4AQ9NXH8 423 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 SLC39A10Q9ULF5 831 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms