RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 GPRC6AQ5T6X5 926 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 ARHGAP40Q5TG30 622 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 AGAP9Q5VTM2 703 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 ABRAXAS1Q6UWZ7 409 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 ARHGEF18Q6ZSZ5 1173 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 RBM12BQ8IXT5 1001 aaKnown RBP17.18■□□□□ 0.34
LTBR-210ENST00000542830 KLHDC8BQ8IXV7 354 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 ZNF398Q8TD17 642 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 TAAR9Q96RI9 348 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 CCNL2Q96S94 520 aaPredicted RBP17.18■□□□□ 0.34
LTBR-210ENST00000542830 TBL1YQ9BQ87 522 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 APOL2Q9BQE5 337 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 UGT1A7Q9HAW7 530 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 UGT1A10Q9HAW8 530 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 UGT1A8Q9HAW9 530 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 POT1Q9NUX5 634 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 CAPN6Q9Y6Q1 641 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 BPTFQ12830 3046 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 A0A0U1RQJ8 604 aa17.17■□□□□ 0.34
LTBR-210ENST00000542830 K7ENP7 123 aa17.17■□□□□ 0.34
LTBR-210ENST00000542830 TK2O00142 265 aa17.17■□□□□ 0.34
LTBR-210ENST00000542830 GAPDHSO14556 408 aaPredicted RBP17.17■□□□□ 0.34
LTBR-210ENST00000542830 PRAMEF1O95521 474 aa17.17■□□□□ 0.34
LTBR-210ENST00000542830 CCL4P13236 92 aa17.17■□□□□ 0.34
LTBR-210ENST00000542830 MPSTP25325 297 aa17.17■□□□□ 0.34
LTBR-210ENST00000542830 DMPKQ09013 629 aa17.17■□□□□ 0.34
LTBR-210ENST00000542830 LONRF2Q1L5Z9 754 aa17.17■□□□□ 0.34
LTBR-210ENST00000542830 P3H1Q32P28 736 aa17.17■□□□□ 0.34
LTBR-210ENST00000542830 INO80CQ6PI98 192 aaPredicted RBP17.17■□□□□ 0.34
LTBR-210ENST00000542830 IGSF10Q6WRI0 2623 aa17.17■□□□□ 0.34
LTBR-210ENST00000542830 CCDC81Q6ZN84 652 aa17.17■□□□□ 0.34
LTBR-210ENST00000542830 TMEM26Q6ZUK4 368 aa17.17■□□□□ 0.34
LTBR-210ENST00000542830 C11orf96Q7Z7L8 435 aa17.17■□□□□ 0.34
LTBR-210ENST00000542830 AMZ2Q86W34 360 aa17.17■□□□□ 0.34
LTBR-210ENST00000542830 OR4K2Q8NGD2 314 aa17.17■□□□□ 0.34
LTBR-210ENST00000542830 NCSTNQ92542 709 aa17.17■□□□□ 0.34
LTBR-210ENST00000542830 ZNF514Q96K75 400 aaPredicted RBP17.17■□□□□ 0.34
LTBR-210ENST00000542830 BBC3Q96PG8 261 aaPredicted RBP17.17■□□□□ 0.34
LTBR-210ENST00000542830 ARNT2Q9HBZ2 717 aa17.17■□□□□ 0.34
LTBR-210ENST00000542830 TMEM9Q9P0T7 183 aa17.17■□□□□ 0.34
LTBR-210ENST00000542830 PCDHB11Q9Y5F2 797 aa17.17■□□□□ 0.34
LTBR-210ENST00000542830 PCDHGA3Q9Y5H0 932 aa17.17■□□□□ 0.34
LTBR-210ENST00000542830 B4E171 279 aa17.16■□□□□ 0.34
LTBR-210ENST00000542830 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.16■□□□□ 0.34
LTBR-210ENST00000542830 ERVH48-1M5A8F1 160 aa17.16■□□□□ 0.34
LTBR-210ENST00000542830 ATXN7O15265 892 aaPredicted RBP17.16■□□□□ 0.34
LTBR-210ENST00000542830 ARHGAP6O43182 974 aa17.16■□□□□ 0.34
LTBR-210ENST00000542830 POP7O75817 140 aaKnown RBP17.16■□□□□ 0.34
LTBR-210ENST00000542830 SRP72O76094 671 aaKnown RBP17.16■□□□□ 0.34
LTBR-210ENST00000542830 FGF3P11487 239 aaPredicted RBP17.16■□□□□ 0.34
LTBR-210ENST00000542830 MSH3P20585 1137 aa17.16■□□□□ 0.34
LTBR-210ENST00000542830 AKT1P31749 480 aa17.16■□□□□ 0.34
LTBR-210ENST00000542830 HADHAP40939 763 aa17.16■□□□□ 0.34
LTBR-210ENST00000542830 SLC19A1P41440 591 aa17.16■□□□□ 0.34
LTBR-210ENST00000542830 TSPAN7P41732 249 aa17.16■□□□□ 0.34
LTBR-210ENST00000542830 HALP42357 657 aa17.16■□□□□ 0.34
LTBR-210ENST00000542830 MAPK9P45984 424 aa17.16■□□□□ 0.34
LTBR-210ENST00000542830 RAB15P59190 212 aa17.16■□□□□ 0.34
LTBR-210ENST00000542830 SEPT7Q16181 437 aaKnown RBP17.16■□□□□ 0.34
LTBR-210ENST00000542830 SEL1L2Q5TEA6 688 aa17.16■□□□□ 0.34
LTBR-210ENST00000542830 PLXDC1Q8IUK5 500 aa17.16■□□□□ 0.34
LTBR-210ENST00000542830 RASGEF1AQ8N9B8 481 aa17.16■□□□□ 0.34
LTBR-210ENST00000542830 FAM71DQ8N9W8 422 aa17.16■□□□□ 0.34
LTBR-210ENST00000542830 SLC35B2Q8TB61 432 aa17.16■□□□□ 0.34
LTBR-210ENST00000542830 CXorf40BQ96DE9 158 aa17.16■□□□□ 0.34
LTBR-210ENST00000542830 DDA1Q9BW61 102 aa17.16■□□□□ 0.34
LTBR-210ENST00000542830 TBC1D10AQ9BXI6 508 aa17.16■□□□□ 0.34
LTBR-210ENST00000542830 ASPSCR1Q9BZE9 553 aa17.16■□□□□ 0.34
LTBR-210ENST00000542830 ASB8Q9H765 288 aa17.16■□□□□ 0.34
LTBR-210ENST00000542830 LRRC40Q9H9A6 602 aa17.16■□□□□ 0.34
LTBR-210ENST00000542830 FOXJ2Q9P0K8 574 aa17.16■□□□□ 0.34
LTBR-210ENST00000542830 SCHIP1Q9P0W5 487 aaPredicted RBP17.16■□□□□ 0.34
LTBR-210ENST00000542830 LOC400499M0QZD8 3231 aa17.16■□□□□ 0.34
LTBR-210ENST00000542830 KLHL33A6NCF5 533 aa17.15■□□□□ 0.34
LTBR-210ENST00000542830 EFCAB7A8K855 629 aa17.15■□□□□ 0.34
LTBR-210ENST00000542830 GPR39O43194 453 aa17.15■□□□□ 0.34
LTBR-210ENST00000542830 PSMD3O43242 534 aa17.15■□□□□ 0.34
LTBR-210ENST00000542830 RPL10P27635 214 aaKnown RBP17.15■□□□□ 0.34
LTBR-210ENST00000542830 CTSCP53634 463 aa17.15■□□□□ 0.34
LTBR-210ENST00000542830 MSLNQ13421 630 aaPredicted RBP17.15■□□□□ 0.34
LTBR-210ENST00000542830 OLIG2Q13516 323 aa17.15■□□□□ 0.34
LTBR-210ENST00000542830 PTPRCAPQ14761 206 aa17.15■□□□□ 0.34
LTBR-210ENST00000542830 SNAP47Q5SQN1 464 aa17.15■□□□□ 0.34
LTBR-210ENST00000542830 KCTD11Q693B1 232 aa17.15■□□□□ 0.34
LTBR-210ENST00000542830 TMEM220Q6QAJ8 160 aa17.15■□□□□ 0.34
LTBR-210ENST00000542830 ARHGAP22Q7Z5H3 698 aa17.15■□□□□ 0.34
LTBR-210ENST00000542830 ULK4Q96C45 1275 aa17.15■□□□□ 0.34
LTBR-210ENST00000542830 FRMD8P1Q9BZ68 369 aaPredicted RBP17.15■□□□□ 0.34
LTBR-210ENST00000542830 WDR70Q9NW82 654 aa17.15■□□□□ 0.34
LTBR-210ENST00000542830 SLC39A1Q9NY26 324 aa17.15■□□□□ 0.34
LTBR-210ENST00000542830 ZNF624Q9P2J8 865 aaPredicted RBP17.15■□□□□ 0.34
LTBR-210ENST00000542830 FKBPLQ9UIM3 349 aa17.15■□□□□ 0.34
LTBR-210ENST00000542830 GUCA1BQ9UMX6 200 aa17.15■□□□□ 0.34
LTBR-210ENST00000542830 R3HDM2Q9Y2K5 976 aaKnown RBP17.15■□□□□ 0.34
LTBR-210ENST00000542830 MN1Q10571 1320 aaPredicted RBP17.15■□□□□ 0.34
LTBR-210ENST00000542830 OR2AG2A6NM03 316 aa17.14■□□□□ 0.33
LTBR-210ENST00000542830 STMND1H3BQB6 276 aa17.14■□□□□ 0.33
LTBR-210ENST00000542830 UBXN7O94888 489 aa17.14■□□□□ 0.33
LTBR-210ENST00000542830 RALBP11234 206 aa17.14■□□□□ 0.33
LTBR-210ENST00000542830 BRAFP15056 766 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms