RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 ZNF778Q96MU6 729 aa11.33□□□□□ -0.6
C2CD3-217ENST00000542452 OSBPL9Q96SU4 736 aa11.33□□□□□ -0.6
C2CD3-217ENST00000542452 C19orf43Q9BQ61 176 aa11.33□□□□□ -0.6
C2CD3-217ENST00000542452 AP1M1Q9BXS5 423 aa11.33□□□□□ -0.6
C2CD3-217ENST00000542452 POLR1BQ9H9Y6 1135 aa11.33□□□□□ -0.6
C2CD3-217ENST00000542452 SARS2Q9NP81 518 aaKnown RBP11.33□□□□□ -0.6
C2CD3-217ENST00000542452 EIF2B3Q9NR50 452 aaKnown RBP11.33□□□□□ -0.6
C2CD3-217ENST00000542452 ZNF624Q9P2J8 865 aaPredicted RBP11.33□□□□□ -0.6
C2CD3-217ENST00000542452 CRLS1Q9UJA2 301 aa11.33□□□□□ -0.6
C2CD3-217ENST00000542452 URB1O60287 2271 aaKnown RBP11.33□□□□□ -0.6
C2CD3-217ENST00000542452 IGLV3-16A0A075B6K0 115 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 CCDC187A0A096LP49 1063 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 OR52A4PA6NMU1 304 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 ZSCAN12O43309 604 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 DXOO77932 396 aaKnown RBP11.32□□□□□ -0.6
C2CD3-217ENST00000542452 HOXB3P14651 431 aaPredicted RBP11.32□□□□□ -0.6
C2CD3-217ENST00000542452 MSH3P20585 1137 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 ITGALP20701 1170 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 ACRV1P26436 265 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 RPL10P27635 214 aaKnown RBP11.32□□□□□ -0.6
C2CD3-217ENST00000542452 ALDH4A1P30038 563 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 FOXN2P32314 431 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 ETV5P41161 510 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 SLC19A1P41440 591 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 LSSP48449 732 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 PDE1BQ01064 536 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 HHEXQ03014 270 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 DMPKQ09013 629 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 CLCA4Q14CN2 919 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 C16orf72Q14CZ0 275 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 TRIP13Q15645 432 aaPredicted RBP11.32□□□□□ -0.6
C2CD3-217ENST00000542452 DBN1Q16643 649 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 CYP1B1Q16678 543 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 ZNF658BQ4V348 819 aaPredicted RBP11.32□□□□□ -0.6
C2CD3-217ENST00000542452 BCL7AQ4VC05 210 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 PPP1R21Q6ZMI0 780 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 USP53Q70EK8 1073 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 LINC00523Q86TU6 105 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 SERPINA9Q86WD7 417 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 SNIP1Q8TAD8 396 aaKnown RBP11.32□□□□□ -0.6
C2CD3-217ENST00000542452 STYXQ8WUJ0 223 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 MAIP1Q8WWC4 291 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 SGF29Q96ES7 293 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 CRELD1Q96HD1 420 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 CDKN2AIPNLQ96HQ2 116 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 PBKQ96KB5 322 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 RANBP9Q96S59 729 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 TBC1D10AQ9BXI6 508 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 ZCCHC2Q9C0B9 1178 aaKnown RBP11.32□□□□□ -0.6
C2CD3-217ENST00000542452 KCNK4Q9NYG8 393 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 OGFRQ9NZT2 677 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 CPNE7Q9UBL6 633 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 TTC7AQ9ULT0 858 aaPredicted RBP11.32□□□□□ -0.6
C2CD3-217ENST00000542452 NEU2Q9Y3R4 380 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 LOXL2Q9Y4K0 774 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 PRSS21Q9Y6M0 314 aa11.32□□□□□ -0.6
C2CD3-217ENST00000542452 KIR2DS5A0A0G2JLQ3 304 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 A0A0G2JNG1 304 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 IGHV5-10-1A0A0J9YXX1 117 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 CCDC162PA2VCL2 907 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 PDZK1P1A8MUH7 402 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 KIR2DS3K7RE56 304 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 PGRMC1O00264 195 aaKnown RBP11.31□□□□□ -0.6
C2CD3-217ENST00000542452 POP7O75817 140 aaKnown RBP11.31□□□□□ -0.6
C2CD3-217ENST00000542452 TMEM63AO94886 807 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 CPNE6O95741 557 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 APRTP07741 180 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 THRAP10827 490 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 ITIH1P19827 911 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 MPSTP25325 297 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 HADHAP40939 763 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 GPR3P46089 330 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 LMAN1P49257 510 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 PRLHRP49683 370 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 VPS41P49754 854 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 TERF1P54274 439 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 BASP1P80723 227 aaKnown RBP11.31□□□□□ -0.6
C2CD3-217ENST00000542452 ACVR1Q04771 509 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 SEMA3AQ14563 771 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 KCNJ11Q14654 390 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 KIR2DS5Q14953 304 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 ZRANB3Q5FWF4 1079 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 FNBP1LQ5T0N5 605 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 TSTD2Q5T7W7 516 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 AGAP9Q5VTM2 703 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 ANKRD22Q5VYY1 191 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 DUS1LQ6P1R4 473 aaKnown RBP11.31□□□□□ -0.6
C2CD3-217ENST00000542452 FOXR1Q6PIV2 292 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 IGF2-ASQ6U949 168 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 ABRAXAS1Q6UWZ7 409 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 SLC9B2Q86UD5 537 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 DNAAF3Q8N9W5 541 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 RCBTB1Q8NDN9 531 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 WDR36Q8NI36 951 aaKnown RBP11.31□□□□□ -0.6
C2CD3-217ENST00000542452 PMEPA1Q969W9 287 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 ULK4Q96C45 1275 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 LRRC45Q96CN5 670 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 CCDC74BQ96LY2 380 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 ZDHHC3Q9NYG2 299 aa11.31□□□□□ -0.6
C2CD3-217ENST00000542452 FAM8A1Q9UBU6 413 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms