RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 UNC5CO95185 931 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 ZNF37AP17032 561 aaPredicted RBP8.59□□□□□ -1.03
THBS3-210ENST00000541576 CHRM3P20309 590 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 DRD1P21728 446 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 RPS3P23396 243 aaKnown RBP eCLIP8.59□□□□□ -1.03
THBS3-210ENST00000541576 NTSR1P30989 418 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 PFKPQ01813 784 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 STARD3Q14849 445 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 ACOX1Q15067 660 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 PRPF38BQ5VTL8 546 aaKnown RBP8.59□□□□□ -1.03
THBS3-210ENST00000541576 ATG16L1Q676U5 607 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 CACUL1Q86Y37 369 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 PPP1R14CQ8TAE6 165 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 RAB3IL1Q8TBN0 382 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 KCNJ9Q92806 393 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 MOCOSQ96EN8 888 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 GPR21Q99679 349 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 BOCQ9BWV1 1114 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 TSSK1BQ9BXA7 367 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 MRPL46Q9H2W6 279 aaKnown RBP8.59□□□□□ -1.03
THBS3-210ENST00000541576 SYTL2Q9HCH5 934 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 NFKBIL1Q9UBC1 381 aaPredicted RBP8.59□□□□□ -1.03
THBS3-210ENST00000541576 COL4A2P08572 1712 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 ITM2AO43736 263 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 CD9P21926 228 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 ARRB2P32121 409 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 P2RY2P41231 377 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 CNTN1Q12860 1018 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 ZNF284Q2VY69 593 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 PTRHD1Q6GMV3 140 aaKnown RBP8.59□□□□□ -1.03
THBS3-210ENST00000541576 TECPR1Q7Z6L1 1165 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 MTDHQ86UE4 582 aaKnown RBP8.59□□□□□ -1.03
THBS3-210ENST00000541576 OR6Y1Q8NGX8 325 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 RDH11Q8TC12 318 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 STMN2Q93045 179 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 RAB7BQ96AH8 199 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 GUCD1Q96NT3 240 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 COPS8Q99627 209 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 MRPL57Q9BQC6 102 aaKnown RBP8.59□□□□□ -1.03
THBS3-210ENST00000541576 RIOK2Q9BVS4 552 aaKnown RBP8.59□□□□□ -1.03
THBS3-210ENST00000541576 ACSS2Q9NR19 701 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 ZDHHC3Q9NYG2 299 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 TRMT6Q9UJA5 497 aaKnown RBP8.59□□□□□ -1.03
THBS3-210ENST00000541576 GNPTGQ9UJJ9 305 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 OAS3Q9Y6K5 1087 aaKnown RBP8.59□□□□□ -1.03
THBS3-210ENST00000541576 PIKFYVEQ9Y2I7 2098 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 WNT9AO14904 365 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 MID1O15344 667 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 NARSO43776 548 aaKnown RBP8.58□□□□□ -1.04
THBS3-210ENST00000541576 ADH1BP00325 375 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 MYL2P10916 166 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 SKIV2L2P42285 1042 aaKnown RBP8.58□□□□□ -1.04
THBS3-210ENST00000541576 NSG1P42857 185 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 KCNC1P48547 511 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 MRPS35P82673 323 aaKnown RBP8.58□□□□□ -1.04
THBS3-210ENST00000541576 OCRLQ01968 901 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 KPNB1Q14974 876 aaKnown RBP8.58□□□□□ -1.04
THBS3-210ENST00000541576 ACAP2Q15057 778 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 CST6Q15828 149 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 LEXMQ3ZCV2 418 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 IER5LQ5T953 404 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 PTCRAQ6ISU1 281 aaPredicted RBP8.58□□□□□ -1.04
THBS3-210ENST00000541576 PAQR3Q6TCH7 311 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 NAPRTQ6XQN6 538 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 TRAM1L1Q8N609 369 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 CLDN19Q8N6F1 224 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 IL17RCQ8NAC3 791 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 SREK1Q8WXA9 508 aaKnown RBP8.58□□□□□ -1.04
THBS3-210ENST00000541576 SGF29Q96ES7 293 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 SLC30A3Q99726 388 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 GABRG3Q99928 467 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 ZSCAN5AQ9BUG6 496 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 ABCG8Q9H221 673 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 TXLNGQ9NUQ3 528 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 SMOXQ9NWM0 555 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 IQCF5A8MTL0 148 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 H3BMM5 538 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 PFDN1O60925 122 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 SNNO75324 88 aaPredicted RBP8.58□□□□□ -1.04
THBS3-210ENST00000541576 LYPLA1O75608 230 aaPredicted RBP8.58□□□□□ -1.04
THBS3-210ENST00000541576 KLF8O95600 359 aaPredicted RBP8.58□□□□□ -1.04
THBS3-210ENST00000541576 RBP1P09455 135 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 GLULP15104 373 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 RASSF2P50749 326 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 STX3Q13277 289 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 HENMT1Q5T8I9 393 aaKnown RBP8.58□□□□□ -1.04
THBS3-210ENST00000541576 PIP5KL1Q5T9C9 394 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 ZNF776Q68DI1 518 aaPredicted RBP8.58□□□□□ -1.04
THBS3-210ENST00000541576 UGT3A1Q6NUS8 523 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 KIAA1211LQ6NV74 962 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 ZYG11AQ6WRX3 759 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 TRMT11Q7Z4G4 463 aaKnown RBP8.58□□□□□ -1.04
THBS3-210ENST00000541576 RAVER1Q8IY67 606 aaKnown RBP8.58□□□□□ -1.04
THBS3-210ENST00000541576 NRSN1Q8IZ57 195 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 GBP7Q8N8V2 638 aaPredicted RBP8.58□□□□□ -1.04
THBS3-210ENST00000541576 SIDT2Q8NBJ9 832 aaKnown RBP8.58□□□□□ -1.04
THBS3-210ENST00000541576 TXNDC5Q8NBS9 432 aaKnown RBP8.58□□□□□ -1.04
THBS3-210ENST00000541576 OR2T3Q8NH03 318 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 GRAMD1AQ96CP6 724 aa8.58□□□□□ -1.04
THBS3-210ENST00000541576 AP2M1Q96CW1 435 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms