RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 USP29Q9HBJ7 922 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 ECHDC1Q9NTX5 307 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 PRMT7Q9NVM4 692 aaPredicted RBP5.51□□□□□ -1.53
DDB1-219ENST00000541513 ING3Q9NXR8 418 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 KIAA1456Q9P272 454 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 HDAC6Q9UBN7 1215 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 MAD2L2Q9UI95 211 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 FBXW11Q9UKB1 542 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 GMEB2Q9UKD1 530 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 DNPEPQ9ULA0 475 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 SLC12A4Q9UP95 1085 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 CMAHPQ9Y471 501 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 TRPM7Q96QT4 1865 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 MAST3O60307 1309 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 UBE4BO95155 1302 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 PITPNM2Q9BZ72 1349 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 A0A1W2PQJ5 194 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 C5orf51A6NDU8 294 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 CFAP73A6NFT4 308 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 NCF1BA6NI72 391 aaPredicted RBP5.5□□□□□ -1.53
DDB1-219ENST00000541513 C3orf70A6NLC5 250 aaPredicted RBP5.5□□□□□ -1.53
DDB1-219ENST00000541513 NCF1CA8MVU1 366 aaPredicted RBP5.5□□□□□ -1.53
DDB1-219ENST00000541513 USP17L23D6RBM5 183 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 PIK3R2O00459 728 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 PLRG1O43660 514 aaKnown RBP5.5□□□□□ -1.53
DDB1-219ENST00000541513 MOSPD3O75425 235 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 SLC25A12O75746 678 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 DDNO94850 711 aaPredicted RBP5.5□□□□□ -1.53
DDB1-219ENST00000541513 AGFG2O95081 481 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 ENO1P06733 434 aaKnown RBP5.5□□□□□ -1.53
DDB1-219ENST00000541513 RHOP08100 348 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 FGF4P08620 206 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 DLATP10515 647 aaKnown RBP5.5□□□□□ -1.53
DDB1-219ENST00000541513 BMP3P12645 472 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 LYL1P12980 280 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 ZNF24P17028 368 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 PRKCAP17252 672 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 GNAT2P19087 354 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 MX1P20591 662 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 YY1P25490 414 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 PSMA5P28066 241 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 CDAP32320 146 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 PBX1P40424 430 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 WNT5AP41221 380 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 GMPSP49915 693 aaPredicted RBP5.5□□□□□ -1.53
DDB1-219ENST00000541513 PRKAG1P54619 331 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 TAS2R50P59544 299 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 UBE2HP62256 183 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 ATP2C1P98194 919 aaPredicted RBP5.5□□□□□ -1.53
DDB1-219ENST00000541513 ACSM2AQ08AH3 577 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 GRSF1Q12849 480 aaKnown RBP eCLIP5.5□□□□□ -1.53
DDB1-219ENST00000541513 OVGP1Q12889 678 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 PDZK1IP1Q13113 114 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 BYSLQ13895 437 aaKnown RBP5.5□□□□□ -1.53
DDB1-219ENST00000541513 NEDD9Q14511 834 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 KARSQ15046 597 aaKnown RBP5.5□□□□□ -1.53
DDB1-219ENST00000541513 NFKBIBQ15653 356 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 SNAPC1Q16533 368 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 HADHQ16836 314 aaKnown RBP5.5□□□□□ -1.53
DDB1-219ENST00000541513 FAM187BQ17R55 369 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 ERCC6LQ2NKX8 1250 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 CR1LQ2VPA4 569 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 EPC2Q52LR7 807 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 GLE1Q53GS7 698 aaKnown RBP5.5□□□□□ -1.53
DDB1-219ENST00000541513 FBXO48Q5FWF7 155 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 ACSM2BQ68CK6 577 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 RAET1GQ6H3X3 334 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 PAPD4Q6PIY7 484 aaKnown RBP5.5□□□□□ -1.53
DDB1-219ENST00000541513 B3GNT6Q6ZMB0 384 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 FAM20CQ8IXL6 584 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 TMEFF1Q8IYR6 380 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 CERS5Q8N5B7 392 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 EIF1ADQ8N9N8 165 aaKnown RBP5.5□□□□□ -1.53
DDB1-219ENST00000541513 PDPRQ8NCN5 879 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 SLC17A8Q8NDX2 589 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 STEAP2Q8NFT2 490 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 OR2T34Q8NGX1 318 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.5□□□□□ -1.53
DDB1-219ENST00000541513 CLEC4CQ8WTT0 213 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 RAPGEF5Q92565 580 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 EXT2Q93063 718 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 CCDC51Q96ER9 411 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 TPD52L3Q96J77 140 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 C8orf76Q96K31 380 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 MEGF10Q96KG7 1140 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 NSMCE2Q96MF7 247 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 ZNF558Q96NG5 402 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 PLIN2Q99541 437 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 ZBTB18Q99592 522 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 GAL3ST1Q99999 423 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 H2AFJQ9BTM1 129 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 ABHD6Q9BV23 337 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 EDEM2Q9BV94 578 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 MRIQ9BWK5 157 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 AKTIPQ9H8T0 292 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 FAM114A2Q9NRY5 505 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 TBC1D7Q9P0N9 293 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 RBPJLQ9UBG7 517 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 KLQ9UEF7 1012 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms