RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 DGKAP23743 735 aa17.28■□□□□ 0.36
CLSTN3-210ENST00000540931 GNPDA1P46926 289 aa17.28■□□□□ 0.36
CLSTN3-210ENST00000540931 MGAT5Q09328 741 aa17.28■□□□□ 0.36
CLSTN3-210ENST00000540931 NAB1Q13506 487 aa17.28■□□□□ 0.36
CLSTN3-210ENST00000540931 DBN1Q16643 649 aa17.28■□□□□ 0.36
CLSTN3-210ENST00000540931 TCEAL6Q6IPX3 200 aa17.28■□□□□ 0.36
CLSTN3-210ENST00000540931 PSAPL1Q6NUJ1 521 aa17.28■□□□□ 0.36
CLSTN3-210ENST00000540931 C3orf62Q6ZUJ4 267 aa17.28■□□□□ 0.36
CLSTN3-210ENST00000540931 RD3Q7Z3Z2 195 aa17.28■□□□□ 0.36
CLSTN3-210ENST00000540931 SLC26A11Q86WA9 606 aa17.28■□□□□ 0.36
CLSTN3-210ENST00000540931 CNTN4Q8IWV2 1026 aa17.28■□□□□ 0.36
CLSTN3-210ENST00000540931 OR6C4Q8NGE1 309 aa17.28■□□□□ 0.36
CLSTN3-210ENST00000540931 GPBAR1Q8TDU6 330 aa17.28■□□□□ 0.36
CLSTN3-210ENST00000540931 TCEAL3Q969E4 200 aa17.28■□□□□ 0.36
CLSTN3-210ENST00000540931 TSACCQ96A04 125 aaPredicted RBP17.28■□□□□ 0.36
CLSTN3-210ENST00000540931 CFAP36Q96G28 342 aa17.28■□□□□ 0.36
CLSTN3-210ENST00000540931 PPANQ9NQ55 473 aaKnown RBP17.28■□□□□ 0.36
CLSTN3-210ENST00000540931 ZFATQ9P243 1243 aa17.28■□□□□ 0.36
CLSTN3-210ENST00000540931 TXNDC16Q9P2K2 825 aa17.28■□□□□ 0.36
CLSTN3-210ENST00000540931 GNPTGQ9UJJ9 305 aa17.28■□□□□ 0.36
CLSTN3-210ENST00000540931 CNOT1A5YKK6 2376 aaKnown RBP17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 CDX4O14627 284 aaPredicted RBP17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 ZW10O43264 779 aa17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 ARNTP27540 789 aa17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 RPIAP49247 311 aa17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 CARSP49589 748 aaKnown RBP17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 PRLHRP49683 370 aa17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 DUSP3P51452 185 aaPredicted RBP17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 DMPKQ09013 629 aa17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 INSCQ1MX18 579 aa17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 STPG1Q5TH74 334 aa17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 ZNF470Q6ECI4 717 aa17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 WDR93Q6P2C0 686 aa17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 TMEM220Q6QAJ8 160 aa17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 CES3Q6UWW8 571 aa17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 TRMT10CQ7L0Y3 403 aaKnown RBP17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 AMZ2Q86W34 360 aa17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 ANKMY2Q8IV38 441 aa17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 ZNF548Q8NEK5 533 aaPredicted RBP17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 PDXPQ96GD0 296 aa17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 FCRL3Q96P31 734 aaPredicted RBP17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 CDC6Q99741 560 aa17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 SMOC1Q9H4F8 434 aa17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 SLC32A1Q9H598 525 aa17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 MOCS1Q9NZB8 636 aa17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 TMPRSS11EQ9UL52 423 aa17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 ACSL5Q9ULC5 683 aa17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 OAS3Q9Y6K5 1087 aaKnown RBP17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 CHD6Q8TD26 2715 aa17.27■□□□□ 0.36
CLSTN3-210ENST00000540931 ZFHX4Q86UP3 3567 aa17.26■□□□□ 0.35
CLSTN3-210ENST00000540931 MGAT4DA6NG13 374 aa17.26■□□□□ 0.35
CLSTN3-210ENST00000540931 CCL22O00626 93 aa17.26■□□□□ 0.35
CLSTN3-210ENST00000540931 LEPRP48357 1165 aaKnown RBP17.26■□□□□ 0.35
CLSTN3-210ENST00000540931 RPA4Q13156 261 aa17.26■□□□□ 0.35
CLSTN3-210ENST00000540931 ST3GAL2Q16842 350 aa17.26■□□□□ 0.35
CLSTN3-210ENST00000540931 HSP90AA5PQ58FG0 334 aa17.26■□□□□ 0.35
CLSTN3-210ENST00000540931 PPM1JQ5JR12 505 aa17.26■□□□□ 0.35
CLSTN3-210ENST00000540931 TPRG1LQ5T0D9 272 aa17.26■□□□□ 0.35
CLSTN3-210ENST00000540931 UGT3A1Q6NUS8 523 aa17.26■□□□□ 0.35
CLSTN3-210ENST00000540931 ZCCHC8Q6NZY4 707 aaKnown RBP17.26■□□□□ 0.35
CLSTN3-210ENST00000540931 WASH2PQ6VEQ5 465 aa17.26■□□□□ 0.35
CLSTN3-210ENST00000540931 TAF8Q7Z7C8 310 aa17.26■□□□□ 0.35
CLSTN3-210ENST00000540931 TRIM74Q86UV6 250 aa17.26■□□□□ 0.35
CLSTN3-210ENST00000540931 PIANPQ8IYJ0 282 aa17.26■□□□□ 0.35
CLSTN3-210ENST00000540931 AGGF1Q8N302 714 aaeCLIP17.26■□□□□ 0.35
CLSTN3-210ENST00000540931 RASGEF1AQ8N9B8 481 aa17.26■□□□□ 0.35
CLSTN3-210ENST00000540931 OR2L2Q8NH16 312 aa17.26■□□□□ 0.35
CLSTN3-210ENST00000540931 LMX1AQ8TE12 382 aa17.26■□□□□ 0.35
CLSTN3-210ENST00000540931 CCM2Q9BSQ5 444 aa17.26■□□□□ 0.35
CLSTN3-210ENST00000540931 LRRC61Q9BV99 259 aa17.26■□□□□ 0.35
CLSTN3-210ENST00000540931 FAM96AQ9H5X1 160 aa17.26■□□□□ 0.35
CLSTN3-210ENST00000540931 WASH6PQ9NQA3 447 aa17.26■□□□□ 0.35
CLSTN3-210ENST00000540931 FBXO5Q9UKT4 447 aa17.26■□□□□ 0.35
CLSTN3-210ENST00000540931 NFU1Q9UMS0 254 aa17.26■□□□□ 0.35
CLSTN3-210ENST00000540931 MYLKQ15746 1914 aa17.25■□□□□ 0.35
CLSTN3-210ENST00000540931 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.25■□□□□ 0.35
CLSTN3-210ENST00000540931 OR51F1A6NGY5 319 aa17.25■□□□□ 0.35
CLSTN3-210ENST00000540931 LIN7AO14910 233 aaPredicted RBP17.25■□□□□ 0.35
CLSTN3-210ENST00000540931 CDK4P11802 303 aa17.25■□□□□ 0.35
CLSTN3-210ENST00000540931 IDSP22304 550 aa17.25■□□□□ 0.35
CLSTN3-210ENST00000540931 POLD2P49005 469 aa17.25■□□□□ 0.35
CLSTN3-210ENST00000540931 TRADDQ15628 312 aa17.25■□□□□ 0.35
CLSTN3-210ENST00000540931 KCTD19Q17RG1 926 aaPredicted RBP17.25■□□□□ 0.35
CLSTN3-210ENST00000540931 MAP9Q49MG5 647 aa17.25■□□□□ 0.35
CLSTN3-210ENST00000540931 PTRHD1Q6GMV3 140 aaKnown RBP17.25■□□□□ 0.35
CLSTN3-210ENST00000540931 MARK2Q7KZI7 788 aaKnown RBP17.25■□□□□ 0.35
CLSTN3-210ENST00000540931 CHST15Q7LFX5 561 aaPredicted RBP17.25■□□□□ 0.35
CLSTN3-210ENST00000540931 FAM181AQ8N9Y4 354 aa17.25■□□□□ 0.35
CLSTN3-210ENST00000540931 C2CD4AQ8NCU7 369 aaPredicted RBP17.25■□□□□ 0.35
CLSTN3-210ENST00000540931 OR4C6Q8NH72 309 aa17.25■□□□□ 0.35
CLSTN3-210ENST00000540931 HM13Q8TCT9 377 aa17.25■□□□□ 0.35
CLSTN3-210ENST00000540931 STN1Q9H668 368 aaKnown RBP17.25■□□□□ 0.35
CLSTN3-210ENST00000540931 MRPL40Q9NQ50 206 aaKnown RBP17.25■□□□□ 0.35
CLSTN3-210ENST00000540931 KLHL42Q9P2K6 505 aa17.25■□□□□ 0.35
CLSTN3-210ENST00000540931 C4orf47A7E2U8 309 aa17.24■□□□□ 0.35
CLSTN3-210ENST00000540931 MTX2O75431 263 aa17.24■□□□□ 0.35
CLSTN3-210ENST00000540931 POP7O75817 140 aaKnown RBP17.24■□□□□ 0.35
CLSTN3-210ENST00000540931 ACTR1BP42025 376 aa17.24■□□□□ 0.35
CLSTN3-210ENST00000540931 SKIV2L2P42285 1042 aaKnown RBP17.24■□□□□ 0.35
CLSTN3-210ENST00000540931 HALP42357 657 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms