RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 SLC22A17Q8WUG5 538 aa13.61□□□□□ -0.23
RTN3-210ENST00000540798 BEGAINQ9BUH8 593 aa13.61□□□□□ -0.23
RTN3-210ENST00000540798 CEP44Q9C0F1 390 aa13.61□□□□□ -0.23
RTN3-210ENST00000540798 CLPBQ9H078 707 aa13.61□□□□□ -0.23
RTN3-210ENST00000540798 ASB8Q9H765 288 aa13.61□□□□□ -0.23
RTN3-210ENST00000540798 PCDH10Q9P2E7 1040 aa13.61□□□□□ -0.23
RTN3-210ENST00000540798 GPR45Q9Y5Y3 372 aa13.61□□□□□ -0.23
RTN3-210ENST00000540798 GLYATL1P3A0A0U1RQE8 302 aa13.61□□□□□ -0.23
RTN3-210ENST00000540798 NPIPB15A6NHN6 443 aaPredicted RBP13.61□□□□□ -0.23
RTN3-210ENST00000540798 A6NHS1 94 aa13.61□□□□□ -0.23
RTN3-210ENST00000540798 MRASO14807 208 aa13.61□□□□□ -0.23
RTN3-210ENST00000540798 SMNDC1O75940 238 aaKnown RBP eCLIP13.61□□□□□ -0.23
RTN3-210ENST00000540798 CYBBP04839 570 aa13.61□□□□□ -0.23
RTN3-210ENST00000540798 SPAM1P38567 509 aa13.61□□□□□ -0.23
RTN3-210ENST00000540798 STK19P49842 368 aaPredicted RBP13.61□□□□□ -0.23
RTN3-210ENST00000540798 ERVFC1P60507 584 aa13.61□□□□□ -0.23
RTN3-210ENST00000540798 MRPS35P82673 323 aaKnown RBP13.61□□□□□ -0.23
RTN3-210ENST00000540798 KLC1Q07866 573 aa13.61□□□□□ -0.23
RTN3-210ENST00000540798 SLC5A9Q2M3M2 681 aa13.61□□□□□ -0.23
RTN3-210ENST00000540798 COQ5Q5HYK3 327 aa13.61□□□□□ -0.23
RTN3-210ENST00000540798 C22orf39Q6P5X5 142 aa13.61□□□□□ -0.23
RTN3-210ENST00000540798 CRTC1Q6UUV9 634 aa13.61□□□□□ -0.23
RTN3-210ENST00000540798 MIER2Q8N344 545 aa13.61□□□□□ -0.23
RTN3-210ENST00000540798 SCRN2Q96FV2 425 aa13.61□□□□□ -0.23
RTN3-210ENST00000540798 CCT7Q99832 543 aa13.61□□□□□ -0.23
RTN3-210ENST00000540798 HGH1Q9BTY7 390 aa13.61□□□□□ -0.23
RTN3-210ENST00000540798 EMILIN2Q9BXX0 1053 aa13.61□□□□□ -0.23
RTN3-210ENST00000540798 CIPCQ9C0C6 399 aa13.61□□□□□ -0.23
RTN3-210ENST00000540798 VCX3BQ9H321 246 aa13.61□□□□□ -0.23
RTN3-210ENST00000540798 GIMAP2Q9UG22 337 aa13.61□□□□□ -0.23
RTN3-210ENST00000540798 PRSS51A0A1B0GVH4 220 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 NCF1BA6NI72 391 aaPredicted RBP13.6□□□□□ -0.23
RTN3-210ENST00000540798 NCF1CA8MVU1 366 aaPredicted RBP13.6□□□□□ -0.23
RTN3-210ENST00000540798 CCL16O15467 120 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 SNX2O60749 519 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 FGF19O95750 216 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 GLUD1P00367 558 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 LINC00032P0C843 101 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 NCF1P14598 390 aaPredicted RBP13.6□□□□□ -0.23
RTN3-210ENST00000540798 TRAP1Q12931 704 aaKnown RBP13.6□□□□□ -0.23
RTN3-210ENST00000540798 FBXO48Q5FWF7 155 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 GPRC6AQ5T6X5 926 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 ARMCX6Q7L4S7 300 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 RETREG3Q86VR2 466 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 DDIASQ8IXT1 998 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 PQLC1Q8N2U9 271 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 PCDH20Q8N6Y1 951 aaKnown RBP13.6□□□□□ -0.23
RTN3-210ENST00000540798 SNX31Q8N9S9 440 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 GATA6Q92908 595 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 HTATIP2Q9BUP3 242 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 KLHL4Q9C0H6 718 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 SPAG4Q9NPE6 437 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 HCFC1R1Q9NWW0 138 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 CD274Q9NZQ7 290 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 EIF2B4Q9UI10 523 aaKnown RBP13.6□□□□□ -0.23
RTN3-210ENST00000540798 BTRCQ9Y297 605 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 SOBPA7XYQ1 873 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 IDO1P14902 403 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 CA8P35219 290 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 ZFP36L2P47974 494 aaKnown RBP13.6□□□□□ -0.23
RTN3-210ENST00000540798 TRIM25Q14258 630 aaKnown RBP13.6□□□□□ -0.23
RTN3-210ENST00000540798 CHRNA6Q15825 494 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 MMEL1Q495T6 779 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 TPRG1Q6ZUI0 275 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 TSPAN33Q86UF1 283 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 BHLHE22Q8NFJ8 381 aaPredicted RBP13.6□□□□□ -0.23
RTN3-210ENST00000540798 TSPEARQ8WU66 669 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 DUS3LQ96G46 650 aaKnown RBP13.6□□□□□ -0.23
RTN3-210ENST00000540798 RPL10LQ96L21 214 aaKnown RBP13.6□□□□□ -0.23
RTN3-210ENST00000540798 TCF25Q9BQ70 676 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 BRINP2Q9C0B6 783 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 MAP10Q9P2G4 905 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 RIMS3Q9UJD0 308 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 MYOFQ9NZM1 2061 aa13.6□□□□□ -0.23
RTN3-210ENST00000540798 HIDE1A8MVS5 230 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 GRM6O15303 877 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 C8BP07358 591 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 HGFP14210 728 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 PEX2P28328 305 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 ECT2LQ008S8 904 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 CRY1Q16526 586 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 GEN1Q17RS7 908 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 LPCAT4Q643R3 524 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 PTRHD1Q6GMV3 140 aaKnown RBP13.59□□□□□ -0.23
RTN3-210ENST00000540798 CAPRIN2Q6IMN6 1127 aaKnown RBP13.59□□□□□ -0.23
RTN3-210ENST00000540798 GPRIN3Q6ZVF9 776 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 NXPE1Q8N323 547 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 CHCHD4Q8N4Q1 142 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 MRPL43Q8N983 215 aaKnown RBP13.59□□□□□ -0.23
RTN3-210ENST00000540798 DRAXINQ8NBI3 349 aaPredicted RBP13.59□□□□□ -0.23
RTN3-210ENST00000540798 TUBGCP3Q96CW5 907 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 KLHL32Q96NJ5 620 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 NR1H4Q96RI1 486 aaPredicted RBP13.59□□□□□ -0.23
RTN3-210ENST00000540798 C17orf80Q9BSJ5 609 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 SARS2Q9NP81 518 aaKnown RBP13.59□□□□□ -0.23
RTN3-210ENST00000540798 AIG1Q9NVV5 245 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 TMEM45AQ9NWC5 275 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 WBP1LQ9NX94 342 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 PTBP2Q9UKA9 531 aaKnown RBP13.59□□□□□ -0.23
RTN3-210ENST00000540798 CROTQ9UKG9 612 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms