RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 FRMD8P1Q9BZ68 369 aaPredicted RBP16.89■□□□□ 0.29
CACNA2D4-211ENST00000540728 SMG1Q96Q15 3661 aaKnown RBP16.89■□□□□ 0.29
CACNA2D4-211ENST00000540728 ATXN7O15265 892 aaPredicted RBP16.88■□□□□ 0.29
CACNA2D4-211ENST00000540728 PRAMEF1O95521 474 aa16.88■□□□□ 0.29
CACNA2D4-211ENST00000540728 CCDC175P0C221 793 aa16.88■□□□□ 0.29
CACNA2D4-211ENST00000540728 XRCC1P18887 633 aaPredicted RBP16.88■□□□□ 0.29
CACNA2D4-211ENST00000540728 MSH3P20585 1137 aa16.88■□□□□ 0.29
CACNA2D4-211ENST00000540728 STIP1P31948 543 aaKnown RBP16.88■□□□□ 0.29
CACNA2D4-211ENST00000540728 HADHAP40939 763 aa16.88■□□□□ 0.29
CACNA2D4-211ENST00000540728 MAPK9P45984 424 aa16.88■□□□□ 0.29
CACNA2D4-211ENST00000540728 OLIG2Q13516 323 aa16.88■□□□□ 0.29
CACNA2D4-211ENST00000540728 SPARCL1Q14515 664 aa16.88■□□□□ 0.29
CACNA2D4-211ENST00000540728 PTPRCAPQ14761 206 aa16.88■□□□□ 0.29
CACNA2D4-211ENST00000540728 RPS6KA1Q15418 735 aa16.88■□□□□ 0.29
CACNA2D4-211ENST00000540728 SEPT7Q16181 437 aaKnown RBP16.88■□□□□ 0.29
CACNA2D4-211ENST00000540728 LONRF2Q1L5Z9 754 aa16.88■□□□□ 0.29
CACNA2D4-211ENST00000540728 WDR74Q6RFH5 385 aaPredicted RBP16.88■□□□□ 0.29
CACNA2D4-211ENST00000540728 AMZ2Q86W34 360 aa16.88■□□□□ 0.29
CACNA2D4-211ENST00000540728 ZNF547Q8IVP9 402 aa16.88■□□□□ 0.29
CACNA2D4-211ENST00000540728 RCBTB1Q8NDN9 531 aa16.88■□□□□ 0.29
CACNA2D4-211ENST00000540728 SLC35B2Q8TB61 432 aa16.88■□□□□ 0.29
CACNA2D4-211ENST00000540728 NCSTNQ92542 709 aa16.88■□□□□ 0.29
CACNA2D4-211ENST00000540728 ZNF514Q96K75 400 aaPredicted RBP16.88■□□□□ 0.29
CACNA2D4-211ENST00000540728 TMEM121Q9BTD3 319 aa16.88■□□□□ 0.29
CACNA2D4-211ENST00000540728 ASB8Q9H765 288 aa16.88■□□□□ 0.29
CACNA2D4-211ENST00000540728 LRRC40Q9H9A6 602 aa16.88■□□□□ 0.29
CACNA2D4-211ENST00000540728 ARNT2Q9HBZ2 717 aa16.88■□□□□ 0.29
CACNA2D4-211ENST00000540728 SMOXQ9NWM0 555 aa16.88■□□□□ 0.29
CACNA2D4-211ENST00000540728 R3HDM2Q9Y2K5 976 aaKnown RBP16.88■□□□□ 0.29
CACNA2D4-211ENST00000540728 DNMT3AQ9Y6K1 912 aaPredicted RBP16.88■□□□□ 0.29
CACNA2D4-211ENST00000540728 TCRBV7S2A1N4TA0A589 114 aa16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 LILRA5A6NI73 299 aa16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 GAPDHSO14556 408 aaPredicted RBP16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 SRP72O76094 671 aaKnown RBP16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 PRB1P04280 392 aa16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 THRAP10827 490 aa16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 MPSTP25325 297 aa16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 RPL10P27635 214 aaKnown RBP16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 CSF2RBP32927 897 aa16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 HALP42357 657 aa16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 CLN3Q13286 438 aa16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 GSE1Q14687 1217 aa16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 TAF1BQ53T94 588 aaPredicted RBP16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 AGAP9Q5VTM2 703 aa16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 TMEM220Q6QAJ8 160 aa16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 ABRAXAS1Q6UWZ7 409 aa16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 WASH2PQ6VEQ5 465 aa16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 KLHDC8BQ8IXV7 354 aa16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 RASGEF1AQ8N9B8 481 aa16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 SLC39A7Q92504 469 aa16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 USP7Q93009 1102 aa16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 CXorf40BQ96DE9 158 aa16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 C19orf43Q9BQ61 176 aa16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 B3GNT4Q9C0J1 378 aa16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 UCK1Q9HA47 277 aa16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 WASH6PQ9NQA3 447 aa16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 FKBPLQ9UIM3 349 aa16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 CRLS1Q9UJA2 301 aa16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 ACSL6Q9UKU0 697 aa16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 KCTD3Q9Y597 815 aa16.87■□□□□ 0.29
CACNA2D4-211ENST00000540728 MGAQ8IWI9 3026 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 AHCTF1Q8WYP5 2266 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 PRAMEF33A0A0G2JMD5 474 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 OR2AG2A6NM03 316 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 GPR39O43194 453 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 PRAMEF10O60809 474 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 POP7O75817 140 aaKnown RBP16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 METTL18O95568 372 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 RALBP11234 206 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 ITGALP20701 1170 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 CD82P27701 267 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 ETV5P41161 510 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 SLC19A1P41440 591 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 UBE2IP63279 158 aaKnown RBP16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 CFHR1Q03591 330 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 VAC14Q08AM6 782 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 SNAP47Q5SQN1 464 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 KCTD11Q693B1 232 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 DENND5AQ6IQ26 1287 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 TMEM26Q6ZUK4 368 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 C11orf96Q7Z7L8 435 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 LINC00523Q86TU6 105 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 SLC13A5Q86YT5 568 aaPredicted RBP16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 LRRC8AQ8IWT6 810 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 RBM12BQ8IXT5 1001 aaKnown RBP16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 ULK4Q96C45 1275 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 DCUN1D1Q96GG9 259 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 TAAR9Q96RI9 348 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 TBC1D10AQ9BXI6 508 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 LZTFL1Q9NQ48 299 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 POT1Q9NUX5 634 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 TMEM9Q9P0T7 183 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 SCHIP1Q9P0W5 487 aaPredicted RBP16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 PDP2Q9P2J9 529 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 PCDHB11Q9Y5F2 797 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 SLC30A1Q9Y6M5 507 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 KALRNO60229 2985 aa16.86■□□□□ 0.29
CACNA2D4-211ENST00000540728 KLHL33A6NCF5 533 aa16.85■□□□□ 0.29
CACNA2D4-211ENST00000540728 PRR19A6NJB7 356 aa16.85■□□□□ 0.29
CACNA2D4-211ENST00000540728 CFAP99D6REC4 459 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms