RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 OTUD3Q5T2D3 398 aaPredicted RBP12.17□□□□□ -0.46
NPC1-202ENST00000540608 C17orf99Q6UX52 265 aa12.17□□□□□ -0.46
NPC1-202ENST00000540608 DLEU7Q6UYE1 221 aa12.17□□□□□ -0.46
NPC1-202ENST00000540608 DDHD1Q8NEL9 900 aa12.17□□□□□ -0.46
NPC1-202ENST00000540608 TANKQ92844 425 aa12.17□□□□□ -0.46
NPC1-202ENST00000540608 ACDQ96AP0 544 aa12.17□□□□□ -0.46
NPC1-202ENST00000540608 TRIB3Q96RU7 358 aa12.17□□□□□ -0.46
NPC1-202ENST00000540608 GPR21Q99679 349 aa12.17□□□□□ -0.46
NPC1-202ENST00000540608 V9GYQ6 96 aa12.17□□□□□ -0.46
NPC1-202ENST00000540608 NCF1BA6NI72 391 aaPredicted RBP12.16□□□□□ -0.46
NPC1-202ENST00000540608 NCF1CA8MVU1 366 aaPredicted RBP12.16□□□□□ -0.46
NPC1-202ENST00000540608 BTN3A1O00481 513 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 SYNCRIPO60506 623 aaKnown RBP12.16□□□□□ -0.46
NPC1-202ENST00000540608 SERPINF2P08697 491 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 NCF1P14598 390 aaPredicted RBP12.16□□□□□ -0.46
NPC1-202ENST00000540608 ELK4P28324 431 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 CTGFP29279 349 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 OR1E1P30953 314 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 ZNF140P52738 457 aaPredicted RBP12.16□□□□□ -0.46
NPC1-202ENST00000540608 BNIP3Q12983 259 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 DAG1Q14118 895 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 TRIP4Q15650 581 aaPredicted RBP12.16□□□□□ -0.46
NPC1-202ENST00000540608 DDR2Q16832 855 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 TMEM214Q6NUQ4 689 aaKnown RBP12.16□□□□□ -0.46
NPC1-202ENST00000540608 SLC2A7Q6PXP3 512 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 GPRIN3Q6ZVF9 776 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 RALGPS2Q86X27 583 aaPredicted RBP12.16□□□□□ -0.46
NPC1-202ENST00000540608 FNDC5Q8NAU1 212 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 C8orf48Q96LL4 319 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 ADAM2Q99965 735 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 SH3GLB1Q9Y371 365 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 B4GALT3O60512 393 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 DEAF1O75398 565 aaPredicted RBP12.16□□□□□ -0.46
NPC1-202ENST00000540608 TBX18O95935 607 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 ALPLP05186 524 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 TFPTP0C1Z6 253 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 EEF1B2P24534 225 aaKnown RBP12.16□□□□□ -0.46
NPC1-202ENST00000540608 GPR15P49685 360 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 DSC3Q14574 896 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 ZIK1Q3SY52 487 aaPredicted RBP12.16□□□□□ -0.46
NPC1-202ENST00000540608 ATP6AP1LQ52LC2 224 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 BROXQ5VW32 411 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 CST9Q5W186 159 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 ALG1LQ6GMV1 187 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 AFTPHQ6ULP2 937 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 Q6ZSR9 355 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 CIR1Q86X95 450 aaPredicted RBP12.16□□□□□ -0.46
NPC1-202ENST00000540608 RPRD1AQ96P16 312 aaPredicted RBP12.16□□□□□ -0.46
NPC1-202ENST00000540608 FANCEQ9HB96 536 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 PDFQ9HBH1 243 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 SLC30A1Q9Y6M5 507 aa12.16□□□□□ -0.46
NPC1-202ENST00000540608 ARNTLO00327 626 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 B4GAT1O43505 415 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 RAP2AP10114 183 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 MAP4P27816 1152 aaKnown RBP12.15□□□□□ -0.46
NPC1-202ENST00000540608 SHMT2P34897 504 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 MAPKAPK2P49137 400 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 TRAF2Q12933 501 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 PTPRNQ16849 979 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 RBM48Q5RL73 367 aaKnown RBP12.15□□□□□ -0.46
NPC1-202ENST00000540608 ITIH5Q86UX2 942 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 DTWD1Q8N5C7 304 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 TMBIM1Q969X1 311 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 NRBF2Q96F24 287 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 PALMDQ9NP74 551 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 HEBP1Q9NRV9 189 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 SPO11Q9Y5K1 396 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 IFRD1O00458 451 aaPredicted RBP12.15□□□□□ -0.46
NPC1-202ENST00000540608 E2F3O00716 465 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 OR4F21O95013 312 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 ZBTB11O95625 1053 aaPredicted RBP12.15□□□□□ -0.46
NPC1-202ENST00000540608 TSPAN12O95859 305 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 THRBP10828 461 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 ZNF182P17025 639 aaPredicted RBP12.15□□□□□ -0.46
NPC1-202ENST00000540608 PSMA3P25788 255 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 CD97P48960 835 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 BMXP51813 675 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 HK3P52790 923 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 FAM98BQ52LJ0 330 aaKnown RBP12.15□□□□□ -0.46
NPC1-202ENST00000540608 XAF1Q6GPH4 301 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 GPSM1Q86YR5 675 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 ZC3H7AQ8IWR0 971 aaKnown RBP12.15□□□□□ -0.46
NPC1-202ENST00000540608 OR4K2Q8NGD2 314 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 ITFG1Q8TB96 612 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 SNX19Q92543 992 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 ZNF382Q96SR6 550 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 ING2Q9H160 280 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 ZNF711Q9Y462 761 aa12.15□□□□□ -0.46
NPC1-202ENST00000540608 ABCB7O75027 752 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 VPS26AO75436 327 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 HPRP00739 348 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 ANXA6P08133 673 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 CD9P21926 228 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 HUNKP57058 714 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 TAF1AQ15573 450 aaPredicted RBP12.14□□□□□ -0.47
NPC1-202ENST00000540608 TGFBIQ15582 683 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 DCDC5Q6ZRR9 648 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 THAP5Q7Z6K1 395 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 MIB1Q86YT6 1006 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 CLEC4FQ8N1N0 589 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms