RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 A0A0J9YVX5 310 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 MTMR11A4FU01 709 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 DFNA5O60443 496 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 NDST3O95803 873 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 CYP4B1P13584 511 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 ABRAXAS2Q15018 415 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 C6orf136Q5SQH8 315 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 DDI1Q8WTU0 396 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 MYLIPQ8WY64 445 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 ISOC1Q96CN7 298 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 MYOCQ99972 504 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 CXorf21Q9HAI6 301 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 SDR39U1Q9NRG7 319 aaPredicted RBP13.96□□□□□ -0.17
INO80E-203ENST00000540562 WARS2Q9UGM6 360 aaKnown RBP13.96□□□□□ -0.17
INO80E-203ENST00000540562 INVSQ9Y283 1065 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 C2orf78A6NCI8 922 aa13.96□□□□□ -0.18
INO80E-203ENST00000540562 C2orf81A6NN90 581 aa13.96□□□□□ -0.18
INO80E-203ENST00000540562 GNGT2O14610 69 aa13.96□□□□□ -0.18
INO80E-203ENST00000540562 KERAO60938 352 aa13.96□□□□□ -0.18
INO80E-203ENST00000540562 VPS26AO75436 327 aa13.96□□□□□ -0.18
INO80E-203ENST00000540562 ALDH4A1P30038 563 aa13.96□□□□□ -0.18
INO80E-203ENST00000540562 POLR2IP36954 125 aaKnown RBP13.96□□□□□ -0.18
INO80E-203ENST00000540562 TRIP4Q15650 581 aaPredicted RBP13.96□□□□□ -0.18
INO80E-203ENST00000540562 NFE2Q16621 373 aaPredicted RBP13.96□□□□□ -0.18
INO80E-203ENST00000540562 CTSL3PQ5NE16 218 aa13.96□□□□□ -0.18
INO80E-203ENST00000540562 ENPP6Q6UWR7 440 aa13.96□□□□□ -0.18
INO80E-203ENST00000540562 C17orf99Q6UX52 265 aa13.96□□□□□ -0.18
INO80E-203ENST00000540562 KCTD8Q6ZWB6 473 aa13.96□□□□□ -0.18
INO80E-203ENST00000540562 DET1Q7L5Y6 550 aa13.96□□□□□ -0.18
INO80E-203ENST00000540562 LYSMD3Q7Z3D4 306 aa13.96□□□□□ -0.18
INO80E-203ENST00000540562 SNX29P2Q8IUI4 249 aa13.96□□□□□ -0.18
INO80E-203ENST00000540562 BIRC8Q96P09 236 aa13.96□□□□□ -0.18
INO80E-203ENST00000540562 PFDN4Q9NQP4 134 aa13.96□□□□□ -0.18
INO80E-203ENST00000540562 AGPAT4Q9NRZ5 378 aa13.96□□□□□ -0.18
INO80E-203ENST00000540562 KLQ9UEF7 1012 aa13.96□□□□□ -0.18
INO80E-203ENST00000540562 ANAPC2Q9UJX6 822 aa13.96□□□□□ -0.18
INO80E-203ENST00000540562 SLC45A1Q9Y2W3 748 aa13.96□□□□□ -0.18
INO80E-203ENST00000540562 ZNF623O75123 536 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 DIRAS1O95057 198 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 HNRNPCP07910 306 aaKnown RBP eCLIP13.95□□□□□ -0.18
INO80E-203ENST00000540562 CKBP12277 381 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 IDO1P14902 403 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 ZNF182P17025 639 aaPredicted RBP13.95□□□□□ -0.18
INO80E-203ENST00000540562 HLA-DPA1P20036 260 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 CORO1AP31146 461 aaKnown RBP13.95□□□□□ -0.18
INO80E-203ENST00000540562 IL2P60568 153 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 TXNL4AP83876 142 aaKnown RBP13.95□□□□□ -0.18
INO80E-203ENST00000540562 TRAF2Q12933 501 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 ATP1A4Q13733 1029 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 TGFBIQ15582 683 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 AP5B1Q2VPB7 878 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 MFSD14CQ5VZR4 134 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 KLHL35Q6PF15 583 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 COLGALT2Q8IYK4 626 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 SFRP1Q8N474 314 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 DHRSXQ8N5I4 330 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 PROKR1Q8TCW9 393 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 LKAAEAR1Q8TD35 194 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 AUTS2Q8WXX7 1259 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 KIAA1191Q96A73 305 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 PYCR2Q96C36 320 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 THAP11Q96EK4 314 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 TRMOQ9BU70 441 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 CIPCQ9C0C6 399 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 IKZF5Q9H5V7 419 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 MRPL40Q9NQ50 206 aaKnown RBP13.95□□□□□ -0.18
INO80E-203ENST00000540562 PRDM8Q9NQV8 689 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 NDUFA13Q9P0J0 144 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 LIMD1Q9UGP4 676 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 PCTPQ9UKL6 214 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 ANGPTL3Q9Y5C1 460 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 PRLP01236 227 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 PKMP14618 531 aaKnown RBP13.95□□□□□ -0.18
INO80E-203ENST00000540562 ATF6P18850 670 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 HOXC8P31273 242 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 OR1D2P34982 312 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 RPS9P46781 194 aaKnown RBP13.95□□□□□ -0.18
INO80E-203ENST00000540562 NEK2P51955 445 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 TNK2Q07912 1038 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 TRAP1Q12931 704 aaKnown RBP13.95□□□□□ -0.18
INO80E-203ENST00000540562 PLD1Q13393 1074 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 CPSF6Q16630 551 aaKnown RBP eCLIP13.95□□□□□ -0.18
INO80E-203ENST00000540562 PTRHD1Q6GMV3 140 aaKnown RBP13.95□□□□□ -0.18
INO80E-203ENST00000540562 OGFOD2Q6N063 350 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 PPP4R4Q6NUP7 873 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 GCNT7Q6ZNI0 430 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 Q6ZSR9 355 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 GALNT5Q7Z7M9 940 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 DTWD1Q8N5C7 304 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 OR4F6Q8NGB9 312 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 C1orf74Q96LT6 269 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 GPATCH1Q9BRR8 931 aaKnown RBP13.95□□□□□ -0.18
INO80E-203ENST00000540562 TNKS2Q9H2K2 1166 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 CARS2Q9HA77 564 aaKnown RBP13.95□□□□□ -0.18
INO80E-203ENST00000540562 CASP8AP2Q9UKL3 1982 aa13.95□□□□□ -0.18
INO80E-203ENST00000540562 A0A1W2PP18 115 aa13.94□□□□□ -0.18
INO80E-203ENST00000540562 NBNO60934 754 aa13.94□□□□□ -0.18
INO80E-203ENST00000540562 LDLRP01130 860 aa13.94□□□□□ -0.18
INO80E-203ENST00000540562 CYBAP13498 195 aa13.94□□□□□ -0.18
INO80E-203ENST00000540562 HRH2P25021 359 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms