RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 FAM71DQ8N9W8 422 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 PCSK9Q8NBP7 692 aaKnown RBP6.01□□□□□ -1.45
PTPRD-214ENST00000540109 ZNF540Q8NDQ6 660 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 SIMC1Q8NDZ2 872 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 TRNT1Q96Q11 434 aaKnown RBP6.01□□□□□ -1.45
PTPRD-214ENST00000540109 BBS4Q96RK4 519 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 TWNKQ96RR1 684 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 C12orf65Q9H3J6 166 aaKnown RBP6.01□□□□□ -1.45
PTPRD-214ENST00000540109 PAK6Q9NQU5 681 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-214ENST00000540109 TRPM5Q9NZQ8 1165 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 TSR3Q9UJK0 312 aaKnown RBP6.01□□□□□ -1.45
PTPRD-214ENST00000540109 RPS6KA6Q9UK32 745 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 MTF2Q9Y483 593 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-214ENST00000540109 CITO14578 2027 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 KRBA1A5PL33 1030 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 TMEM221A6NGB7 291 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 AKAP8O43823 692 aaKnown RBP6□□□□□ -1.45
PTPRD-214ENST00000540109 VAPBO95292 243 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 SNAP29O95721 258 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 THRBP10828 461 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 ODC1P11926 461 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 COL6A1P12109 1028 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 CST5P28325 142 aaPredicted RBP6□□□□□ -1.45
PTPRD-214ENST00000540109 MLLT3P42568 568 aaPredicted RBP6□□□□□ -1.45
PTPRD-214ENST00000540109 HUNKP57058 714 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 DSTNP60981 165 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 FOXM1Q08050 763 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 CACHD1Q5VU97 1274 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 RGMBQ6NW40 437 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 C17orf99Q6UX52 265 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 SNX20Q7Z614 316 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 PLCZ1Q86YW0 608 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 ELMO2Q96JJ3 720 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 DHRS4Q9BTZ2 278 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 THUMPD3Q9BV44 507 aaKnown RBP6□□□□□ -1.45
PTPRD-214ENST00000540109 SIAEQ9HAT2 523 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 ZNHIT2Q9UHR6 403 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 TESMINQ9Y4I5 508 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 PDCD11Q14690 1871 aaKnown RBP6□□□□□ -1.45
PTPRD-214ENST00000540109 SDR42E2A6NKP2 422 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 C2orf81A6NN90 581 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 PAPSS1O43252 624 aaPredicted RBP6□□□□□ -1.45
PTPRD-214ENST00000540109 ITGA2P17301 1181 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 NFKB1P19838 968 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 GLRBP48167 497 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 FAAP100Q0VG06 881 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 SCAPQ12770 1279 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 TSTA3Q13630 321 aaPredicted RBP6□□□□□ -1.45
PTPRD-214ENST00000540109 PLEKHG4Q58EX7 1191 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 UGT3A1Q6NUS8 523 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 RFPL4BQ6ZWI9 263 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 MRPL10Q7Z7H8 261 aaKnown RBP6□□□□□ -1.45
PTPRD-214ENST00000540109 NAT16Q8N8M0 369 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 TEX19Q8NA77 164 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 ATG16L2Q8NAA4 619 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 GALNT11Q8NCW6 608 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 TSPEARQ8WU66 669 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 ISOC1Q96CN7 298 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 PGAP3Q96FM1 320 aaPredicted RBP6□□□□□ -1.45
PTPRD-214ENST00000540109 CENPNQ96H22 339 aaPredicted RBP6□□□□□ -1.45
PTPRD-214ENST00000540109 CCDC115Q96NT0 180 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 PPP1R10Q96QC0 940 aaKnown RBP6□□□□□ -1.45
PTPRD-214ENST00000540109 C11orf84Q9BUA3 381 aaPredicted RBP6□□□□□ -1.45
PTPRD-214ENST00000540109 GSDMCQ9BYG8 508 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 ADAM7Q9H2U9 754 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 ABCB9Q9NP78 766 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 NGRNQ9NPE2 291 aaKnown RBP6□□□□□ -1.45
PTPRD-214ENST00000540109 HMGXB4Q9UGU5 601 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 FAM149AA5PLN7 773 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 HDAC3O15379 428 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 ZNF623O75123 536 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 LDOC1O95751 146 aaPredicted RBP6□□□□□ -1.45
PTPRD-214ENST00000540109 IGHA2P01877 340 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 SDC2P34741 201 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 IFNGR2P38484 337 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 CDH8P55286 799 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 TAGLNQ01995 201 aaKnown RBP6□□□□□ -1.45
PTPRD-214ENST00000540109 RPL6Q02878 288 aaKnown RBP6□□□□□ -1.45
PTPRD-214ENST00000540109 USP10Q14694 798 aaKnown RBP6□□□□□ -1.45
PTPRD-214ENST00000540109 FAM189A2Q15884 450 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 CLPPQ16740 277 aaPredicted RBP6□□□□□ -1.45
PTPRD-214ENST00000540109 N4BP2L1Q5TBK1 243 aaPredicted RBP6□□□□□ -1.45
PTPRD-214ENST00000540109 VWA5B1Q5TIE3 1220 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 TYW3Q6IPR3 259 aaKnown RBP6□□□□□ -1.45
PTPRD-214ENST00000540109 ITIH5Q86UX2 942 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 CIR1Q86X95 450 aaPredicted RBP6□□□□□ -1.45
PTPRD-214ENST00000540109 FAM20CQ8IXL6 584 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 CPT1BQ92523 772 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 OSMRQ99650 979 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 C1QTNF1Q9BXJ1 281 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 COQ10BQ9H8M1 238 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 FAM49BQ9NUQ9 324 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 CCDC167Q9P0B6 97 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6□□□□□ -1.45
PTPRD-214ENST00000540109 MTRRQ9UBK8 725 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 EIF3KQ9UBQ5 218 aaKnown RBP6□□□□□ -1.45
PTPRD-214ENST00000540109 TRPM7Q96QT4 1865 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 C11orf97A0A1B0GVM6 126 aaPredicted RBP6□□□□□ -1.45
PTPRD-214ENST00000540109 FAM240BA0A1B0GVZ2 78 aa6□□□□□ -1.45
PTPRD-214ENST00000540109 NPIPA7E9PJI5 369 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms