RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 RAB23Q9ULC3 237 aa18.67■□□□□ 0.58
TNFRSF1A-213ENST00000540022 SLC39A10Q9ULF5 831 aa18.67■□□□□ 0.58
TNFRSF1A-213ENST00000540022 CORO1CQ9ULV4 474 aaPredicted RBP18.67■□□□□ 0.58
TNFRSF1A-213ENST00000540022 CEP192Q8TEP8 1941 aa18.67■□□□□ 0.58
TNFRSF1A-213ENST00000540022 TMEM202A6NGA9 273 aa18.66■□□□□ 0.58
TNFRSF1A-213ENST00000540022 OR2AG2A6NM03 316 aa18.66■□□□□ 0.58
TNFRSF1A-213ENST00000540022 NIPSNAP2O75323 286 aa18.66■□□□□ 0.58
TNFRSF1A-213ENST00000540022 MYZAPP0CAP1 466 aa18.66■□□□□ 0.58
TNFRSF1A-213ENST00000540022 DHPSP49366 369 aaPredicted RBP18.66■□□□□ 0.58
TNFRSF1A-213ENST00000540022 CDKN2DP55273 166 aa18.66■□□□□ 0.58
TNFRSF1A-213ENST00000540022 KIAA1024LP59773 190 aa18.66■□□□□ 0.58
TNFRSF1A-213ENST00000540022 YPEL5P62699 121 aa18.66■□□□□ 0.58
TNFRSF1A-213ENST00000540022 TIAL1Q01085 375 aaKnown RBP eCLIP18.66■□□□□ 0.58
TNFRSF1A-213ENST00000540022 NFATC4Q14934 902 aa18.66■□□□□ 0.58
TNFRSF1A-213ENST00000540022 KCTD16Q68DU8 428 aa18.66■□□□□ 0.58
TNFRSF1A-213ENST00000540022 PTRHD1Q6GMV3 140 aaKnown RBP18.66■□□□□ 0.58
TNFRSF1A-213ENST00000540022 LAIR1Q6GTX8 287 aa18.66■□□□□ 0.58
TNFRSF1A-213ENST00000540022 SPNS2Q8IVW8 549 aa18.66■□□□□ 0.58
TNFRSF1A-213ENST00000540022 RGL4Q8IZJ4 473 aa18.66■□□□□ 0.58
TNFRSF1A-213ENST00000540022 LKAAEAR1Q8TD35 194 aa18.66■□□□□ 0.58
TNFRSF1A-213ENST00000540022 ZC3H10Q96K80 434 aaKnown RBP18.66■□□□□ 0.58
TNFRSF1A-213ENST00000540022 OLFM1Q99784 485 aa18.66■□□□□ 0.58
TNFRSF1A-213ENST00000540022 CCDC68Q9H2F9 335 aa18.66■□□□□ 0.58
TNFRSF1A-213ENST00000540022 CENPHQ9H3R5 247 aa18.66■□□□□ 0.58
TNFRSF1A-213ENST00000540022 TMBIM4Q9HC24 238 aa18.66■□□□□ 0.58
TNFRSF1A-213ENST00000540022 TM9SF3Q9HD45 589 aa18.66■□□□□ 0.58
TNFRSF1A-213ENST00000540022 GNPTGQ9UJJ9 305 aa18.66■□□□□ 0.58
TNFRSF1A-213ENST00000540022 VWA7Q9Y334 891 aa18.66■□□□□ 0.58
TNFRSF1A-213ENST00000540022 PCYT1BQ9Y5K3 369 aaPredicted RBP18.66■□□□□ 0.58
TNFRSF1A-213ENST00000540022 A0A1W2PR77 199 aa18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 TOR1BO14657 336 aa18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 RGS16O15492 202 aaPredicted RBP18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 AP2A2O94973 939 aa18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 FUCA1P04066 466 aa18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 WNT1P04628 370 aa18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 CEACAM5P06731 702 aa18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 SAT1P21673 171 aa18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 TGM1P22735 817 aa18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 ITPKAP23677 461 aa18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 RABIFP47224 123 aa18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 TAS2R39P59534 338 aa18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 RACK1P63244 317 aaKnown RBP18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 ILF2Q12905 390 aaKnown RBP18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 USP10Q14694 798 aaKnown RBP18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 WDR45BQ5MNZ6 344 aa18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 LYSMD4Q5XG99 296 aa18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 FAM45BPQ6NSW5 357 aa18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 TMEM220Q6QAJ8 160 aa18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 CMC1Q7Z7K0 106 aa18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 KRT222Q8N1A0 295 aa18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 SLC22A18ASQ8N1D0 253 aa18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 FAM45AQ8TCE6 357 aa18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 FAM136AQ96C01 138 aa18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 MTBPQ96DY7 904 aa18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 SH3GL2Q99962 352 aa18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 GPR27Q9NS67 375 aa18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 GALPQ9UBC7 116 aa18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 GMEB2Q9UKD1 530 aa18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 SLC17A4Q9Y2C5 497 aa18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 ATXN2Q99700 1313 aaKnown RBP18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 BPTFQ12830 3046 aa18.65■□□□□ 0.58
TNFRSF1A-213ENST00000540022 A0A1W2PPM1 405 aa18.64■□□□□ 0.58
TNFRSF1A-213ENST00000540022 CHUKO15111 745 aa18.64■□□□□ 0.58
TNFRSF1A-213ENST00000540022 NUAK1O60285 661 aa18.64■□□□□ 0.58
TNFRSF1A-213ENST00000540022 DNAJC6O75061 913 aa18.64■□□□□ 0.58
TNFRSF1A-213ENST00000540022 ALDOAP04075 364 aaKnown RBP18.64■□□□□ 0.58
TNFRSF1A-213ENST00000540022 OR56A5P0C7T3 313 aa18.64■□□□□ 0.58
TNFRSF1A-213ENST00000540022 THEGLP0DJG4 465 aa18.64■□□□□ 0.58
TNFRSF1A-213ENST00000540022 KRT15P19012 456 aa18.64■□□□□ 0.58
TNFRSF1A-213ENST00000540022 FDXRP22570 491 aa18.64■□□□□ 0.58
TNFRSF1A-213ENST00000540022 CD38P28907 300 aa18.64■□□□□ 0.58
TNFRSF1A-213ENST00000540022 THOP1P52888 689 aa18.64■□□□□ 0.58
TNFRSF1A-213ENST00000540022 POU4F1Q01851 419 aa18.64■□□□□ 0.58
TNFRSF1A-213ENST00000540022 GTF2H3Q13889 308 aa18.64■□□□□ 0.58
TNFRSF1A-213ENST00000540022 LAYNQ6UX15 382 aa18.64■□□□□ 0.58
TNFRSF1A-213ENST00000540022 CEP97Q8IW35 865 aa18.64■□□□□ 0.58
TNFRSF1A-213ENST00000540022 BEND7Q8N7W2 519 aaPredicted RBP18.64■□□□□ 0.58
TNFRSF1A-213ENST00000540022 FAM174AQ8TBP5 190 aa18.64■□□□□ 0.58
TNFRSF1A-213ENST00000540022 KCNJ9Q92806 393 aa18.64■□□□□ 0.58
TNFRSF1A-213ENST00000540022 PGM2Q96G03 612 aa18.64■□□□□ 0.58
TNFRSF1A-213ENST00000540022 ACBD3Q9H3P7 528 aa18.64■□□□□ 0.58
TNFRSF1A-213ENST00000540022 FGF22Q9HCT0 170 aa18.64■□□□□ 0.58
TNFRSF1A-213ENST00000540022 COMMD10Q9Y6G5 202 aa18.64■□□□□ 0.58
TNFRSF1A-213ENST00000540022 DOCK9Q9BZ29 2069 aa18.64■□□□□ 0.58
TNFRSF1A-213ENST00000540022 PLXNB3Q9ULL4 1909 aa18.64■□□□□ 0.57
TNFRSF1A-213ENST00000540022 LAMA1P25391 3075 aa18.64■□□□□ 0.57
TNFRSF1A-213ENST00000540022 GOLGA6L10A6NI86 522 aa18.64■□□□□ 0.57
TNFRSF1A-213ENST00000540022 H3BMM5 538 aa18.64■□□□□ 0.57
TNFRSF1A-213ENST00000540022 RHOBTB1O94844 696 aa18.64■□□□□ 0.57
TNFRSF1A-213ENST00000540022 TRIM16O95361 564 aa18.64■□□□□ 0.57
TNFRSF1A-213ENST00000540022 ITGB6P18564 788 aa18.64■□□□□ 0.57
TNFRSF1A-213ENST00000540022 CHRM3P20309 590 aa18.64■□□□□ 0.57
TNFRSF1A-213ENST00000540022 PI4KAP42356 2102 aa18.64■□□□□ 0.57
TNFRSF1A-213ENST00000540022 PRLHRP49683 370 aa18.64■□□□□ 0.57
TNFRSF1A-213ENST00000540022 DNAJC3Q13217 504 aa18.64■□□□□ 0.57
TNFRSF1A-213ENST00000540022 TNFAIP8L3Q5GJ75 292 aa18.64■□□□□ 0.57
TNFRSF1A-213ENST00000540022 ENPP7Q6UWV6 458 aa18.64■□□□□ 0.57
TNFRSF1A-213ENST00000540022 TIFABQ6ZNK6 161 aa18.64■□□□□ 0.57
TNFRSF1A-213ENST00000540022 PIM3Q86V86 326 aa18.64■□□□□ 0.57
TNFRSF1A-213ENST00000540022 ZNF547Q8IVP9 402 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms