RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 SLC26A3P40879 764 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 TMED10P49755 219 aaKnown RBP12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 TPD52P55327 224 aaPredicted RBP12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 FAM189BP81408 668 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 IL1RL1Q01638 556 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 PARP15Q460N3 678 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 CYBRD1Q53TN4 286 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 ABRAXAS1Q6UWZ7 409 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 STK32CQ86UX6 486 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 CROCCP3Q8IVE0 287 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 ADGRG5Q8IZF4 528 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 CLEC4FQ8N1N0 589 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 ANKFN1Q8N957 763 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 MDGA1Q8NFP4 955 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 GPR150Q8NGU9 434 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 GIPC2Q8TF65 315 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 SNX19Q92543 992 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 BORCS5Q969J3 196 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 SEPT5Q99719 369 aaPredicted RBP12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 LHPPQ9H008 270 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 NMRK2Q9NPI5 230 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 DAPK2Q9UIK4 370 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 FAM50BQ9Y247 325 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 NDUFAF1Q9Y375 327 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 KANSL1LA0AUZ9 987 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 ENPP3O14638 875 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 NOL3O60936 208 aaKnown RBP12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 RPP40O75818 363 aaKnown RBP12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 EOMESO95936 686 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 BCL10O95999 233 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 PRKAR2AP13861 404 aaKnown RBP12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 CDH3P22223 829 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 RCVRNP35243 200 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 MAGEA11P43364 429 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 ZNF829Q3KNS6 432 aaPredicted RBP12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 TIGD2Q4W5G0 525 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 PAQR3Q6TCH7 311 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 TAS1R1Q7RTX1 841 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 TMEM173Q86WV6 379 aaPredicted RBP12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 CLYBLQ8N0X4 340 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 OR4L1Q8NH43 312 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 BRSK1Q8TDC3 778 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 SDCCAG3Q96C92 435 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 CDKN2AIPNLQ96HQ2 116 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 FEM1CQ96JP0 617 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 MIR1-1HGQ9H1L0 117 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 U3KQV3 271 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 USP34Q70CQ2 3546 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 MTMR11A4FU01 709 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 NT5C1B-RDH14C9J2C7 533 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 CFAP99D6REC4 459 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 CCNA2P20248 432 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 TACR2P21452 398 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 MYF6P23409 242 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 RPS9P46781 194 aaKnown RBP12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 SGSHP51688 502 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 STC1P52823 247 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 TUBA4AP68366 448 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 GSTM4Q03013 218 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 INPP5AQ14642 412 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 LAPTM4AQ15012 233 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 MEP1AQ16819 746 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 TRIM16LQ309B1 348 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 IGFN1Q86VF2 1251 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 ARL10Q8N8L6 244 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 TWIST2Q8WVJ9 160 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 PPM1MQ96MI6 270 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 AARSD1Q9BTE6 412 aaKnown RBP12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 TRMOQ9BU70 441 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 SLC52A3Q9NQ40 469 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 AGPAT4Q9NRZ5 378 aa12.44□□□□□ -0.42
SFSWAP-208ENST00000539506 H3BNC9 293 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 CRCPO75575 148 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 PRLP01236 227 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 SLC10A3P09131 477 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 AGXTP21549 392 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 FMO4P31512 558 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 OPRL1P41146 370 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 GSK3BP49841 420 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 UFM1P61960 85 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 LIPEQ05469 1076 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 FOXD4Q12950 439 aaPredicted RBP12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 DUSP4Q13115 394 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 SPCS2Q15005 226 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 MAPRE2Q15555 327 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 LGI2Q8N0V4 545 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 PCYOX1LQ8NBM8 494 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 LRRC58Q96CX6 371 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 CDK15Q96Q40 435 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 CATSPERZQ9NTU4 200 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 ZNF225Q9UK10 706 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 TSC22D4Q9Y3Q8 395 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 ASB1Q9Y576 335 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 FXYD1O00168 92 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 TLR5O60602 858 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 CLASP2O75122 1294 aaKnown RBP12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 FGF1P05230 155 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 FGF4P08620 206 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 GFAPP14136 432 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 EEF1DP29692 281 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms