RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 GAREM2Q75VX8 874 aa17.7■□□□□ 0.42
GNE-204ENST00000539208 SLC15A3Q8IY34 581 aa17.7■□□□□ 0.42
GNE-204ENST00000539208 CBARPQ8N350 705 aaPredicted RBP17.7■□□□□ 0.42
GNE-204ENST00000539208 GOLM1Q8NBJ4 401 aa17.7■□□□□ 0.42
GNE-204ENST00000539208 EFHD1Q9BUP0 239 aa17.7■□□□□ 0.42
GNE-204ENST00000539208 CIPCQ9C0C6 399 aa17.7■□□□□ 0.42
GNE-204ENST00000539208 IL26Q9NPH9 171 aa17.7■□□□□ 0.42
GNE-204ENST00000539208 ASB1Q9Y576 335 aa17.7■□□□□ 0.42
GNE-204ENST00000539208 ZNF106Q9H2Y7 1883 aaKnown RBP17.7■□□□□ 0.42
GNE-204ENST00000539208 TXNDC9O14530 226 aa17.7■□□□□ 0.42
GNE-204ENST00000539208 ITGALP20701 1170 aa17.7■□□□□ 0.42
GNE-204ENST00000539208 PTPN5P54829 565 aa17.7■□□□□ 0.42
GNE-204ENST00000539208 BNIP2Q12982 314 aa17.7■□□□□ 0.42
GNE-204ENST00000539208 FAM151BQ6UXP7 276 aa17.7■□□□□ 0.42
GNE-204ENST00000539208 PDPRQ8NCN5 879 aa17.7■□□□□ 0.42
GNE-204ENST00000539208 LRRC58Q96CX6 371 aa17.7■□□□□ 0.42
GNE-204ENST00000539208 LRCH3Q96II8 777 aa17.7■□□□□ 0.42
GNE-204ENST00000539208 GBP5Q96PP8 586 aa17.7■□□□□ 0.42
GNE-204ENST00000539208 LRRC3Q9BY71 257 aa17.7■□□□□ 0.42
GNE-204ENST00000539208 TRIM54Q9BYV2 358 aa17.7■□□□□ 0.42
GNE-204ENST00000539208 YIPF3Q9GZM5 350 aa17.7■□□□□ 0.42
GNE-204ENST00000539208 ASB8Q9H765 288 aa17.7■□□□□ 0.42
GNE-204ENST00000539208 ATP13A3Q9H7F0 1226 aa17.7■□□□□ 0.42
GNE-204ENST00000539208 ARMC1Q9NVT9 282 aa17.7■□□□□ 0.42
GNE-204ENST00000539208 ZIM2Q9NZV7 527 aa17.7■□□□□ 0.42
GNE-204ENST00000539208 C1orf232A0A0U1RR37 186 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 ZNF821O75541 412 aaPredicted RBP17.69■□□□□ 0.42
GNE-204ENST00000539208 OR4F21O95013 312 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 IGSF6O95976 241 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 ZNF26P17031 533 aaPredicted RBP17.69■□□□□ 0.42
GNE-204ENST00000539208 SLC6A2P23975 617 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 HNF1BP35680 557 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 PPM1AP35813 382 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 ZFP36L2P47974 494 aaKnown RBP17.69■□□□□ 0.42
GNE-204ENST00000539208 RGS4P49798 205 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 ERVPABLB-1P60509 514 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 DEFB103AP81534 67 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 LMAN2Q12907 356 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 GPR33Q49SQ1 333 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 FOXB2Q5VYV0 432 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 FAM117BQ6P1L5 589 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 FRA10AC1Q70Z53 315 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 TMCO2Q7Z6W1 182 aaPredicted RBP17.69■□□□□ 0.42
GNE-204ENST00000539208 OR2T34Q8NGX1 318 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 OR2T11Q8NH01 316 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 OR2T3Q8NH03 318 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 BHMTQ93088 406 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 CFAP97Q9P2B7 532 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 SH3BP1Q9Y3L3 701 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 AQP12BA6NM10 295 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 RAD51BO15315 384 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 EEDO75530 441 aaKnown RBP17.69■□□□□ 0.42
GNE-204ENST00000539208 SLC22A3O75751 556 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 GLUD1P00367 558 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 CKMP06732 381 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 ACRV1P26436 265 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 KCNK10P57789 538 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 CYP4F8P98187 520 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 PLEKHG6Q3KR16 790 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 C6orf136Q5SQH8 315 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 TMC8Q8IU68 726 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 BBS7Q8IWZ6 715 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 AQP12AQ8IXF9 295 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 OR6K2Q8NGY2 324 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 ESAMQ96AP7 390 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 LYSMD1Q96S90 227 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 ACOX2Q99424 681 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 TRIM15Q9C019 465 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 TMEM39AQ9NV64 488 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 PCDHA9Q9Y5H5 950 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 AP4B1Q9Y6B7 739 aa17.69■□□□□ 0.42
GNE-204ENST00000539208 SCN8AQ9UQD0 1980 aa17.68■□□□□ 0.42
GNE-204ENST00000539208 CLDN7O95471 211 aa17.68■□□□□ 0.42
GNE-204ENST00000539208 S100BP04271 92 aaPredicted RBP17.68■□□□□ 0.42
GNE-204ENST00000539208 SPATA31D3P0C874 917 aa17.68■□□□□ 0.42
GNE-204ENST00000539208 DGKAP23743 735 aa17.68■□□□□ 0.42
GNE-204ENST00000539208 CRY1Q16526 586 aa17.68■□□□□ 0.42
GNE-204ENST00000539208 GRAMD4Q6IC98 578 aa17.68■□□□□ 0.42
GNE-204ENST00000539208 CYP2R1Q6VVX0 501 aa17.68■□□□□ 0.42
GNE-204ENST00000539208 MACC1Q6ZN28 852 aa17.68■□□□□ 0.42
GNE-204ENST00000539208 SPATA31D4Q6ZUB0 917 aa17.68■□□□□ 0.42
GNE-204ENST00000539208 CDYL2Q8N8U2 506 aa17.68■□□□□ 0.42
GNE-204ENST00000539208 OR52B6Q8NGF0 335 aa17.68■□□□□ 0.42
GNE-204ENST00000539208 NOL11Q9H8H0 719 aaKnown RBP17.68■□□□□ 0.42
GNE-204ENST00000539208 CMTM6Q9NX76 183 aa17.68■□□□□ 0.42
GNE-204ENST00000539208 PTBP2Q9UKA9 531 aaKnown RBP17.68■□□□□ 0.42
GNE-204ENST00000539208 OARD1Q9Y530 152 aa17.68■□□□□ 0.42
GNE-204ENST00000539208 DENND4CQ5VZ89 1909 aa17.68■□□□□ 0.42
GNE-204ENST00000539208 C15orf38-AP3S2A0A0A6YYH1 394 aa17.67■□□□□ 0.42
GNE-204ENST00000539208 GLYATL1P3A0A0U1RQE8 302 aa17.67■□□□□ 0.42
GNE-204ENST00000539208 DYTNA2CJ06 578 aa17.67■□□□□ 0.42
GNE-204ENST00000539208 GRXCR2A6NFK2 248 aa17.67■□□□□ 0.42
GNE-204ENST00000539208 FFAR2O15552 330 aa17.67■□□□□ 0.42
GNE-204ENST00000539208 NPPAP01160 153 aa17.67■□□□□ 0.42
GNE-204ENST00000539208 BPIP17213 487 aa17.67■□□□□ 0.42
GNE-204ENST00000539208 PFKLP17858 780 aa17.67■□□□□ 0.42
GNE-204ENST00000539208 SERPINA4P29622 427 aa17.67■□□□□ 0.42
GNE-204ENST00000539208 LETMD1Q6P1Q0 360 aa17.67■□□□□ 0.42
GNE-204ENST00000539208 Q6ZSR9 355 aa17.67■□□□□ 0.42
GNE-204ENST00000539208 GOLGA7Q7Z5G4 137 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms