RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 TRIM74Q86UV6 250 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 TRIM73Q86UV7 250 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 TMEM173Q86WV6 379 aaPredicted RBP14.41□□□□□ -0.1
CDCA3-207ENST00000538862 GPR152Q8TDT2 470 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 MYEOVQ96EZ4 313 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 CCDC97Q96F63 343 aaPredicted RBP14.41□□□□□ -0.1
CDCA3-207ENST00000538862 RMND5BQ96G75 393 aaPredicted RBP14.41□□□□□ -0.1
CDCA3-207ENST00000538862 ZNF558Q96NG5 402 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 FAM193BQ96PV7 902 aaPredicted RBP14.41□□□□□ -0.1
CDCA3-207ENST00000538862 NSUN3Q9H649 340 aaKnown RBP14.41□□□□□ -0.1
CDCA3-207ENST00000538862 IL1RL2Q9HB29 575 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 AGPAT4Q9NRZ5 378 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 TMEM45AQ9NWC5 275 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 GMPR2Q9P2T1 348 aaKnown RBP14.41□□□□□ -0.1
CDCA3-207ENST00000538862 GIMAP2Q9UG22 337 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 OAS3Q9Y6K5 1087 aaKnown RBP14.41□□□□□ -0.1
CDCA3-207ENST00000538862 C5orf42Q9H799 3197 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 DYTNA2CJ06 578 aa14.4□□□□□ -0.1
CDCA3-207ENST00000538862 C2orf81A6NN90 581 aa14.4□□□□□ -0.1
CDCA3-207ENST00000538862 SOCS2O14508 198 aa14.4□□□□□ -0.1
CDCA3-207ENST00000538862 NDUFS3O75489 264 aa14.4□□□□□ -0.1
CDCA3-207ENST00000538862 MLYCDO95822 493 aa14.4□□□□□ -0.1
CDCA3-207ENST00000538862 CYBBP04839 570 aa14.4□□□□□ -0.1
CDCA3-207ENST00000538862 GPIP06744 558 aa14.4□□□□□ -0.1
CDCA3-207ENST00000538862 PIRTP0C851 137 aa14.4□□□□□ -0.1
CDCA3-207ENST00000538862 C7P10643 843 aa14.4□□□□□ -0.1
CDCA3-207ENST00000538862 UROSP10746 265 aa14.4□□□□□ -0.1
CDCA3-207ENST00000538862 FCGR1AP12314 374 aa14.4□□□□□ -0.1
CDCA3-207ENST00000538862 CES1P23141 567 aa14.4□□□□□ -0.1
CDCA3-207ENST00000538862 FASP25445 335 aa14.4□□□□□ -0.1
CDCA3-207ENST00000538862 ERVFC1P60507 584 aa14.4□□□□□ -0.1
CDCA3-207ENST00000538862 GNA12Q03113 381 aa14.4□□□□□ -0.1
CDCA3-207ENST00000538862 SMARCB1Q12824 385 aa14.4□□□□□ -0.1
CDCA3-207ENST00000538862 ADGRD2Q7Z7M1 963 aa14.4□□□□□ -0.1
CDCA3-207ENST00000538862 PTRH1Q86Y79 214 aaKnown RBP14.4□□□□□ -0.1
CDCA3-207ENST00000538862 SPPL2CQ8IUH8 684 aa14.4□□□□□ -0.1
CDCA3-207ENST00000538862 LGI2Q8N0V4 545 aa14.4□□□□□ -0.1
CDCA3-207ENST00000538862 FUBP1Q96AE4 644 aaKnown RBP14.4□□□□□ -0.1
CDCA3-207ENST00000538862 MYRFLQ96LU7 910 aa14.4□□□□□ -0.1
CDCA3-207ENST00000538862 IGFLR1Q9H665 355 aa14.4□□□□□ -0.1
CDCA3-207ENST00000538862 CLK4Q9HAZ1 481 aaKnown RBP14.4□□□□□ -0.1
CDCA3-207ENST00000538862 SEMA4BQ9NPR2 832 aaPredicted RBP14.4□□□□□ -0.1
CDCA3-207ENST00000538862 TUBA8Q9NY65 449 aaPredicted RBP14.4□□□□□ -0.1
CDCA3-207ENST00000538862 FAM50BQ9Y247 325 aa14.4□□□□□ -0.1
CDCA3-207ENST00000538862 A0A0D9SEW6 157 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 KANSL1LA0AUZ9 987 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 H3BSA7 217 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 TMCC1O94876 653 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 ESRRBO95718 433 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 CHEK2O96017 543 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 SPATA31D3P0C874 917 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 CDH2P19022 906 aaPredicted RBP14.39□□□□□ -0.11
CDCA3-207ENST00000538862 KCNQ1P51787 676 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 KCNK10P57789 538 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 RCAN2Q14206 197 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 FAM171A1Q5VUB5 890 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 SPATA31D4Q6ZUB0 917 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 RBM23Q86U06 439 aaKnown RBP14.39□□□□□ -0.11
CDCA3-207ENST00000538862 BCL7CQ8WUZ0 217 aaPredicted RBP14.39□□□□□ -0.11
CDCA3-207ENST00000538862 HLA-CQ95604 372 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 CENPNQ96H22 339 aaPredicted RBP14.39□□□□□ -0.11
CDCA3-207ENST00000538862 C9orf16Q9BUW7 83 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 LMAN2LQ9H0V9 348 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 CAAP1Q9H8G2 361 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 AIG1Q9NVV5 245 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 ATXN10Q9UBB4 475 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 PTBP2Q9UKA9 531 aaKnown RBP14.39□□□□□ -0.11
CDCA3-207ENST00000538862 AURKCQ9UQB9 309 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 BTRCQ9Y297 605 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 SPO11Q9Y5K1 396 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 MUC3AQ02505 3323 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 A0A1B0GVG6 124 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 PFDN6O15212 129 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 INSIG1O15503 277 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 KDELR3O43731 214 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 TLR5O60602 858 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 EEDO75530 441 aaKnown RBP14.39□□□□□ -0.11
CDCA3-207ENST00000538862 BMP10O95393 424 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 PRSS56P0CW18 603 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 UMPSP11172 480 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 IMPDH2P12268 514 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 ALDH7A1P49419 539 aaKnown RBP14.39□□□□□ -0.11
CDCA3-207ENST00000538862 CDH4P55283 916 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 GPR17Q13304 367 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 TSNQ15631 228 aaKnown RBP14.39□□□□□ -0.11
CDCA3-207ENST00000538862 KCTD21Q4G0X4 260 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 XKR7Q5GH72 579 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 GLT6D1Q7Z4J2 308 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 ARHGAP22Q7Z5H3 698 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 SLC39A11Q8N1S5 342 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 TRPV3Q8NET8 790 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 OR4K2Q8NGD2 314 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 TMEM125Q96AQ2 219 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 RMDN1Q96DB5 314 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 CDK5RAP1Q96SZ6 601 aaKnown RBP14.39□□□□□ -0.11
CDCA3-207ENST00000538862 CINPQ9BW66 212 aaPredicted RBP14.39□□□□□ -0.11
CDCA3-207ENST00000538862 BRINP2Q9C0B6 783 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 TIMMDC1Q9NPL8 285 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 TLR9Q9NR96 1032 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 SPG21Q9NZD8 308 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms