RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 SIM2Q14190 667 aaPredicted RBP6.86□□□□□ -1.31
SORT1-209ENST00000538502 EIPR1Q53HC9 387 aa6.86□□□□□ -1.31
SORT1-209ENST00000538502 SH3D19Q5HYK7 790 aa6.86□□□□□ -1.31
SORT1-209ENST00000538502 CXorf57Q6NSI4 855 aaKnown RBP6.86□□□□□ -1.31
SORT1-209ENST00000538502 DCLRE1AQ6PJP8 1040 aa6.86□□□□□ -1.31
SORT1-209ENST00000538502 TRPM4Q8TD43 1214 aa6.86□□□□□ -1.31
SORT1-209ENST00000538502 DCSTAMPQ9H295 470 aa6.86□□□□□ -1.31
SORT1-209ENST00000538502 GLOD4Q9HC38 313 aa6.86□□□□□ -1.31
SORT1-209ENST00000538502 CNTN6Q9UQ52 1028 aa6.86□□□□□ -1.31
SORT1-209ENST00000538502 A0A1B0GVC2 190 aa6.86□□□□□ -1.31
SORT1-209ENST00000538502 RSL1D1O76021 490 aaKnown RBP6.86□□□□□ -1.31
SORT1-209ENST00000538502 PGLSO95336 258 aa6.86□□□□□ -1.31
SORT1-209ENST00000538502 GNRH1P01148 92 aa6.86□□□□□ -1.31
SORT1-209ENST00000538502 USP17L7P0C7H9 530 aa6.86□□□□□ -1.31
SORT1-209ENST00000538502 CCNCP24863 283 aa6.86□□□□□ -1.31
SORT1-209ENST00000538502 PARP15Q460N3 678 aa6.86□□□□□ -1.31
SORT1-209ENST00000538502 PYHIN1Q6K0P9 492 aa6.86□□□□□ -1.31
SORT1-209ENST00000538502 GPR65Q8IYL9 337 aa6.86□□□□□ -1.31
SORT1-209ENST00000538502 TOP6BLQ8N6T0 577 aa6.86□□□□□ -1.31
SORT1-209ENST00000538502 ASCC1Q8N9N2 400 aaKnown RBP6.86□□□□□ -1.31
SORT1-209ENST00000538502 DMRTB1Q96MA1 342 aa6.86□□□□□ -1.31
SORT1-209ENST00000538502 CAMK1GQ96NX5 476 aa6.86□□□□□ -1.31
SORT1-209ENST00000538502 TRNT1Q96Q11 434 aaKnown RBP6.86□□□□□ -1.31
SORT1-209ENST00000538502 BRD9Q9H8M2 597 aa6.86□□□□□ -1.31
SORT1-209ENST00000538502 THG1LQ9NWX6 298 aaKnown RBP6.86□□□□□ -1.31
SORT1-209ENST00000538502 DNMT3LQ9UJW3 386 aa6.86□□□□□ -1.31
SORT1-209ENST00000538502 ERVK-11Q9UQG0 969 aa6.86□□□□□ -1.31
SORT1-209ENST00000538502 NID2Q14112 1375 aa6.86□□□□□ -1.31
SORT1-209ENST00000538502 PRORSD1PA6NEY8 169 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 WRBO00258 174 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 PPEF2O14830 753 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 FFAR3O14843 346 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 GPR42O15529 346 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 LYPLA2O95372 231 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 CKMP06732 381 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 GSTT2P0CG29 244 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 GSTM3P21266 225 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 MANFP55145 182 aaKnown RBP6.85□□□□□ -1.31
SORT1-209ENST00000538502 CLCQ05315 142 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 NPTX1Q15818 432 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 ARL13AQ5H913 290 aaPredicted RBP6.85□□□□□ -1.31
SORT1-209ENST00000538502 SMYD5Q6GMV2 418 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 RTL4Q6ZR62 310 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 BRINP3Q76B58 766 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 RNF44Q7L0R7 432 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 ATCAYQ86WG3 371 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 CHERPQ8IWX8 916 aaKnown RBP6.85□□□□□ -1.31
SORT1-209ENST00000538502 TMEM161BQ8NDZ6 487 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 IRGQQ8WZA9 623 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 SEC14L1Q92503 715 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 NSMCE3Q96MG7 304 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 SLC30A2Q9BRI3 323 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 OSGEPL1Q9H4B0 414 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 ARPC4-TTLL3A0A0A6YYG9 625 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 I3L521 148 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 DLGAP1O14490 977 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 HPRP00739 348 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 ALDH2P05091 517 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 THPOP40225 353 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 CCNFP41002 786 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 PIK3CBP42338 1070 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 MRPS5P82675 430 aaKnown RBP6.85□□□□□ -1.31
SORT1-209ENST00000538502 SEMA3AQ14563 771 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 ZMYND11Q15326 602 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 EIF2S3LQ2VIR3 472 aaKnown RBP6.85□□□□□ -1.31
SORT1-209ENST00000538502 FAM76BQ5HYJ3 339 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 SHQ1Q6PI26 577 aaKnown RBP6.85□□□□□ -1.31
SORT1-209ENST00000538502 C6orf89Q6UWU4 347 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 COLGALT2Q8IYK4 626 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 P2RY11Q96G91 374 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 MAPKAP1Q9BPZ7 522 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 TTYH3Q9C0H2 523 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 CD93Q9NPY3 652 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 NKIRAS2Q9NYR9 191 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 ZIM2Q9NZV7 527 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 CNOT11Q9UKZ1 510 aaKnown RBP6.85□□□□□ -1.31
SORT1-209ENST00000538502 MAU2Q9Y6X3 613 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 SLIT3O75094 1523 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 NPEPPSL1A6NEC2 478 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 PER2O15055 1255 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 GOT1P17174 413 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 MMP8P22894 467 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 ARF5P84085 180 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 KCTD19Q17RG1 926 aaPredicted RBP6.85□□□□□ -1.31
SORT1-209ENST00000538502 ZNF404Q494X3 552 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 TEX44Q53QW1 395 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 COLEC12Q5KU26 742 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 CAPN13Q6MZZ7 669 aaPredicted RBP6.85□□□□□ -1.31
SORT1-209ENST00000538502 RANBP3LQ86VV4 465 aaPredicted RBP6.85□□□□□ -1.31
SORT1-209ENST00000538502 FNDC8Q8TC99 324 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 SNX33Q8WV41 574 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 TSEN15Q8WW01 171 aaKnown RBP6.85□□□□□ -1.31
SORT1-209ENST00000538502 TRUB1Q8WWH5 349 aaKnown RBP6.85□□□□□ -1.31
SORT1-209ENST00000538502 STON2Q8WXE9 905 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 AP2M1Q96CW1 435 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 RNF31Q96EP0 1072 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 VMP1Q96GC9 406 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 GLT1D1Q96MS3 346 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 KLHL5Q96PQ7 755 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 GFM1Q96RP9 751 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms