RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 MTRRQ9UBK8 725 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 CNOT6Q9ULM6 557 aaKnown RBP8.61□□□□□ -1.03
UBE3B-208ENST00000538070 MED16Q9Y2X0 877 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 ARHGAP10A1A4S6 786 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 LCHNA4D1U4 455 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 SLC22A3O75751 556 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 CAPN15O75808 1086 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 EPOP01588 193 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 IL10P22301 178 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 PBLDP30039 288 aaPredicted RBP8.6□□□□□ -1.03
UBE3B-208ENST00000538070 GRIA2P42262 883 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 NEK2P51955 445 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 SATB1Q01826 763 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 CBX2Q14781 532 aaPredicted RBP8.6□□□□□ -1.03
UBE3B-208ENST00000538070 PTGR1Q14914 329 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 LIN52Q52LA3 116 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 SETMARQ53H47 684 aaPredicted RBP8.6□□□□□ -1.03
UBE3B-208ENST00000538070 LETMD1Q6P1Q0 360 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 ZFP1Q6P2D0 407 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 RBM44Q6ZP01 1051 aaKnown RBP8.6□□□□□ -1.03
UBE3B-208ENST00000538070 ANKRD46Q86W74 232 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 PDZD8Q8NEN9 1154 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 OR2T11Q8NH01 316 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 EID2BQ96D98 161 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 ASB9Q96DX5 294 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 MAELQ96JY0 434 aaKnown RBP8.6□□□□□ -1.03
UBE3B-208ENST00000538070 PLEKHG4BQ96PX9 1271 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 GID8Q9NWU2 228 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 MAP10Q9P2G4 905 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 SLCO3A1Q9UIG8 710 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 CASP8AP2Q9UKL3 1982 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 FAM92AA1XBS5 289 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 NEDD8-MDP1E9PL57 170 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 ACOT8O14734 319 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 GSTA4O15217 222 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 TEX28O15482 410 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 SEC22BO75396 215 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 G6PDP11413 515 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 CSF2RAP15509 400 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 ZNF23P17027 643 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 ITGALP20701 1170 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 OXTRP30559 389 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 CSRP3P50461 194 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 ERVPABLB-1P60509 514 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 LIPEQ05469 1076 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 RBBP5Q15291 538 aaKnown RBP8.6□□□□□ -1.03
UBE3B-208ENST00000538070 GSTA3Q16772 222 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 AP5B1Q2VPB7 878 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 UGT3A2Q3SY77 523 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 RETSATQ6NUM9 610 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 SLC15A3Q8IY34 581 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 FIBCD1Q8N539 461 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 OR4F6Q8NGB9 312 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 FIG4Q92562 907 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 CCT7Q99832 543 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 ZNF385DQ9H6B1 395 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 IL37Q9NZH6 218 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 HECAQ9UBI9 543 aaPredicted RBP8.6□□□□□ -1.03
UBE3B-208ENST00000538070 RIMS3Q9UJD0 308 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 DHRS12A0PJE2 317 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 FKTNO75072 461 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 ZNF7P17097 686 aaPredicted RBP8.6□□□□□ -1.03
UBE3B-208ENST00000538070 HNF1BP35680 557 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 ATP6V0D1P61421 351 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 PLCL1Q15111 1095 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 PHKG1Q16816 387 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 OGFRL1Q5TC84 451 aaPredicted RBP8.6□□□□□ -1.03
UBE3B-208ENST00000538070 FBXO30Q8TB52 745 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 MAGEE2Q8TD90 523 aaPredicted RBP8.6□□□□□ -1.03
UBE3B-208ENST00000538070 PXYLP1Q8TE99 480 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 LRRC58Q96CX6 371 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 L3HYPDHQ96EM0 354 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 CDK5RAP1Q96SZ6 601 aaKnown RBP8.6□□□□□ -1.03
UBE3B-208ENST00000538070 C2orf49Q9BVC5 232 aaPredicted RBP8.6□□□□□ -1.03
UBE3B-208ENST00000538070 DERL2Q9GZP9 239 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 ATG10Q9H0Y0 220 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 ZDHHC4Q9NPG8 344 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 INTS10Q9NVR2 710 aaKnown RBP8.6□□□□□ -1.03
UBE3B-208ENST00000538070 CMTM6Q9NX76 183 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 FNIP2Q9P278 1114 aa8.6□□□□□ -1.03
UBE3B-208ENST00000538070 VWA8A3KMH1 1905 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 C7orf72A4D263 438 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 PLOD2O00469 737 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 KIF1CO43896 1103 aaKnown RBP8.59□□□□□ -1.03
UBE3B-208ENST00000538070 GMNNO75496 209 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 FAM58BPP0C7Q3 252 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 ZDHHC11BP0C7U3 371 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 ITPKAP23677 461 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 PSMA4P25789 261 aaKnown RBP8.59□□□□□ -1.03
UBE3B-208ENST00000538070 POLR2JP52435 117 aaKnown RBP8.59□□□□□ -1.03
UBE3B-208ENST00000538070 HERC3Q15034 1050 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 CNPY1Q3B7I2 92 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 SLC8B1Q6J4K2 584 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 RNF175Q8N4F7 328 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 FAM47BQ8NA70 645 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 HJURPQ8NCD3 748 aaPredicted RBP8.59□□□□□ -1.03
UBE3B-208ENST00000538070 ING5Q8WYH8 240 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 PLD4Q96BZ4 506 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 ZNF599Q96NL3 588 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 ACTR8Q9H981 624 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms