RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 CDCA7Q9BWT1 371 aaPredicted RBP5.62□□□□□ -1.51
CSMD1-215ENST00000537824 PPIL3Q9H2H8 161 aaKnown RBP5.62□□□□□ -1.51
CSMD1-215ENST00000537824 RAB23Q9ULC3 237 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 IFNGP01579 166 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 ACSL1P33121 698 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF181Q2M3W8 571 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 LILRB4Q8NHJ6 448 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 SELENOMQ8WWX9 145 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 MMP19Q99542 508 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 CORO1BQ9BR76 489 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 NLNQ9BYT8 704 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 TIGARQ9NQ88 270 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 PCDHB16Q9NRJ7 776 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 NUDT15Q9NV35 164 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 PAK1IP1Q9NWT1 392 aaPredicted RBP5.62□□□□□ -1.51
CSMD1-215ENST00000537824 GFOD1Q9NXC2 390 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 MEMO1Q9Y316 297 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 RSL1D1O76021 490 aaKnown RBP5.62□□□□□ -1.51
CSMD1-215ENST00000537824 RBM34P42696 430 aaKnown RBP5.62□□□□□ -1.51
CSMD1-215ENST00000537824 DAG1Q14118 895 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 MTFR2Q6P444 385 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 ZCCHC12Q6PEW1 402 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 SLC15A4Q8N697 577 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF486Q96H40 463 aaPredicted RBP5.62□□□□□ -1.51
CSMD1-215ENST00000537824 MAF1Q9H063 256 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 DHX33Q9H6R0 707 aaKnown RBP5.62□□□□□ -1.51
CSMD1-215ENST00000537824 RANBP3Q9H6Z4 567 aaPredicted RBP5.62□□□□□ -1.51
CSMD1-215ENST00000537824 SPACA6W5XKT8 324 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 ANK1P16157 1881 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 ATP6V1G2-DDX39BF2Z307 99 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 ULK1O75385 1050 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 OR6A2O95222 327 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 CKMT2P17540 419 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 IL4RP24394 825 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 GTF2E2P29084 291 aaKnown RBP5.62□□□□□ -1.51
CSMD1-215ENST00000537824 CD97P48960 835 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 RHEBQ15382 184 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF782Q6ZMW2 699 aaPredicted RBP5.62□□□□□ -1.51
CSMD1-215ENST00000537824 ZC3HC1Q86WB0 502 aaKnown RBP5.62□□□□□ -1.51
CSMD1-215ENST00000537824 GAL3ST1Q99999 423 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 SIGLEC16A6NMB1 481 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 VNN2O95498 520 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 RASA1P20936 1047 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 SKP1P63208 163 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 PITPNAQ00169 270 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 RNF151Q2KHN1 245 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 GPAT3Q53EU6 434 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 ANKRD46Q86W74 232 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 CMTR2Q8IYT2 770 aaKnown RBP5.62□□□□□ -1.51
CSMD1-215ENST00000537824 THAP6Q8TBB0 222 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 CCDC86Q9H6F5 360 aaKnown RBP5.62□□□□□ -1.51
CSMD1-215ENST00000537824 RIIAD1A6NNX1 92 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 M0R233 179 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 ANXA3P12429 323 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 MCCD1P59942 119 aaPredicted RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 RPP38P78345 283 aaKnown RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 FGL2Q14314 439 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 RAB39AQ14964 217 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF404Q494X3 552 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 LRRN1Q6UXK5 716 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF767PQ75MW2 155 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 CCDC3Q9BQI4 270 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 SSU72Q9NP77 194 aaKnown RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 ZNHIT2Q9UHR6 403 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 NUP98P52948 1817 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 NPEPPSL1A6NEC2 478 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 PRMT5O14744 637 aaPredicted RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 ALOX15BO15296 676 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 PRKAG1P54619 331 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 WDR4P57081 412 aaKnown RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 CCDC58Q4VC31 144 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 PPP1R26Q5T8A7 1209 aaPredicted RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 ATP6V0D2Q8N8Y2 350 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 STAG3L4Q8TBR4 150 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 TCTEX1D2Q8WW35 142 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 ASB15Q8WXK1 588 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 KCTD7Q96MP8 289 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 TMEM185BQ9H7F4 350 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 SNX6Q9UNH7 406 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 TNFRSF11BO00300 401 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 NUPL2O15504 423 aaKnown RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 MYCP01106 439 aaPredicted RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 RLN2P04090 185 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 ENDOUP21128 410 aaKnown RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 CPN2P22792 545 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 PTGIRP43119 386 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 ILF3Q12906 894 aaKnown RBP eCLIP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 MYLK3Q32MK0 819 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 SLC35C1Q96A29 364 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 DCPSQ96C86 337 aaKnown RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF607Q96SK3 696 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 HCN2Q9UL51 889 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 ELOVL7A1L3X0 281 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 CCNB2O95067 398 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 GIMD1P0DJR0 217 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 PIK3CBP42338 1070 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 LIMK2P53671 638 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 EIF5AP63241 154 aaKnown RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 GALEQ14376 348 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 SPATA19Q7Z5L4 167 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms