RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 FBXL8Q96CD0 374 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 TBATAQ96M53 351 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 TMEM74Q96NL1 305 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 CCDC115Q96NT0 180 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 UGT2B28Q9BY64 529 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 PRDM5Q9NQX1 630 aaPredicted RBP12.03□□□□□ -0.48
CPSF7-218ENST00000537641 INTS7Q9NVH2 962 aaKnown RBP12.03□□□□□ -0.48
CPSF7-218ENST00000537641 TMEM248Q9NWD8 314 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.03□□□□□ -0.48
CPSF7-218ENST00000537641 UXTQ9UBK9 157 aaPredicted RBP12.03□□□□□ -0.48
CPSF7-218ENST00000537641 ENPP5Q9UJA9 477 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 PLXNA3P51805 1871 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 CASTOR2A6NHX0 329 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 CLDN25C9JDP6 229 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 MSI1O43347 362 aaKnown RBP12.03□□□□□ -0.48
CPSF7-218ENST00000537641 TBC1D4O60343 1298 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 ECI2O75521 394 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 SOAT2O75908 522 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 GGT1P19440 569 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 ITIH1P19827 911 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 CTGFP29279 349 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 PLA2G16P53816 162 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 MLLT6P55198 1093 aaPredicted RBP12.03□□□□□ -0.48
CPSF7-218ENST00000537641 OXCT1P55809 520 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 MAXP61244 160 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 GNA12Q03113 381 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 CHRNB3Q05901 458 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 RAD51Q06609 339 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 PRKG2Q13237 762 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 BFSP2Q13515 415 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 TIGD2Q4W5G0 525 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 PYCR3Q53H96 274 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 MSANTD2Q6P1R3 559 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 CHST15Q7LFX5 561 aaPredicted RBP12.03□□□□□ -0.48
CPSF7-218ENST00000537641 R3HCC1LQ7Z5L2 792 aaKnown RBP12.03□□□□□ -0.48
CPSF7-218ENST00000537641 SYVN1Q86TM6 617 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 SAPCD2Q86UD0 394 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 GALNT13Q8IUC8 556 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 SPARTQ8N0X7 666 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 CLEC4FQ8N1N0 589 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 SVOPLQ8N434 492 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 NKAPQ8N5F7 415 aaKnown RBP12.03□□□□□ -0.48
CPSF7-218ENST00000537641 PDZD8Q8NEN9 1154 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 OR56A4Q8NGH8 313 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 ITFG1Q8TB96 612 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 S100ZQ8WXG8 99 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 HMCESQ96FZ2 354 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 BTN2A3PQ96KV6 586 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 TEX37Q96LM6 180 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 MROQ9BYG7 248 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 TRIM8Q9BZR9 551 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 AGO3Q9H9G7 860 aaKnown RBP12.03□□□□□ -0.48
CPSF7-218ENST00000537641 HMG20AQ9NP66 347 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 HEBP1Q9NRV9 189 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 ATAD3AQ9NVI7 634 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 TRNAU1APQ9NX07 287 aaKnown RBP12.03□□□□□ -0.48
CPSF7-218ENST00000537641 MPP6Q9NZW5 540 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 PCTPQ9UKL6 214 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 DOLKQ9UPQ8 538 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 NAALAD2Q9Y3Q0 740 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 C1orf232A0A0U1RR37 186 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 CCL22O00626 93 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 MGEA5O60502 916 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 ADAM23O75077 832 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 RSL1D1O76021 490 aaKnown RBP12.02□□□□□ -0.49
CPSF7-218ENST00000537641 RHOBTB1O94844 696 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 EPOP01588 193 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 ALOX5P09917 674 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 HALP42357 657 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 IL10RBQ08334 325 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 SLC10A7Q0GE19 358 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 SREBF2Q12772 1141 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 SEMA3AQ14563 771 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 OXA1LQ15070 435 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 TRIM16LQ309B1 348 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 ZIK1Q3SY52 487 aaPredicted RBP12.02□□□□□ -0.49
CPSF7-218ENST00000537641 C6orf141Q5SZD1 244 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 OTUD3Q5T2D3 398 aaPredicted RBP12.02□□□□□ -0.49
CPSF7-218ENST00000537641 ITIH5Q86UX2 942 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 ANKRD13BQ86YJ7 626 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 ZNF683Q8IZ20 524 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 CHDHQ8NE62 594 aaPredicted RBP12.02□□□□□ -0.49
CPSF7-218ENST00000537641 ABHD11Q8NFV4 315 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 OR8J3Q8NGG0 315 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 OR4L1Q8NH43 312 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 TRIB2Q92519 343 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 FKBP10Q96AY3 582 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 ABHD8Q96I13 439 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 ZNF641Q96N77 438 aaPredicted RBP12.02□□□□□ -0.49
CPSF7-218ENST00000537641 PAAF1Q9BRP4 392 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 ZYG11BQ9C0D3 744 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 SEMA4BQ9NPR2 832 aaPredicted RBP12.02□□□□□ -0.49
CPSF7-218ENST00000537641 TAS2R13Q9NYV9 303 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 PADI3Q9ULW8 664 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 PDE10AQ9Y233 779 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 SNX5Q9Y5X3 404 aa12.02□□□□□ -0.49
CPSF7-218ENST00000537641 FRMPD3Q5JV73 1810 aa12.01□□□□□ -0.49
CPSF7-218ENST00000537641 A0A0U1RQF3 1178 aa12.01□□□□□ -0.49
CPSF7-218ENST00000537641 J3KR12 359 aa12.01□□□□□ -0.49
CPSF7-218ENST00000537641 M0QZQ0 153 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms