RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 SUDS3Q9H7L9 328 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-204ENST00000537068 PCDH9Q9HC56 1237 aa5.17□□□□□ -1.58
SNHG1-204ENST00000537068 TRIM39Q9HCM9 518 aa5.17□□□□□ -1.58
SNHG1-204ENST00000537068 SLC40A1Q9NP59 571 aa5.17□□□□□ -1.58
SNHG1-204ENST00000537068 NT5MQ9NPB1 228 aa5.17□□□□□ -1.58
SNHG1-204ENST00000537068 ATP13A2Q9NQ11 1180 aa5.17□□□□□ -1.58
SNHG1-204ENST00000537068 WASH6PQ9NQA3 447 aa5.17□□□□□ -1.58
SNHG1-204ENST00000537068 ANO10Q9NW15 660 aa5.17□□□□□ -1.58
SNHG1-204ENST00000537068 ZNF624Q9P2J8 865 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-204ENST00000537068 ATXN10Q9UBB4 475 aa5.17□□□□□ -1.58
SNHG1-204ENST00000537068 NFKBIL1Q9UBC1 381 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-204ENST00000537068 CPNE7Q9UBL6 633 aa5.17□□□□□ -1.58
SNHG1-204ENST00000537068 CHKBQ9Y259 395 aa5.17□□□□□ -1.58
SNHG1-204ENST00000537068 PRKAB1Q9Y478 270 aa5.17□□□□□ -1.58
SNHG1-204ENST00000537068 MRPS18BQ9Y676 258 aaKnown RBP5.17□□□□□ -1.58
SNHG1-204ENST00000537068 SLC30A1Q9Y6M5 507 aa5.17□□□□□ -1.58
SNHG1-204ENST00000537068 RPS6KL1Q9Y6S9 549 aa5.17□□□□□ -1.58
SNHG1-204ENST00000537068 CCDC88CQ9P219 2028 aa5.17□□□□□ -1.58
SNHG1-204ENST00000537068 SPENQ96T58 3664 aaKnown RBP5.16□□□□□ -1.58
SNHG1-204ENST00000537068 NUP210LQ5VU65 1888 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 GOLGA6CA6NDK9 693 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 GOLGA6BA6NDN3 693 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 INPP4BO15327 924 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 MFSD11O43934 449 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 CREG1O75629 220 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 UBXN7O94888 489 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 ASMTLO95671 621 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 CYP1A2P05177 515 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 RPLP1P05386 114 aaKnown RBP5.16□□□□□ -1.58
SNHG1-204ENST00000537068 HLA-DQB2P05538 268 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 CD48P09326 243 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 GOLGA6DP0CG33 693 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 SKILP12757 684 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 BRAFP15056 766 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 EPB42P16452 691 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 ZNF8P17098 575 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-204ENST00000537068 NELFEP18615 380 aaKnown RBP5.16□□□□□ -1.58
SNHG1-204ENST00000537068 ZNF165P49910 485 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 GFERP55789 205 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 DCDC1P59894 354 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 KLHL30Q0D2K2 578 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 NFATC2Q13469 925 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 SEMA5AQ13591 1074 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 SEPT6Q14141 434 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 DPYSL3Q14195 570 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 NR1I3Q14994 352 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 SLC14A2Q15849 920 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 DEFB109BQ30KR1 87 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.16□□□□□ -1.582e-12■■□□□ 11.6
SNHG1-204ENST00000537068 ATP13A4Q4VNC1 1196 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 ANKRD20A8PQ5CZ79 823 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 SNAP47Q5SQN1 464 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 ATP1A1-AS1Q5TC04 95 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 PAPD7Q5XG87 772 aaKnown RBP5.16□□□□□ -1.58
SNHG1-204ENST00000537068 PDPK2PQ6A1A2 396 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 SASS6Q6UVJ0 657 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 C6orf15Q6UXA7 325 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-204ENST00000537068 PRSS42Q7Z5A4 293 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 ADGRG6Q86SQ4 1221 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 ZNF547Q8IVP9 402 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 RBM12BQ8IXT5 1001 aaKnown RBP5.16□□□□□ -1.58
SNHG1-204ENST00000537068 PAF1Q8N7H5 531 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 CNTD1Q8N815 330 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 DTX3LQ8TDB6 740 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 EPS8L3Q8TE67 593 aaKnown RBP5.16□□□□□ -1.58
SNHG1-204ENST00000537068 HSPH1Q92598 858 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 SYN2Q92777 582 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-204ENST00000537068 HDAC11Q96DB2 347 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 SLC41A2Q96JW4 573 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 NAP1L5Q96NT1 182 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-204ENST00000537068 BPIFA3Q9BQP9 254 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 ZNF670Q9BS34 389 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 MLPHQ9BV36 600 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-204ENST00000537068 XPO4Q9C0E2 1151 aaKnown RBP5.16□□□□□ -1.58
SNHG1-204ENST00000537068 STN1Q9H668 368 aaKnown RBP5.16□□□□□ -1.58
SNHG1-204ENST00000537068 MAGEE1Q9HCI5 957 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 LHX9Q9NQ69 397 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 PRDM8Q9NQV8 689 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 KLC4Q9NSK0 619 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.16□□□□□ -1.58
SNHG1-204ENST00000537068 RBM22Q9NW64 420 aaKnown RBP eCLIP5.16□□□□□ -1.581e-8■■■□□ 18.1
SNHG1-204ENST00000537068 GOLGA6AQ9NYA3 693 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 DTLQ9NZJ0 730 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 PKD2L2Q9NZM6 624 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 MYO1AQ9UBC5 1043 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 SLC23A2Q9UGH3 650 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 IP6K2Q9UHH9 426 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 KCND3Q9UK17 655 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 TLK1Q9UKI8 766 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 TMPRSS11EQ9UL52 423 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 NENFQ9UMX5 172 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 KCNK6Q9Y257 313 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 PLAAQ9Y263 795 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 TP53TG5Q9Y2B4 290 aa5.16□□□□□ -1.58
SNHG1-204ENST00000537068 PCSK5Q92824 1860 aa5.15□□□□□ -1.58
SNHG1-204ENST00000537068 A0A087X0T9 212 aa5.15□□□□□ -1.59
SNHG1-204ENST00000537068 C1orf232A0A0U1RR37 186 aa5.15□□□□□ -1.59
SNHG1-204ENST00000537068 A0A1W2PQJ5 194 aa5.15□□□□□ -1.59
SNHG1-204ENST00000537068 ZNF487B1APH4 448 aa5.15□□□□□ -1.59
SNHG1-204ENST00000537068 C21orf140B9A014 251 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms