RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 TCTEX1D4Q5JR98 221 aa4.44□□□□□ -1.7
CCDC7-208ENST00000537047 NDUFAF5Q5TEU4 345 aa4.44□□□□□ -1.7
CCDC7-208ENST00000537047 BSPRYQ5W0U4 402 aa4.44□□□□□ -1.7
CCDC7-208ENST00000537047 ZNF613Q6PF04 617 aa4.44□□□□□ -1.7
CCDC7-208ENST00000537047 SDCCAG8Q86SQ7 713 aaPredicted RBP4.44□□□□□ -1.7
CCDC7-208ENST00000537047 SLC5A8Q8N695 610 aa4.44□□□□□ -1.7
CCDC7-208ENST00000537047 AMER3Q8N944 861 aa4.44□□□□□ -1.7
CCDC7-208ENST00000537047 SEMA4DQ92854 862 aa4.44□□□□□ -1.7
CCDC7-208ENST00000537047 RNF125Q96EQ8 232 aa4.44□□□□□ -1.7
CCDC7-208ENST00000537047 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.44□□□□□ -1.7
CCDC7-208ENST00000537047 ZHX2Q9Y6X8 837 aa4.44□□□□□ -1.7
CCDC7-208ENST00000537047 NOTCH2Q04721 2471 aa4.44□□□□□ -1.7
CCDC7-208ENST00000537047 A0A1W2PNU3 283 aaPredicted RBP4.43□□□□□ -1.7
CCDC7-208ENST00000537047 PLPP2O43688 288 aa4.43□□□□□ -1.7
CCDC7-208ENST00000537047 SRSF10O75494 262 aaKnown RBP4.43□□□□□ -1.7
CCDC7-208ENST00000537047 BMP10O95393 424 aa4.43□□□□□ -1.7
CCDC7-208ENST00000537047 EML2O95834 649 aa4.43□□□□□ -1.7
CCDC7-208ENST00000537047 HMBSP08397 361 aa4.43□□□□□ -1.7
CCDC7-208ENST00000537047 TYMPP19971 482 aa4.43□□□□□ -1.7
CCDC7-208ENST00000537047 SLC6A12P48065 614 aa4.43□□□□□ -1.7
CCDC7-208ENST00000537047 F2RL1P55085 397 aa4.43□□□□□ -1.7
CCDC7-208ENST00000537047 OS9Q13438 667 aaPredicted RBP4.43□□□□□ -1.7
CCDC7-208ENST00000537047 TAF12Q16514 161 aa4.43□□□□□ -1.7
CCDC7-208ENST00000537047 ZNF805Q5CZA5 627 aa4.43□□□□□ -1.7
CCDC7-208ENST00000537047 NAA35Q5VZE5 725 aa4.43□□□□□ -1.7
CCDC7-208ENST00000537047 METTL7BQ6UX53 244 aa4.43□□□□□ -1.7
CCDC7-208ENST00000537047 KRTAP5-2Q701N4 177 aa4.43□□□□□ -1.7
CCDC7-208ENST00000537047 PTOV1Q86YD1 416 aa4.43□□□□□ -1.7
CCDC7-208ENST00000537047 PAF1Q8N7H5 531 aa4.43□□□□□ -1.7
CCDC7-208ENST00000537047 ZNF614Q8N883 585 aa4.43□□□□□ -1.7
CCDC7-208ENST00000537047 TRIM63Q969Q1 353 aa4.43□□□□□ -1.7
CCDC7-208ENST00000537047 TMEM68Q96MH6 324 aa4.43□□□□□ -1.7
CCDC7-208ENST00000537047 ZNF300Q96RE9 604 aaPredicted RBP4.43□□□□□ -1.7
CCDC7-208ENST00000537047 PRKRIP1Q9H875 184 aaPredicted RBP4.43□□□□□ -1.7
CCDC7-208ENST00000537047 BUD23O43709 281 aaKnown RBP4.42□□□□□ -1.7
CCDC7-208ENST00000537047 GCNT3O95395 438 aa4.42□□□□□ -1.7
CCDC7-208ENST00000537047 F9P00740 461 aa4.42□□□□□ -1.7
CCDC7-208ENST00000537047 FRMD6-AS1P0C7T7 363 aa4.42□□□□□ -1.7
CCDC7-208ENST00000537047 ABCD3P28288 659 aa4.42□□□□□ -1.7
CCDC7-208ENST00000537047 PAFAH1B1P43034 410 aa4.42□□□□□ -1.7
CCDC7-208ENST00000537047 SNRPD1P62314 119 aaKnown RBP4.42□□□□□ -1.7
CCDC7-208ENST00000537047 BAK1Q16611 211 aa4.42□□□□□ -1.7
CCDC7-208ENST00000537047 PNLIPRP3Q17RR3 467 aa4.42□□□□□ -1.7
CCDC7-208ENST00000537047 ASPRV1Q53RT3 343 aa4.42□□□□□ -1.7
CCDC7-208ENST00000537047 ARHGEF16Q5VV41 709 aa4.42□□□□□ -1.7
CCDC7-208ENST00000537047 Q6ZSR9 355 aa4.42□□□□□ -1.7
CCDC7-208ENST00000537047 ANKRD18AQ8IVF6 992 aa4.42□□□□□ -1.7
CCDC7-208ENST00000537047 CNTROBQ8N137 903 aa4.42□□□□□ -1.7
CCDC7-208ENST00000537047 EMC1Q8N766 993 aa4.42□□□□□ -1.7
CCDC7-208ENST00000537047 OR2T12Q8NG77 320 aa4.42□□□□□ -1.7
CCDC7-208ENST00000537047 MMABQ96EY8 250 aaPredicted RBP4.42□□□□□ -1.7
CCDC7-208ENST00000537047 UBXN10Q96LJ8 280 aa4.42□□□□□ -1.7
CCDC7-208ENST00000537047 RPS6KC1Q96S38 1066 aa4.42□□□□□ -1.7
CCDC7-208ENST00000537047 PKP2Q99959 881 aa4.42□□□□□ -1.7
CCDC7-208ENST00000537047 RTP3Q9BQQ7 232 aa4.42□□□□□ -1.7
CCDC7-208ENST00000537047 PCNX3Q9H6A9 2034 aa4.42□□□□□ -1.7
CCDC7-208ENST00000537047 SCPEP1Q9HB40 452 aa4.42□□□□□ -1.7
CCDC7-208ENST00000537047 MBNL1Q9NR56 388 aaKnown RBP4.42□□□□□ -1.7
CCDC7-208ENST00000537047 NAALADL1Q9UQQ1 740 aa4.42□□□□□ -1.7
CCDC7-208ENST00000537047 PI15O43692 258 aa4.41□□□□□ -1.7
CCDC7-208ENST00000537047 JRKO75564 520 aa4.41□□□□□ -1.7
CCDC7-208ENST00000537047 DUS4LO95620 317 aaKnown RBP4.41□□□□□ -1.7
CCDC7-208ENST00000537047 ICAM3P32942 547 aa4.41□□□□□ -1.7
CCDC7-208ENST00000537047 THOP1P52888 689 aa4.41□□□□□ -1.7
CCDC7-208ENST00000537047 KRTAP10-8P60410 259 aa4.41□□□□□ -1.7
CCDC7-208ENST00000537047 TLE2Q04725 743 aa4.41□□□□□ -1.7
CCDC7-208ENST00000537047 ISCA2Q86U28 154 aa4.41□□□□□ -1.7
CCDC7-208ENST00000537047 SLC38A9Q8NBW4 561 aa4.41□□□□□ -1.7
CCDC7-208ENST00000537047 MRGPRDQ8TDS7 321 aa4.41□□□□□ -1.7
CCDC7-208ENST00000537047 TMEM143Q96AN5 459 aa4.41□□□□□ -1.7
CCDC7-208ENST00000537047 SLC47A1Q96FL8 570 aa4.41□□□□□ -1.7
CCDC7-208ENST00000537047 EGLN2Q96KS0 407 aa4.41□□□□□ -1.7
CCDC7-208ENST00000537047 NR1H4Q96RI1 486 aaPredicted RBP4.41□□□□□ -1.7
CCDC7-208ENST00000537047 SIL1Q9H173 461 aa4.41□□□□□ -1.7
CCDC7-208ENST00000537047 MAU2Q9Y6X3 613 aa4.41□□□□□ -1.7
CCDC7-208ENST00000537047 ZNF197O14709 1029 aa4.4□□□□□ -1.71
CCDC7-208ENST00000537047 TGFB1I1O43294 461 aa4.4□□□□□ -1.71
CCDC7-208ENST00000537047 CBLP22681 906 aa4.4□□□□□ -1.71
CCDC7-208ENST00000537047 CEACAM8P31997 349 aaPredicted RBP4.4□□□□□ -1.71
CCDC7-208ENST00000537047 KCNJ10P78508 379 aa4.4□□□□□ -1.71
CCDC7-208ENST00000537047 TRPC3Q13507 836 aa4.4□□□□□ -1.71
CCDC7-208ENST00000537047 FRG1Q14331 258 aaKnown RBP4.4□□□□□ -1.71
CCDC7-208ENST00000537047 LRIF1Q5T3J3 769 aa4.4□□□□□ -1.71
CCDC7-208ENST00000537047 DOK6Q6PKX4 331 aa4.4□□□□□ -1.71
CCDC7-208ENST00000537047 C1orf52Q8N6N3 182 aaKnown RBP4.4□□□□□ -1.71
CCDC7-208ENST00000537047 LAT2Q9GZY6 243 aa4.4□□□□□ -1.71
CCDC7-208ENST00000537047 SEMA6AQ9H2E6 1030 aa4.4□□□□□ -1.71
CCDC7-208ENST00000537047 PPCSQ9HAB8 311 aa4.4□□□□□ -1.71
CCDC7-208ENST00000537047 YIPF1Q9Y548 306 aa4.4□□□□□ -1.71
CCDC7-208ENST00000537047 ADAMTS9Q9P2N4 1935 aa4.39□□□□□ -1.71
CCDC7-208ENST00000537047 EIF3CLB5ME19 914 aaKnown RBP4.39□□□□□ -1.71
CCDC7-208ENST00000537047 H3BQ06 376 aaPredicted RBP4.39□□□□□ -1.71
CCDC7-208ENST00000537047 RAF1P04049 648 aa4.39□□□□□ -1.71
CCDC7-208ENST00000537047 FAM157CP0CG43 387 aa4.39□□□□□ -1.71
CCDC7-208ENST00000537047 ACADSP16219 412 aa4.39□□□□□ -1.71
CCDC7-208ENST00000537047 HRH2P25021 359 aa4.39□□□□□ -1.71
CCDC7-208ENST00000537047 HARS2P49590 506 aaKnown RBP4.39□□□□□ -1.71
CCDC7-208ENST00000537047 SNX16P57768 344 aa4.39□□□□□ -1.71
CCDC7-208ENST00000537047 CEBPZQ03701 1054 aaKnown RBP4.39□□□□□ -1.71
CCDC7-208ENST00000537047 ALS2CLQ60I27 953 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms