RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 CRTC2Q53ET0 693 aaPredicted RBP19.34■□□□□ 0.69
TNFRSF1B-204ENST00000536782 TRAPPC5Q8IUR0 188 aa19.34■□□□□ 0.69
TNFRSF1B-204ENST00000536782 BRSK1Q8TDC3 778 aa19.34■□□□□ 0.69
TNFRSF1B-204ENST00000536782 TTC25Q96NG3 672 aa19.34■□□□□ 0.69
TNFRSF1B-204ENST00000536782 TRABDQ9H4I3 376 aa19.34■□□□□ 0.69
TNFRSF1B-204ENST00000536782 SAE1Q9UBE0 346 aaPredicted RBP19.34■□□□□ 0.69
TNFRSF1B-204ENST00000536782 FAM153AQ9UHL3 310 aa19.34■□□□□ 0.69
TNFRSF1B-204ENST00000536782 HYOU1Q9Y4L1 999 aa19.34■□□□□ 0.69
TNFRSF1B-204ENST00000536782 RPS6KL1Q9Y6S9 549 aa19.34■□□□□ 0.69
TNFRSF1B-204ENST00000536782 ZNF106Q9H2Y7 1883 aaKnown RBP19.34■□□□□ 0.69
TNFRSF1B-204ENST00000536782 OR52A4PA6NMU1 304 aa19.33■□□□□ 0.68
TNFRSF1B-204ENST00000536782 SPOPO43791 374 aa19.33■□□□□ 0.68
TNFRSF1B-204ENST00000536782 COMTP21964 271 aa19.33■□□□□ 0.68
TNFRSF1B-204ENST00000536782 CDKN2BP42772 138 aa19.33■□□□□ 0.68
TNFRSF1B-204ENST00000536782 TNNT3P45378 269 aaPredicted RBP19.33■□□□□ 0.68
TNFRSF1B-204ENST00000536782 CAPZBP47756 277 aa19.33■□□□□ 0.68
TNFRSF1B-204ENST00000536782 SH3BP2P78314 561 aa19.33■□□□□ 0.68
TNFRSF1B-204ENST00000536782 GPR18Q14330 331 aa19.33■□□□□ 0.68
TNFRSF1B-204ENST00000536782 IL11RAQ14626 422 aa19.33■□□□□ 0.68
TNFRSF1B-204ENST00000536782 DEFB109BQ30KR1 87 aa19.33■□□□□ 0.68
TNFRSF1B-204ENST00000536782 ZDHHC20Q5W0Z9 365 aa19.33■□□□□ 0.68
TNFRSF1B-204ENST00000536782 C16orf46Q6P387 395 aa19.33■□□□□ 0.68
TNFRSF1B-204ENST00000536782 C6orf15Q6UXA7 325 aaPredicted RBP19.33■□□□□ 0.68
TNFRSF1B-204ENST00000536782 PRSS42Q7Z5A4 293 aa19.33■□□□□ 0.68
TNFRSF1B-204ENST00000536782 C11orf96Q7Z7L8 435 aa19.33■□□□□ 0.68
TNFRSF1B-204ENST00000536782 C9orf43Q8TAL5 461 aaPredicted RBP19.33■□□□□ 0.68
TNFRSF1B-204ENST00000536782 APOBEC4Q8WW27 367 aaKnown RBP19.33■□□□□ 0.68
TNFRSF1B-204ENST00000536782 RSC1A1Q92681 617 aa19.33■□□□□ 0.68
TNFRSF1B-204ENST00000536782 ZDHHC12Q96GR4 267 aa19.33■□□□□ 0.68
TNFRSF1B-204ENST00000536782 OR6C1Q96RD1 312 aa19.33■□□□□ 0.68
TNFRSF1B-204ENST00000536782 TRIM10Q9UDY6 481 aa19.33■□□□□ 0.68
TNFRSF1B-204ENST00000536782 LOC285095A0A1B0GVY8 99 aa19.32■□□□□ 0.68
TNFRSF1B-204ENST00000536782 MTSS1O43312 755 aa19.32■□□□□ 0.68
TNFRSF1B-204ENST00000536782 CST8O60676 142 aa19.32■□□□□ 0.68
TNFRSF1B-204ENST00000536782 KCNJ13O60928 360 aa19.32■□□□□ 0.68
TNFRSF1B-204ENST00000536782 MFAP3LO75121 409 aa19.32■□□□□ 0.68
TNFRSF1B-204ENST00000536782 ZNF28P17035 718 aa19.32■□□□□ 0.68
TNFRSF1B-204ENST00000536782 NFKB1P19838 968 aa19.32■□□□□ 0.68
TNFRSF1B-204ENST00000536782 CD68P34810 354 aaPredicted RBP19.32■□□□□ 0.68
TNFRSF1B-204ENST00000536782 HALP42357 657 aa19.32■□□□□ 0.68
TNFRSF1B-204ENST00000536782 WNT3AP56704 352 aa19.32■□□□□ 0.68
TNFRSF1B-204ENST00000536782 WASHC5Q12768 1159 aa19.32■□□□□ 0.68
TNFRSF1B-204ENST00000536782 TCEAL1Q15170 157 aa19.32■□□□□ 0.68
TNFRSF1B-204ENST00000536782 SKIDA1Q1XH10 827 aa19.32■□□□□ 0.68
TNFRSF1B-204ENST00000536782 CACHD1Q5VU97 1274 aa19.32■□□□□ 0.68
TNFRSF1B-204ENST00000536782 RASGRP3Q8IV61 690 aa19.32■□□□□ 0.68
TNFRSF1B-204ENST00000536782 VSTM4Q8IW00 320 aa19.32■□□□□ 0.68
TNFRSF1B-204ENST00000536782 DTX3LQ8TDB6 740 aa19.32■□□□□ 0.68
TNFRSF1B-204ENST00000536782 IL26Q9NPH9 171 aa19.32■□□□□ 0.68
TNFRSF1B-204ENST00000536782 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.32■□□□□ 0.68
TNFRSF1B-204ENST00000536782 INTUQ9ULD6 942 aa19.32■□□□□ 0.68
TNFRSF1B-204ENST00000536782 WDR37Q9Y2I8 494 aa19.32■□□□□ 0.68
TNFRSF1B-204ENST00000536782 PCDHB3Q9Y5E6 796 aa19.32■□□□□ 0.68
TNFRSF1B-204ENST00000536782 KIF1CO43896 1103 aaKnown RBP19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 NDUFA10O95299 355 aa19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 EPOP01588 193 aa19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 PECAM1P16284 738 aaPredicted RBP19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 DLSTP36957 453 aa19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 SPAM1P38567 509 aa19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 SEPT6Q14141 434 aa19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 NOMO1Q15155 1222 aa19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 TAZQ16635 292 aa19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 SIRPB2Q5JXA9 342 aa19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 ATP1A1-AS1Q5TC04 95 aa19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 KAZNQ674X7 775 aa19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 IRGCQ6NXR0 463 aa19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 KDELC1Q6UW63 502 aa19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 AMZ2Q86W34 360 aa19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 TTC30BQ8N4P2 665 aa19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 SLC25A41Q8N5S1 370 aa19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 GALNT6Q8NCL4 622 aa19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 KLHL6Q8WZ60 621 aa19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 P3H4Q92791 437 aa19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 RNF31Q96EP0 1072 aa19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 STAMBPL1Q96FJ0 436 aa19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 ZCCHC2Q9C0B9 1178 aaKnown RBP19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 RAB33BQ9H082 229 aa19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 ZNF71Q9NQZ8 489 aaPredicted RBP19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 HACD3Q9P035 362 aa19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 KLHL8Q9P2G9 620 aaPredicted RBP19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 EPHA6Q9UF33 1036 aa19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 ANAPC2Q9UJX6 822 aa19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 MRPS18BQ9Y676 258 aaKnown RBP19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 USP9XQ93008 2570 aaPredicted RBP19.31■□□□□ 0.68
TNFRSF1B-204ENST00000536782 PSTPIP1O43586 416 aa19.3■□□□□ 0.68
TNFRSF1B-204ENST00000536782 KIAA0754O94854 1291 aa19.3■□□□□ 0.68
TNFRSF1B-204ENST00000536782 FGF5P12034 268 aa19.3■□□□□ 0.68
TNFRSF1B-204ENST00000536782 F8A1P23610 371 aa19.3■□□□□ 0.68
TNFRSF1B-204ENST00000536782 LLGL1Q15334 1064 aa19.3■□□□□ 0.68
TNFRSF1B-204ENST00000536782 PPP2R5EQ16537 467 aa19.3■□□□□ 0.68
TNFRSF1B-204ENST00000536782 LDLRAP1Q5SW96 308 aa19.3■□□□□ 0.68
TNFRSF1B-204ENST00000536782 CYB5D1Q6P9G0 228 aa19.3■□□□□ 0.68
TNFRSF1B-204ENST00000536782 SPOCD1Q6ZMY3 1216 aa19.3■□□□□ 0.68
TNFRSF1B-204ENST00000536782 FAM92BQ6ZTR7 304 aa19.3■□□□□ 0.68
TNFRSF1B-204ENST00000536782 PID1Q7Z2X4 250 aa19.3■□□□□ 0.68
TNFRSF1B-204ENST00000536782 GLT6D1Q7Z4J2 308 aa19.3■□□□□ 0.68
TNFRSF1B-204ENST00000536782 ZC3H18Q86VM9 953 aaKnown RBP19.3■□□□□ 0.68
TNFRSF1B-204ENST00000536782 ABHD17AQ96GS6 310 aa19.3■□□□□ 0.68
TNFRSF1B-204ENST00000536782 ELMO2Q96JJ3 720 aa19.3■□□□□ 0.68
TNFRSF1B-204ENST00000536782 MRGPRX2Q96LB1 330 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms