RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 PKD2L2Q9NZM6 624 aa22.41■■□□□ 1.18
HMGA2-206ENST00000536545 NKX1-2Q9UD57 310 aaPredicted RBP22.41■■□□□ 1.18
HMGA2-206ENST00000536545 L3MBTL1Q9Y468 752 aa22.41■■□□□ 1.18
HMGA2-206ENST00000536545 PLXNA2O75051 1894 aa22.41■■□□□ 1.18
HMGA2-206ENST00000536545 A0A1B0GTL3 188 aa22.4■■□□□ 1.18
HMGA2-206ENST00000536545 TRIM16O95361 564 aa22.4■■□□□ 1.18
HMGA2-206ENST00000536545 NFATC1O95644 943 aa22.4■■□□□ 1.18
HMGA2-206ENST00000536545 TIMP2P16035 220 aa22.4■■□□□ 1.18
HMGA2-206ENST00000536545 FSHRP23945 695 aa22.4■■□□□ 1.18
HMGA2-206ENST00000536545 MAGEA10P43363 369 aaPredicted RBP22.4■■□□□ 1.18
HMGA2-206ENST00000536545 DCDC1P59894 354 aa22.4■■□□□ 1.18
HMGA2-206ENST00000536545 MESP2Q0VG99 397 aa22.4■■□□□ 1.18
HMGA2-206ENST00000536545 LARP4Q71RC2 724 aaKnown RBP eCLIP22.4■■□□□ 1.18
HMGA2-206ENST00000536545 TWIST2Q8WVJ9 160 aa22.4■■□□□ 1.18
HMGA2-206ENST00000536545 FGF13Q92913 245 aa22.4■■□□□ 1.18
HMGA2-206ENST00000536545 LRIG1Q96JA1 1093 aa22.4■■□□□ 1.18
HMGA2-206ENST00000536545 COPS8Q99627 209 aa22.4■■□□□ 1.18
HMGA2-206ENST00000536545 PCDH12Q9NPG4 1184 aa22.4■■□□□ 1.18
HMGA2-206ENST00000536545 SEMA4BQ9NPR2 832 aaPredicted RBP22.4■■□□□ 1.18
HMGA2-206ENST00000536545 LATS2Q9NRM7 1088 aa22.4■■□□□ 1.18
HMGA2-206ENST00000536545 SPATS2LQ9NUQ6 558 aaKnown RBP22.4■■□□□ 1.18
HMGA2-206ENST00000536545 MRGBPQ9NV56 204 aa22.4■■□□□ 1.18
HMGA2-206ENST00000536545 DKK3Q9UBP4 350 aa22.4■■□□□ 1.18
HMGA2-206ENST00000536545 EIF2B4Q9UI10 523 aaKnown RBP22.4■■□□□ 1.18
HMGA2-206ENST00000536545 TMPRSS11EQ9UL52 423 aa22.4■■□□□ 1.18
HMGA2-206ENST00000536545 ASB1Q9Y576 335 aa22.4■■□□□ 1.18
HMGA2-206ENST00000536545 LAMA3Q16787 3333 aa22.4■■□□□ 1.18
HMGA2-206ENST00000536545 EZRP15311 586 aaKnown RBP22.4■■□□□ 1.18
HMGA2-206ENST00000536545 DGKAP23743 735 aa22.4■■□□□ 1.18
HMGA2-206ENST00000536545 CYLC2Q14093 348 aaPredicted RBP22.4■■□□□ 1.18
HMGA2-206ENST00000536545 ARHGEF7Q14155 803 aa22.4■■□□□ 1.18
HMGA2-206ENST00000536545 SQLEQ14534 574 aa22.4■■□□□ 1.18
HMGA2-206ENST00000536545 KHDC1Q4VXA5 237 aaKnown RBP22.4■■□□□ 1.18
HMGA2-206ENST00000536545 MYO1HQ8N1T3 1032 aa22.4■■□□□ 1.18
HMGA2-206ENST00000536545 NXPE3Q969Y0 559 aa22.4■■□□□ 1.18
HMGA2-206ENST00000536545 ZFYVE19Q96K21 471 aa22.4■■□□□ 1.18
HMGA2-206ENST00000536545 C3orf30Q96M34 536 aa22.4■■□□□ 1.18
HMGA2-206ENST00000536545 KCNA7Q96RP8 456 aa22.4■■□□□ 1.18
HMGA2-206ENST00000536545 DZANK1Q9NVP4 752 aa22.4■■□□□ 1.18
HMGA2-206ENST00000536545 NFKBIL1Q9UBC1 381 aaPredicted RBP22.4■■□□□ 1.18
HMGA2-206ENST00000536545 TSR3Q9UJK0 312 aaKnown RBP22.4■■□□□ 1.18
HMGA2-206ENST00000536545 E2F3O00716 465 aa22.39■■□□□ 1.17
HMGA2-206ENST00000536545 UBDO15205 165 aa22.39■■□□□ 1.17
HMGA2-206ENST00000536545 CIB2O75838 187 aa22.39■■□□□ 1.17
HMGA2-206ENST00000536545 LMNAP02545 664 aaKnown RBP22.39■■□□□ 1.17
HMGA2-206ENST00000536545 TRMT5Q32P41 509 aaKnown RBP22.39■■□□□ 1.17
HMGA2-206ENST00000536545 ZNF805Q5CZA5 627 aa22.39■■□□□ 1.17
HMGA2-206ENST00000536545 RARS2Q5T160 578 aaKnown RBP22.39■■□□□ 1.17
HMGA2-206ENST00000536545 FRA10AC1Q70Z53 315 aa22.39■■□□□ 1.17
HMGA2-206ENST00000536545 HSD11B1LQ7Z5J1 315 aa22.39■■□□□ 1.17
HMGA2-206ENST00000536545 PDPRQ8NCN5 879 aa22.39■■□□□ 1.17
HMGA2-206ENST00000536545 HMGCLL1Q8TB92 370 aa22.39■■□□□ 1.17
HMGA2-206ENST00000536545 EBF3Q9H4W6 596 aa22.39■■□□□ 1.17
HMGA2-206ENST00000536545 KLHL42Q9P2K6 505 aa22.39■■□□□ 1.17
HMGA2-206ENST00000536545 PIP5K1BO14986 540 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 CCNT2O60583 730 aaKnown RBP22.38■■□□□ 1.17
HMGA2-206ENST00000536545 MLYCDO95822 493 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 FCARP24071 287 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 RALGDSQ12967 914 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 PTK2BQ14289 1009 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 CRY1Q16526 586 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 PGM2L1Q6PCE3 622 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 DPPA4Q7L190 304 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 SYVN1Q86TM6 617 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 DEFB107AQ8IZN7 70 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 HCAR2Q8TDS4 363 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 PBX4Q9BYU1 374 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 TUBB1Q9H4B7 451 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 TRPV4Q9HBA0 871 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 ELOVL2Q9NXB9 296 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 UTP6Q9NYH9 597 aaKnown RBP22.38■■□□□ 1.17
HMGA2-206ENST00000536545 CD84Q9UIB8 345 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 OARD1Q9Y530 152 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 KIAA1549LQ6ZVL6 1849 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 PIKFYVEQ9Y2I7 2098 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 OTOL1A6NHN0 477 aaPredicted RBP22.38■■□□□ 1.17
HMGA2-206ENST00000536545 EPOPA6NHQ4 379 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 HEPACAM2A8MVW5 462 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 PRRT4C9JH25 899 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 ATP4BP51164 291 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 PCBP2Q15366 365 aaKnown RBP eCLIP22.38■■□□□ 1.173e-8■■■■■ 27.2
HMGA2-206ENST00000536545 GET4Q7L5D6 327 aaPredicted RBP22.38■■□□□ 1.17
HMGA2-206ENST00000536545 ZNF366Q8N895 744 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 OR56A4Q8NGH8 313 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 DTX3LQ8TDB6 740 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 PANX3Q96QZ0 392 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 ZNF382Q96SR6 550 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 CDCA3Q99618 268 aaPredicted RBP22.38■■□□□ 1.17
HMGA2-206ENST00000536545 FAM83CQ9BQN1 747 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 NUSAP1Q9BXS6 441 aaKnown RBP22.38■■□□□ 1.17
HMGA2-206ENST00000536545 NKX2-4Q9H2Z4 354 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 KCTD5Q9NXV2 234 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 OBP2AQ9NY56 170 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 ZNF225Q9UK10 706 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 PTGDR2Q9Y5Y4 395 aa22.38■■□□□ 1.17
HMGA2-206ENST00000536545 RAD51BO15315 384 aa22.37■■□□□ 1.17
HMGA2-206ENST00000536545 ESRRBO95718 433 aa22.37■■□□□ 1.17
HMGA2-206ENST00000536545 SLC6A11P48066 632 aa22.37■■□□□ 1.17
HMGA2-206ENST00000536545 NUDT2P50583 147 aa22.37■■□□□ 1.17
HMGA2-206ENST00000536545 ST8SIA6P61647 398 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms