RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 ZNF510Q9Y2H8 683 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 AP4B1Q9Y6B7 739 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 TRAV19A0A0A6YYK7 116 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 EME2A4GXA9 379 aaPredicted RBP13.22□□□□□ -0.29
VPS33B-202ENST00000535906 SNX2O60749 519 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 RNASEH2AO75792 299 aaKnown RBP13.22□□□□□ -0.29
VPS33B-202ENST00000535906 ESRRBO95718 433 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 UGT1A6P19224 532 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 UGT1A1P22309 533 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 UGT1A4P22310 534 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 UGT1A3P35503 534 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 UGT1A5P35504 534 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 CCR2P41597 374 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 HSPA13P48723 471 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 CSNK1DP48730 415 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 CLCN2P51788 898 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 SEMG2Q02383 582 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 RALGDSQ12967 914 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 NFATC2Q13469 925 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 RETREG3Q86VR2 466 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 CLDN19Q8N6F1 224 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 DCBLD1Q8N8Z6 715 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 KLHL23Q8NBE8 558 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 GRIN3AQ8TCU5 1115 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 NCSTNQ92542 709 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 SLC39A3Q9BRY0 314 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 PCDHAC1Q9H158 963 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 TLR9Q9NR96 1032 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 HCFC1R1Q9NWW0 138 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 UBAP1Q9NZ09 502 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 EIF2B4Q9UI10 523 aaKnown RBP13.22□□□□□ -0.29
VPS33B-202ENST00000535906 CNOT11Q9UKZ1 510 aaKnown RBP13.22□□□□□ -0.29
VPS33B-202ENST00000535906 PRSS21Q9Y6M0 314 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 SCN8AQ9UQD0 1980 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 PRORSD1PA6NEY8 169 aa13.21□□□□□ -0.29
VPS33B-202ENST00000535906 C9JVG2 144 aa13.21□□□□□ -0.29
VPS33B-202ENST00000535906 CRCPO75575 148 aa13.21□□□□□ -0.29
VPS33B-202ENST00000535906 BPIP17213 487 aa13.21□□□□□ -0.29
VPS33B-202ENST00000535906 LBPP18428 481 aa13.21□□□□□ -0.29
VPS33B-202ENST00000535906 ITGB6P18564 788 aa13.21□□□□□ -0.29
VPS33B-202ENST00000535906 GSTT1P30711 240 aa13.21□□□□□ -0.29
VPS33B-202ENST00000535906 RHDQ02161 417 aa13.21□□□□□ -0.29
VPS33B-202ENST00000535906 CREMQ03060 361 aa13.21□□□□□ -0.29
VPS33B-202ENST00000535906 C18orf21Q32NC0 220 aaPredicted RBP13.21□□□□□ -0.29
VPS33B-202ENST00000535906 IL23RQ5VWK5 629 aa13.21□□□□□ -0.29
VPS33B-202ENST00000535906 PTRHD1Q6GMV3 140 aaKnown RBP13.21□□□□□ -0.29
VPS33B-202ENST00000535906 C8orf82Q6P1X6 216 aaPredicted RBP13.21□□□□□ -0.29
VPS33B-202ENST00000535906 TSPAN33Q86UF1 283 aa13.21□□□□□ -0.29
VPS33B-202ENST00000535906 KREMEN2Q8NCW0 462 aa13.21□□□□□ -0.29
VPS33B-202ENST00000535906 OR2AP1Q8NGE2 309 aa13.21□□□□□ -0.29
VPS33B-202ENST00000535906 RIN3Q8TB24 985 aa13.21□□□□□ -0.29
VPS33B-202ENST00000535906 LKAAEAR1Q8TD35 194 aa13.21□□□□□ -0.29
VPS33B-202ENST00000535906 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.21□□□□□ -0.29
VPS33B-202ENST00000535906 ATP6V1E2Q96A05 226 aa13.21□□□□□ -0.29
VPS33B-202ENST00000535906 LRCH3Q96II8 777 aa13.21□□□□□ -0.29
VPS33B-202ENST00000535906 SLC45A3Q96JT2 553 aa13.21□□□□□ -0.29
VPS33B-202ENST00000535906 C17orf80Q9BSJ5 609 aa13.21□□□□□ -0.29
VPS33B-202ENST00000535906 TRIM4Q9C037 500 aa13.21□□□□□ -0.29
VPS33B-202ENST00000535906 CLPBQ9H078 707 aa13.21□□□□□ -0.29
VPS33B-202ENST00000535906 ATP13A3Q9H7F0 1226 aa13.21□□□□□ -0.29
VPS33B-202ENST00000535906 TMEM181Q9P2C4 612 aa13.21□□□□□ -0.29
VPS33B-202ENST00000535906 CD300AQ9UGN4 299 aa13.21□□□□□ -0.29
VPS33B-202ENST00000535906 PCDHB1Q9Y5F3 818 aa13.21□□□□□ -0.29
VPS33B-202ENST00000535906 CARNS1A5YM72 827 aa13.21□□□□□ -0.3
VPS33B-202ENST00000535906 CCL16O15467 120 aa13.21□□□□□ -0.3
VPS33B-202ENST00000535906 EFCAB14O75071 495 aa13.21□□□□□ -0.3
VPS33B-202ENST00000535906 SOCS5O75159 536 aa13.21□□□□□ -0.3
VPS33B-202ENST00000535906 MLYCDO95822 493 aa13.21□□□□□ -0.3
VPS33B-202ENST00000535906 IGSF6O95976 241 aa13.21□□□□□ -0.3
VPS33B-202ENST00000535906 SMIM18P0DKX4 95 aa13.21□□□□□ -0.3
VPS33B-202ENST00000535906 SRCP12931 536 aa13.21□□□□□ -0.3
VPS33B-202ENST00000535906 ZNF7P17097 686 aaPredicted RBP13.21□□□□□ -0.3
VPS33B-202ENST00000535906 HLA-FP30511 346 aa13.21□□□□□ -0.3
VPS33B-202ENST00000535906 DIO3P55073 304 aa13.21□□□□□ -0.3
VPS33B-202ENST00000535906 RBBP7Q16576 425 aa13.21□□□□□ -0.3
VPS33B-202ENST00000535906 SCIMPQ6UWF3 145 aa13.21□□□□□ -0.3
VPS33B-202ENST00000535906 SBSNQ6UWP8 590 aa13.21□□□□□ -0.3
VPS33B-202ENST00000535906 SNX20Q7Z614 316 aa13.21□□□□□ -0.3
VPS33B-202ENST00000535906 OR52B6Q8NGF0 335 aa13.21□□□□□ -0.3
VPS33B-202ENST00000535906 PDLIM5Q96HC4 596 aaKnown RBP13.21□□□□□ -0.3
VPS33B-202ENST00000535906 LMLNQ96KR4 655 aa13.21□□□□□ -0.3
VPS33B-202ENST00000535906 CDK15Q96Q40 435 aa13.21□□□□□ -0.3
VPS33B-202ENST00000535906 ACOX2Q99424 681 aa13.21□□□□□ -0.3
VPS33B-202ENST00000535906 CROTQ9UKG9 612 aa13.21□□□□□ -0.3
VPS33B-202ENST00000535906 AP4S1Q9Y587 144 aa13.21□□□□□ -0.3
VPS33B-202ENST00000535906 KIAA0100Q14667 2235 aaKnown RBP13.21□□□□□ -0.3
VPS33B-202ENST00000535906 SMIM31A0A1B0GVY4 71 aa13.2□□□□□ -0.3
VPS33B-202ENST00000535906 NPIPB15A6NHN6 443 aaPredicted RBP13.2□□□□□ -0.3
VPS33B-202ENST00000535906 NR5A2O00482 541 aa13.2□□□□□ -0.3
VPS33B-202ENST00000535906 BNIP3LO60238 219 aa13.2□□□□□ -0.3
VPS33B-202ENST00000535906 UROSP10746 265 aa13.2□□□□□ -0.3
VPS33B-202ENST00000535906 MAPK8P45983 427 aa13.2□□□□□ -0.3
VPS33B-202ENST00000535906 VPS26BQ4G0F5 336 aa13.2□□□□□ -0.3
VPS33B-202ENST00000535906 CCDC149Q6ZUS6 474 aa13.2□□□□□ -0.3
VPS33B-202ENST00000535906 MIER2Q8N344 545 aa13.2□□□□□ -0.3
VPS33B-202ENST00000535906 OR56A4Q8NGH8 313 aa13.2□□□□□ -0.3
VPS33B-202ENST00000535906 EPB41L1Q9H4G0 881 aa13.2□□□□□ -0.3
VPS33B-202ENST00000535906 SDR39U1Q9NRG7 319 aaPredicted RBP13.2□□□□□ -0.3
VPS33B-202ENST00000535906 MAP10Q9P2G4 905 aa13.2□□□□□ -0.3
VPS33B-202ENST00000535906 CHD7Q9P2D1 2997 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms