RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 FABP3P05413 133 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 HSPA7P48741 367 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 SLC20A2Q08357 652 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 LBX2Q6XYB7 198 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 HMCESQ96FZ2 354 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 MTHFRP42898 656 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 AVPR1BP47901 424 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 GTF2H2Q13888 395 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 TSC22D1Q15714 1073 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 SMU1Q2TAY7 513 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 MTX3Q5HYI7 312 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 GTF2H2CQ6P1K8 395 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 TCAF1Q9Y4C2 921 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 PCDHGC4Q9Y5F7 938 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 AP4B1Q9Y6B7 739 aa18.01■□□□□ 0.47
SFSWAP-203ENST00000535236 SRRM3A6NNA2 597 aaPredicted RBP18■□□□□ 0.47
SFSWAP-203ENST00000535236 AP2A1O95782 977 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 DNASE1L1P49184 302 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 GBE1Q04446 702 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 ENPEPQ07075 957 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 DDX59Q5T1V6 619 aaKnown RBP eCLIP18■□□□□ 0.47
SFSWAP-203ENST00000535236 SERPINA9Q86WD7 417 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 HID1Q8IV36 788 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 LEMD2Q8NC56 503 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 SLC44A1Q8WWI5 657 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 PIGKQ92643 395 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 CRELD1Q96HD1 420 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 SRMSQ9H3Y6 488 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 RIPK3Q9Y572 518 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 KCNU1A8MYU2 1149 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 SLC31A1O15431 190 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 CD247P20963 164 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 MAT2AP31153 395 aaKnown RBP18■□□□□ 0.47
SFSWAP-203ENST00000535236 RPL5P46777 297 aaKnown RBP18■□□□□ 0.47
SFSWAP-203ENST00000535236 VARS2Q5ST30 1063 aaKnown RBP18■□□□□ 0.47
SFSWAP-203ENST00000535236 ZCCHC12Q6PEW1 402 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 GALNT5Q7Z7M9 940 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 LDB1Q86U70 411 aaPredicted RBP18■□□□□ 0.47
SFSWAP-203ENST00000535236 CHID1Q9BWS9 393 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 CDH7Q9ULB5 785 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 PRR5-ARHGAP8B1AHC4 643 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 HCN1O60741 890 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 ARHGAP8P85298 464 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 TBC1D25Q3MII6 688 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 PLD5Q8N7P1 536 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 HAVCR1Q96D42 359 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 LRRC4CQ9HCJ2 640 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 ARHGEF4Q9NR80 690 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 PLLPQ9Y342 182 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 MATN3O15232 486 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 RLN1P04808 185 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 IFNW1P05000 195 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 PBX3P40426 434 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 NDST2P52849 883 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 PNLIPRP1P54315 467 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 RAB2AP61019 212 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 IL23RQ5VWK5 629 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 TMEM220Q6QAJ8 160 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 RALGPS2Q86X27 583 aaPredicted RBP18■□□□□ 0.47
SFSWAP-203ENST00000535236 GJD3Q8N144 294 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 ZNF433Q8N7K0 673 aaPredicted RBP18■□□□□ 0.47
SFSWAP-203ENST00000535236 CAPSLQ8WWF8 208 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 FATE1Q969F0 183 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 PCED1BQ96HM7 432 aa18■□□□□ 0.47
SFSWAP-203ENST00000535236 SLC38A8A6NNN8 435 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 TNFRSF11BO00300 401 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 TIPRLO75663 272 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 UBXN7O94888 489 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 FADS2O95864 444 aaKnown RBP17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 DRD4P21917 467 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 KCNJ2P63252 427 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 UBXN2BQ14CS0 331 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 SPRYD7Q5W111 196 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 FAM131AQ6UXB0 335 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 CIR1Q86X95 450 aaPredicted RBP17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 SNX33Q8WV41 574 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 SLC38A4Q969I6 547 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 PLEKHA1Q9HB21 404 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 GNEQ9Y223 722 aaKnown RBP17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 KLRG2A4D1S0 409 aaPredicted RBP17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 EDF1O60869 148 aaKnown RBP17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 PLEKHG4Q58EX7 1191 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 SULT1C3Q6IMI6 304 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 TAC4Q86UU9 113 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 C1orf127Q8N9H9 656 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 HNRNPABQ99729 332 aaKnown RBP17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 PTPN18Q99952 460 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 CALML5Q9NZT1 146 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 HEBP2Q9Y5Z4 205 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 DDX3YO15523 660 aaKnown RBP17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 USP2O75604 605 aaPredicted RBP17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 PRR5P85299 388 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 DCST1Q5T197 706 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 CRYBG2Q8N1P7 616 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 C2orf15Q8WU43 125 aaKnown RBP17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 KLHL32Q96NJ5 620 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 PCBD2Q9H0N5 130 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 FADS2P1A8MWK0 482 aa17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 CST3P01034 146 aaPredicted RBP17.99■□□□□ 0.47
SFSWAP-203ENST00000535236 RYKP34925 604 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms