RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 SCN8AQ9UQD0 1980 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 TRBV5-4A0A0C4DH59 114 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 FAM159BA6NKW6 160 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 MAGEC1O60732 1142 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 ENTPD5O75356 428 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 SLC34A2O95436 690 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 PAK4O96013 591 aaPredicted RBP12.18□□□□□ -0.46
SCARB1-204ENST00000535005 PYGLP06737 847 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 GCAP28676 217 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 CACNG1Q06432 222 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 RCN1Q15293 331 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 CHRNA6Q15825 494 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 WSCD2Q2TBF2 565 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 ARHGAP22Q7Z5H3 698 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 SNX20Q7Z614 316 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 C11orf74Q86VG3 221 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 KCNMB4Q86W47 210 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 CNTN4Q8IWV2 1026 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 UNC5BQ8IZJ1 945 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 FAM160A2Q8N612 972 aaPredicted RBP12.18□□□□□ -0.46
SCARB1-204ENST00000535005 TP53I13Q8NBR0 393 aaPredicted RBP12.18□□□□□ -0.46
SCARB1-204ENST00000535005 CALML6Q8TD86 181 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 MCUR1Q96AQ8 359 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 KLF6Q99612 283 aaPredicted RBP12.18□□□□□ -0.46
SCARB1-204ENST00000535005 ZNF184Q99676 751 aaPredicted RBP12.18□□□□□ -0.46
SCARB1-204ENST00000535005 RIOK2Q9BVS4 552 aaKnown RBP12.18□□□□□ -0.46
SCARB1-204ENST00000535005 CADM1Q9BY67 442 aaKnown RBP12.18□□□□□ -0.46
SCARB1-204ENST00000535005 ACSS3Q9H6R3 686 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 SMOXQ9NWM0 555 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 CD84Q9UIB8 345 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 RABGEF1Q9UJ41 708 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 SLC30A1Q9Y6M5 507 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 TRPM6Q9BX84 2022 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 PRR23AA6NEV1 266 aa12.17□□□□□ -0.46
SCARB1-204ENST00000535005 METTL12A8MUP2 240 aa12.17□□□□□ -0.46
SCARB1-204ENST00000535005 CD3EAPO15446 510 aaKnown RBP12.17□□□□□ -0.46
SCARB1-204ENST00000535005 GSC2O15499 205 aa12.17□□□□□ -0.46
SCARB1-204ENST00000535005 NDUFS2O75306 463 aa12.17□□□□□ -0.46
SCARB1-204ENST00000535005 CBX6O95503 412 aa12.17□□□□□ -0.46
SCARB1-204ENST00000535005 PRAMEF1O95521 474 aa12.17□□□□□ -0.46
SCARB1-204ENST00000535005 ERVK-10P10266 1014 aa12.17□□□□□ -0.46
SCARB1-204ENST00000535005 ITGALP20701 1170 aa12.17□□□□□ -0.46
SCARB1-204ENST00000535005 CLCN2P51788 898 aa12.17□□□□□ -0.46
SCARB1-204ENST00000535005 NFATC2Q13469 925 aa12.17□□□□□ -0.46
SCARB1-204ENST00000535005 THOC5Q13769 683 aaKnown RBP12.17□□□□□ -0.46
SCARB1-204ENST00000535005 ITGA9Q13797 1035 aa12.17□□□□□ -0.46
SCARB1-204ENST00000535005 TBCCQ15814 346 aa12.17□□□□□ -0.46
SCARB1-204ENST00000535005 KLHL38Q2WGJ6 581 aa12.17□□□□□ -0.46
SCARB1-204ENST00000535005 SETMARQ53H47 684 aaPredicted RBP12.17□□□□□ -0.46
SCARB1-204ENST00000535005 HSP90AA5PQ58FG0 334 aa12.17□□□□□ -0.46
SCARB1-204ENST00000535005 TEDDM1Q5T9Z0 273 aa12.17□□□□□ -0.46
SCARB1-204ENST00000535005 MRNIPQ6NTE8 343 aa12.17□□□□□ -0.46
SCARB1-204ENST00000535005 FAM151BQ6UXP7 276 aa12.17□□□□□ -0.46
SCARB1-204ENST00000535005 CAPN12Q6ZSI9 719 aa12.17□□□□□ -0.46
SCARB1-204ENST00000535005 GABPB2Q8TAK5 448 aaPredicted RBP12.17□□□□□ -0.46
SCARB1-204ENST00000535005 BIRC7Q96CA5 298 aa12.17□□□□□ -0.46
SCARB1-204ENST00000535005 VPS35Q96QK1 796 aa12.17□□□□□ -0.46
SCARB1-204ENST00000535005 TCF12Q99081 682 aa12.17□□□□□ -0.46
SCARB1-204ENST00000535005 CYTH2Q99418 400 aa12.17□□□□□ -0.46
SCARB1-204ENST00000535005 CATSPERZQ9NTU4 200 aa12.17□□□□□ -0.46
SCARB1-204ENST00000535005 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.17□□□□□ -0.46
SCARB1-204ENST00000535005 CUL9Q8IWT3 2517 aa12.17□□□□□ -0.46
SCARB1-204ENST00000535005 LRRK1Q38SD2 2015 aa12.17□□□□□ -0.46
SCARB1-204ENST00000535005 ZNF106Q9H2Y7 1883 aaKnown RBP12.17□□□□□ -0.46
SCARB1-204ENST00000535005 FAM86C2PA6NEL3 165 aa12.16□□□□□ -0.46
SCARB1-204ENST00000535005 OR51F1A6NGY5 319 aa12.16□□□□□ -0.46
SCARB1-204ENST00000535005 GOLGA8CPA6NN73 597 aa12.16□□□□□ -0.46
SCARB1-204ENST00000535005 GYG2O15488 501 aa12.16□□□□□ -0.46
SCARB1-204ENST00000535005 SOD1P00441 154 aa12.16□□□□□ -0.46
SCARB1-204ENST00000535005 OGNP20774 298 aaKnown RBP12.16□□□□□ -0.46
SCARB1-204ENST00000535005 CNR2P34972 360 aa12.16□□□□□ -0.46
SCARB1-204ENST00000535005 NAB1Q13506 487 aa12.16□□□□□ -0.46
SCARB1-204ENST00000535005 SEPT7Q16181 437 aaKnown RBP12.16□□□□□ -0.46
SCARB1-204ENST00000535005 TRMT5Q32P41 509 aaKnown RBP12.16□□□□□ -0.46
SCARB1-204ENST00000535005 ATP13A5Q4VNC0 1218 aa12.16□□□□□ -0.46
SCARB1-204ENST00000535005 KHDC1Q4VXA5 237 aaKnown RBP12.16□□□□□ -0.46
SCARB1-204ENST00000535005 FASTKD1Q53R41 847 aaKnown RBP12.16□□□□□ -0.46
SCARB1-204ENST00000535005 C6orf163Q5TEZ5 329 aa12.16□□□□□ -0.46
SCARB1-204ENST00000535005 ADAMTSL4Q6UY14 1074 aa12.16□□□□□ -0.46
SCARB1-204ENST00000535005 CERS6Q6ZMG9 384 aa12.16□□□□□ -0.46
SCARB1-204ENST00000535005 KIAA0408Q6ZU52 694 aa12.16□□□□□ -0.46
SCARB1-204ENST00000535005 PTAR1Q7Z6K3 402 aaPredicted RBP12.16□□□□□ -0.46
SCARB1-204ENST00000535005 GALNT7Q86SF2 657 aa12.16□□□□□ -0.46
SCARB1-204ENST00000535005 ADGRG6Q86SQ4 1221 aa12.16□□□□□ -0.46
SCARB1-204ENST00000535005 GAB3Q8WWW8 586 aa12.16□□□□□ -0.46
SCARB1-204ENST00000535005 CDKL2Q92772 493 aa12.16□□□□□ -0.46
SCARB1-204ENST00000535005 SKA1Q96BD8 255 aa12.16□□□□□ -0.46
SCARB1-204ENST00000535005 ULK4Q96C45 1275 aa12.16□□□□□ -0.46
SCARB1-204ENST00000535005 AGAP2Q99490 1192 aa12.16□□□□□ -0.46
SCARB1-204ENST00000535005 MIPEPQ99797 713 aa12.16□□□□□ -0.46
SCARB1-204ENST00000535005 CENPKQ9BS16 269 aa12.16□□□□□ -0.46
SCARB1-204ENST00000535005 SPATA16Q9BXB7 569 aa12.16□□□□□ -0.46
SCARB1-204ENST00000535005 DUSP15Q9H1R2 295 aaPredicted RBP12.16□□□□□ -0.46
SCARB1-204ENST00000535005 ASB8Q9H765 288 aa12.16□□□□□ -0.46
SCARB1-204ENST00000535005 GPAMQ9HCL2 828 aa12.16□□□□□ -0.46
SCARB1-204ENST00000535005 SMYD2Q9NRG4 433 aa12.16□□□□□ -0.46
SCARB1-204ENST00000535005 NSMCE4AQ9NXX6 385 aa12.16□□□□□ -0.46
SCARB1-204ENST00000535005 MARCH4Q9P2E8 410 aaPredicted RBP12.16□□□□□ -0.46
SCARB1-204ENST00000535005 INVSQ9Y283 1065 aa12.16□□□□□ -0.46
SCARB1-204ENST00000535005 HS3ST3A1Q9Y663 406 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms