RNA–Protein interactions for RNA: ENST00000533666.5

CMTM1-217, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-217ENST00000533666 UBA6A0AVT1 1052 aaPredicted RBP13.89□□□□□ -0.19
CMTM1-217ENST00000533666 AQP9O43315 295 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 DNAJC6O75061 913 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 ESR1P03372 595 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 ANXA6P08133 673 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 SSTR1P30872 391 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 ADARP55265 1226 aaKnown RBP13.89□□□□□ -0.19
CMTM1-217ENST00000533666 ARHGAP8P85298 464 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 NAB1Q13506 487 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 INSCQ1MX18 579 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 ERCC6LQ2NKX8 1250 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 MAP9Q49MG5 647 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 PRAMEF14Q5SWL7 426 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 ZNF648Q5T619 568 aaPredicted RBP13.89□□□□□ -0.19
CMTM1-217ENST00000533666 PTRHD1Q6GMV3 140 aaKnown RBP13.89□□□□□ -0.19
CMTM1-217ENST00000533666 LVRNQ6Q4G3 990 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 CRTC3Q6UUV7 619 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 CAPN12Q6ZSI9 719 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 DET1Q7L5Y6 550 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 TAF8Q7Z7C8 310 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 GALNT7Q86SF2 657 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 AMZ2Q86W34 360 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 SLC26A11Q86WA9 606 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 CNTN4Q8IWV2 1026 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 ZNF548Q8NEK5 533 aaPredicted RBP13.89□□□□□ -0.19
CMTM1-217ENST00000533666 GLMNQ92990 594 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 SGF29Q96ES7 293 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 PANX3Q96QZ0 392 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 WDR83Q9BRX9 315 aaKnown RBP13.89□□□□□ -0.19
CMTM1-217ENST00000533666 DUSP23Q9BVJ7 150 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 LRRC4CQ9HCJ2 640 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 EVA1BQ9NVM1 165 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 MOCS1Q9NZB8 636 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 MARCH4Q9P2E8 410 aaPredicted RBP13.89□□□□□ -0.19
CMTM1-217ENST00000533666 FBXO5Q9UKT4 447 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 COMMD10Q9Y6G5 202 aa13.89□□□□□ -0.19
CMTM1-217ENST00000533666 TCRBV9S1A1TA0A576 114 aa13.88□□□□□ -0.19
CMTM1-217ENST00000533666 OR2AG2A6NM03 316 aa13.88□□□□□ -0.19
CMTM1-217ENST00000533666 LMO7DNF2Z398 122 aa13.88□□□□□ -0.19
CMTM1-217ENST00000533666 TPP1O14773 563 aa13.88□□□□□ -0.19
CMTM1-217ENST00000533666 SCAMP1O15126 338 aa13.88□□□□□ -0.19
CMTM1-217ENST00000533666 KPNA5O15131 536 aa13.88□□□□□ -0.19
CMTM1-217ENST00000533666 PRSS56P0CW18 603 aa13.88□□□□□ -0.19
CMTM1-217ENST00000533666 SLC2A4P14672 509 aa13.88□□□□□ -0.19
CMTM1-217ENST00000533666 TGM1P22735 817 aa13.88□□□□□ -0.19
CMTM1-217ENST00000533666 RPS3P23396 243 aaKnown RBP eCLIP13.88□□□□□ -0.19
CMTM1-217ENST00000533666 DGKAP23743 735 aa13.88□□□□□ -0.19
CMTM1-217ENST00000533666 SLC1A2P43004 574 aa13.88□□□□□ -0.19
CMTM1-217ENST00000533666 PRLHRP49683 370 aa13.88□□□□□ -0.19
CMTM1-217ENST00000533666 PMS2P54278 862 aa13.88□□□□□ -0.19
CMTM1-217ENST00000533666 EIF3BP55884 814 aaKnown RBP13.88□□□□□ -0.19
CMTM1-217ENST00000533666 PLOD1Q02809 727 aaPredicted RBP13.88□□□□□ -0.19
CMTM1-217ENST00000533666 KYNUQ16719 465 aa13.88□□□□□ -0.19
CMTM1-217ENST00000533666 KHDC1Q4VXA5 237 aaKnown RBP13.88□□□□□ -0.19
CMTM1-217ENST00000533666 CHST15Q7LFX5 561 aaPredicted RBP13.88□□□□□ -0.19
CMTM1-217ENST00000533666 CNPY4Q8N129 248 aa13.88□□□□□ -0.19
CMTM1-217ENST00000533666 BEND7Q8N7W2 519 aaPredicted RBP13.88□□□□□ -0.19
CMTM1-217ENST00000533666 C2CD4AQ8NCU7 369 aaPredicted RBP13.88□□□□□ -0.19
CMTM1-217ENST00000533666 GPBAR1Q8TDU6 330 aa13.88□□□□□ -0.19
CMTM1-217ENST00000533666 SAP25Q8TEE9 199 aa13.88□□□□□ -0.19
CMTM1-217ENST00000533666 LINC00615Q96LM1 132 aaPredicted RBP13.88□□□□□ -0.19
CMTM1-217ENST00000533666 CYTH2Q99418 400 aa13.88□□□□□ -0.19
CMTM1-217ENST00000533666 CCM2Q9BSQ5 444 aa13.88□□□□□ -0.19
CMTM1-217ENST00000533666 LRRC61Q9BV99 259 aa13.88□□□□□ -0.19
CMTM1-217ENST00000533666 TMEM168Q9H0V1 697 aa13.88□□□□□ -0.19
CMTM1-217ENST00000533666 RRAGDQ9NQL2 400 aaPredicted RBP13.88□□□□□ -0.19
CMTM1-217ENST00000533666 IL1RAPL1Q9NZN1 696 aa13.88□□□□□ -0.19
CMTM1-217ENST00000533666 NCKIPSDQ9NZQ3 722 aa13.88□□□□□ -0.19
CMTM1-217ENST00000533666 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.88□□□□□ -0.19
CMTM1-217ENST00000533666 KLF15Q9UIH9 416 aa13.88□□□□□ -0.19
CMTM1-217ENST00000533666 CORO1CQ9ULV4 474 aaPredicted RBP13.88□□□□□ -0.19
CMTM1-217ENST00000533666 V9GYY5 206 aaPredicted RBP13.88□□□□□ -0.19
CMTM1-217ENST00000533666 C17orf113A0A1B0GUU1 675 aa13.87□□□□□ -0.19
CMTM1-217ENST00000533666 MGAT4DA6NG13 374 aa13.87□□□□□ -0.19
CMTM1-217ENST00000533666 FLRT2O43155 660 aa13.87□□□□□ -0.19
CMTM1-217ENST00000533666 POP7O75817 140 aaKnown RBP13.87□□□□□ -0.19
CMTM1-217ENST00000533666 S1PR4O95977 384 aa13.87□□□□□ -0.19
CMTM1-217ENST00000533666 ACP5P13686 325 aa13.87□□□□□ -0.19
CMTM1-217ENST00000533666 SDHBP21912 280 aa13.87□□□□□ -0.19
CMTM1-217ENST00000533666 IDSP22304 550 aa13.87□□□□□ -0.19
CMTM1-217ENST00000533666 GRK6P43250 576 aa13.87□□□□□ -0.19
CMTM1-217ENST00000533666 LEPRP48357 1165 aaKnown RBP13.87□□□□□ -0.19
CMTM1-217ENST00000533666 CD151P48509 253 aa13.87□□□□□ -0.19
CMTM1-217ENST00000533666 CLCNKAP51800 687 aa13.87□□□□□ -0.19
CMTM1-217ENST00000533666 LIMK1P53667 647 aa13.87□□□□□ -0.19
CMTM1-217ENST00000533666 B4GALNT1Q00973 533 aa13.87□□□□□ -0.19
CMTM1-217ENST00000533666 IL9RQ01113 521 aa13.87□□□□□ -0.19
CMTM1-217ENST00000533666 CTBSQ01459 385 aa13.87□□□□□ -0.19
CMTM1-217ENST00000533666 CTBP1Q13363 440 aa13.87□□□□□ -0.19
CMTM1-217ENST00000533666 SEMA3AQ14563 771 aa13.87□□□□□ -0.19
CMTM1-217ENST00000533666 TMED2Q15363 201 aa13.87□□□□□ -0.19
CMTM1-217ENST00000533666 SMAD1Q15797 465 aaKnown RBP13.87□□□□□ -0.19
CMTM1-217ENST00000533666 UAP1L1Q3KQV9 507 aa13.87□□□□□ -0.19
CMTM1-217ENST00000533666 TEDDM1Q5T9Z0 273 aa13.87□□□□□ -0.19
CMTM1-217ENST00000533666 EMBQ6PCB8 327 aa13.87□□□□□ -0.19
CMTM1-217ENST00000533666 TRMT10BQ6PF06 316 aaKnown RBP13.87□□□□□ -0.19
CMTM1-217ENST00000533666 LDB1Q86U70 411 aaPredicted RBP13.87□□□□□ -0.19
CMTM1-217ENST00000533666 CTAGE3PQ8IX95 158 aa13.87□□□□□ -0.19
CMTM1-217ENST00000533666 CLDN19Q8N6F1 224 aa13.87□□□□□ -0.19
CMTM1-217ENST00000533666 LPGAT1Q92604 370 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms