RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 OR10H2O60403 315 aa17.39■□□□□ 0.38
PHRF1-205ENST00000533464 PTSQ03393 145 aa17.39■□□□□ 0.38
PHRF1-205ENST00000533464 OLIG2Q13516 323 aa17.39■□□□□ 0.38
PHRF1-205ENST00000533464 DEF8Q6ZN54 512 aa17.39■□□□□ 0.38
PHRF1-205ENST00000533464 CFAP206Q8IYR0 622 aa17.39■□□□□ 0.38
PHRF1-205ENST00000533464 AASDHPPTQ9NRN7 309 aa17.39■□□□□ 0.38
PHRF1-205ENST00000533464 J3KR12 359 aa17.39■□□□□ 0.37
PHRF1-205ENST00000533464 PEX2P28328 305 aa17.39■□□□□ 0.37
PHRF1-205ENST00000533464 MTHFRP42898 656 aa17.39■□□□□ 0.37
PHRF1-205ENST00000533464 ITGA1P56199 1179 aa17.39■□□□□ 0.37
PHRF1-205ENST00000533464 CYP4F8P98187 520 aa17.39■□□□□ 0.37
PHRF1-205ENST00000533464 RGS1Q08116 209 aa17.39■□□□□ 0.37
PHRF1-205ENST00000533464 TCEAL1Q15170 157 aa17.39■□□□□ 0.37
PHRF1-205ENST00000533464 C1orf220Q5T0J3 134 aa17.39■□□□□ 0.37
PHRF1-205ENST00000533464 C6orf52Q5T4I8 152 aa17.39■□□□□ 0.37
PHRF1-205ENST00000533464 RERGQ96A58 199 aaPredicted RBP17.39■□□□□ 0.37
PHRF1-205ENST00000533464 ZNF607Q96SK3 696 aa17.39■□□□□ 0.37
PHRF1-205ENST00000533464 ZNF395Q9H8N7 513 aaPredicted RBP17.39■□□□□ 0.37
PHRF1-205ENST00000533464 PHPT1Q9NRX4 125 aaPredicted RBP17.39■□□□□ 0.37
PHRF1-205ENST00000533464 HS3ST4Q9Y661 456 aa17.39■□□□□ 0.37
PHRF1-205ENST00000533464 SLC28A2O43868 658 aa17.39■□□□□ 0.37
PHRF1-205ENST00000533464 PDE9AO76083 593 aa17.39■□□□□ 0.37
PHRF1-205ENST00000533464 NFATC1O95644 943 aa17.39■□□□□ 0.37
PHRF1-205ENST00000533464 SULT1C3Q6IMI6 304 aa17.39■□□□□ 0.37
PHRF1-205ENST00000533464 PAQR3Q6TCH7 311 aa17.39■□□□□ 0.37
PHRF1-205ENST00000533464 GET4Q7L5D6 327 aaPredicted RBP17.39■□□□□ 0.37
PHRF1-205ENST00000533464 KLHL32Q96NJ5 620 aa17.39■□□□□ 0.37
PHRF1-205ENST00000533464 AIF1LQ9BQI0 150 aa17.39■□□□□ 0.37
PHRF1-205ENST00000533464 HEPHQ9BQS7 1158 aa17.39■□□□□ 0.37
PHRF1-205ENST00000533464 FNDC11Q9BVV2 318 aa17.39■□□□□ 0.37
PHRF1-205ENST00000533464 H0YGN5 161 aa17.39■□□□□ 0.37
PHRF1-205ENST00000533464 ADGRF1Q5T601 910 aa17.39■□□□□ 0.37
PHRF1-205ENST00000533464 DNAJB7Q7Z6W7 309 aaPredicted RBP17.39■□□□□ 0.37
PHRF1-205ENST00000533464 HIPK1Q86Z02 1210 aa17.39■□□□□ 0.37
PHRF1-205ENST00000533464 PHYKPLQ8IUZ5 450 aa17.39■□□□□ 0.37
PHRF1-205ENST00000533464 AMER2Q8N7J2 671 aa17.39■□□□□ 0.37
PHRF1-205ENST00000533464 KREMEN2Q8NCW0 462 aa17.39■□□□□ 0.37
PHRF1-205ENST00000533464 NFS1Q9Y697 457 aa17.39■□□□□ 0.37
PHRF1-205ENST00000533464 KDM3BQ7LBC6 1761 aa17.38■□□□□ 0.37
PHRF1-205ENST00000533464 ANXA4P09525 319 aaPredicted RBP17.38■□□□□ 0.37
PHRF1-205ENST00000533464 RFTN1Q14699 578 aaPredicted RBP17.38■□□□□ 0.37
PHRF1-205ENST00000533464 PITRM1Q5JRX3 1037 aa17.38■□□□□ 0.37
PHRF1-205ENST00000533464 Q96MT0 163 aa17.38■□□□□ 0.37
PHRF1-205ENST00000533464 MCMBPQ9BTE3 642 aa17.38■□□□□ 0.37
PHRF1-205ENST00000533464 ABCB8Q9NUT2 735 aa17.38■□□□□ 0.37
PHRF1-205ENST00000533464 NSG1P42857 185 aa17.38■□□□□ 0.37
PHRF1-205ENST00000533464 STX4Q12846 297 aa17.38■□□□□ 0.37
PHRF1-205ENST00000533464 PAFAH1B3Q15102 231 aaKnown RBP17.38■□□□□ 0.37
PHRF1-205ENST00000533464 MCM8Q9UJA3 840 aa17.38■□□□□ 0.37
PHRF1-205ENST00000533464 OGDHLQ9ULD0 1010 aa17.38■□□□□ 0.37
PHRF1-205ENST00000533464 ERGIC3Q9Y282 383 aa17.38■□□□□ 0.37
PHRF1-205ENST00000533464 PER2O15055 1255 aa17.38■□□□□ 0.37
PHRF1-205ENST00000533464 ASMTP46597 345 aa17.38■□□□□ 0.37
PHRF1-205ENST00000533464 UGT2B15P54855 530 aa17.38■□□□□ 0.37
PHRF1-205ENST00000533464 ACSBG2Q5FVE4 666 aa17.38■□□□□ 0.37
PHRF1-205ENST00000533464 CCNYL2Q5T2Q4 361 aa17.38■□□□□ 0.37
PHRF1-205ENST00000533464 CBR4Q8N4T8 237 aa17.38■□□□□ 0.37
PHRF1-205ENST00000533464 GSTK1Q9Y2Q3 226 aa17.38■□□□□ 0.37
PHRF1-205ENST00000533464 PTPN2P17706 415 aa17.38■□□□□ 0.37
PHRF1-205ENST00000533464 PSMD8P48556 350 aa17.38■□□□□ 0.37
PHRF1-205ENST00000533464 KCNQ1P51787 676 aa17.38■□□□□ 0.37
PHRF1-205ENST00000533464 LRRC73Q5JTD7 316 aa17.38■□□□□ 0.37
PHRF1-205ENST00000533464 PARP8Q8N3A8 854 aa17.38■□□□□ 0.37
PHRF1-205ENST00000533464 OR52L1Q8NGH7 329 aa17.38■□□□□ 0.37
PHRF1-205ENST00000533464 CDKN2AIPNLQ96HQ2 116 aa17.38■□□□□ 0.37
PHRF1-205ENST00000533464 PIWIL1Q96J94 861 aaKnown RBP17.38■□□□□ 0.37
PHRF1-205ENST00000533464 TCF25Q9BQ70 676 aa17.38■□□□□ 0.37
PHRF1-205ENST00000533464 OR10H1Q9Y4A9 318 aa17.38■□□□□ 0.37
PHRF1-205ENST00000533464 TELO2Q9Y4R8 837 aa17.38■□□□□ 0.37
PHRF1-205ENST00000533464 FPGTO14772 594 aa17.37■□□□□ 0.37
PHRF1-205ENST00000533464 ACVRL1P37023 503 aa17.37■□□□□ 0.37
PHRF1-205ENST00000533464 CSKP41240 450 aa17.37■□□□□ 0.37
PHRF1-205ENST00000533464 ZNF57Q68EA5 555 aaPredicted RBP17.37■□□□□ 0.37
PHRF1-205ENST00000533464 ANKRD46Q86W74 232 aa17.37■□□□□ 0.37
PHRF1-205ENST00000533464 ROPN1LQ96C74 230 aa17.37■□□□□ 0.37
PHRF1-205ENST00000533464 AHSGP02765 367 aa17.37■□□□□ 0.37
PHRF1-205ENST00000533464 ENO2P09104 434 aaPredicted RBP17.37■□□□□ 0.37
PHRF1-205ENST00000533464 SF1Q15637 639 aaKnown RBP17.37■□□□□ 0.37
PHRF1-205ENST00000533464 PSRC1Q6PGN9 363 aaPredicted RBP17.37■□□□□ 0.37
PHRF1-205ENST00000533464 ARHGAP22Q7Z5H3 698 aa17.37■□□□□ 0.37
PHRF1-205ENST00000533464 DGCR14Q96DF8 476 aaKnown RBP17.37■□□□□ 0.37
PHRF1-205ENST00000533464 SMOC2Q9H3U7 446 aa17.37■□□□□ 0.37
PHRF1-205ENST00000533464 TFB2MQ9H5Q4 396 aaKnown RBP17.37■□□□□ 0.37
PHRF1-205ENST00000533464 CRTAC1Q9NQ79 661 aa17.37■□□□□ 0.37
PHRF1-205ENST00000533464 SLC2A6Q9UGQ3 507 aa17.37■□□□□ 0.37
PHRF1-205ENST00000533464 AP3D1O14617 1153 aa17.37■□□□□ 0.37
PHRF1-205ENST00000533464 NBNO60934 754 aa17.37■□□□□ 0.37
PHRF1-205ENST00000533464 OR6B1O95007 311 aa17.37■□□□□ 0.37
PHRF1-205ENST00000533464 SIX3O95343 332 aaPredicted RBP17.37■□□□□ 0.37
PHRF1-205ENST00000533464 ZBTB11O95625 1053 aaPredicted RBP17.37■□□□□ 0.37
PHRF1-205ENST00000533464 DBTP11182 482 aaKnown RBP17.37■□□□□ 0.37
PHRF1-205ENST00000533464 CCNA2P20248 432 aa17.37■□□□□ 0.37
PHRF1-205ENST00000533464 CSNK2BP67870 215 aa17.37■□□□□ 0.37
PHRF1-205ENST00000533464 C2orf80Q0P641 193 aa17.37■□□□□ 0.37
PHRF1-205ENST00000533464 SIM2Q14190 667 aaPredicted RBP17.37■□□□□ 0.37
PHRF1-205ENST00000533464 ZC3HC1Q86WB0 502 aaKnown RBP17.37■□□□□ 0.37
PHRF1-205ENST00000533464 PLEKHG4BQ96PX9 1271 aa17.37■□□□□ 0.37
PHRF1-205ENST00000533464 ZNF780BQ9Y6R6 833 aa17.37■□□□□ 0.37
PHRF1-205ENST00000533464 PIRO00625 290 aa17.37■□□□□ 0.37
PHRF1-205ENST00000533464 NIPSNAP2O75323 286 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms