RNA–Protein interactions for RNA: ENST00000533370.1

TGFBR3-211, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-211ENST00000533370 ANKRD49Q8WVL7 239 aa12.12□□□□□ -0.47
TGFBR3-211ENST00000533370 SREK1Q8WXA9 508 aaKnown RBP12.12□□□□□ -0.47
TGFBR3-211ENST00000533370 CHMP6Q96FZ7 201 aa12.12□□□□□ -0.47
TGFBR3-211ENST00000533370 SCYL1Q96KG9 808 aa12.12□□□□□ -0.47
TGFBR3-211ENST00000533370 PANX3Q96QZ0 392 aa12.12□□□□□ -0.47
TGFBR3-211ENST00000533370 C1QTNF7Q9BXJ2 289 aa12.12□□□□□ -0.47
TGFBR3-211ENST00000533370 SLC17A9Q9BYT1 436 aa12.12□□□□□ -0.47
TGFBR3-211ENST00000533370 EPHX3Q9H6B9 360 aa12.12□□□□□ -0.47
TGFBR3-211ENST00000533370 SPATS2LQ9NUQ6 558 aaKnown RBP12.12□□□□□ -0.47
TGFBR3-211ENST00000533370 GALPQ9UBC7 116 aa12.12□□□□□ -0.47
TGFBR3-211ENST00000533370 PRSS21Q9Y6M0 314 aa12.12□□□□□ -0.47
TGFBR3-211ENST00000533370 TCF20Q9UGU0 1960 aaKnown RBP12.12□□□□□ -0.47
TGFBR3-211ENST00000533370 EYSQ5T1H1 3165 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 PRUNE2Q8WUY3 3088 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 A0A1W2PQU0 124 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 WDR91A4D1P6 747 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 TCP11X1B4DZS4 312 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 TARM1B6A8C7 271 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 KLF11O14901 512 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 KPNA5O15131 536 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 TRIM16O95361 564 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 SOD1P00441 154 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 IGLV3-19P01714 112 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 VIMP08670 466 aaKnown RBP12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 CBSLP0DN79 551 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 ZNF37AP17032 561 aaPredicted RBP12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 TAC1P20366 129 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 DGKAP23743 735 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 OXTRP30559 389 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 CBSP35520 551 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 PRKAA2P54646 552 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 ADPRHP54922 357 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 TMEM115Q12893 351 aaPredicted RBP12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 WSCD2Q2TBF2 565 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 TMEM259Q4ZIN3 620 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 RAET1GQ6H3X3 334 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 LRRC8EQ6NSJ5 796 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 Q6ZS52 159 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 SPATA6LQ8N4H0 392 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 SIDT2Q8NBJ9 832 aaKnown RBP12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 RHEBL1Q8TAI7 183 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 CD200R1Q8TD46 325 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 HMGB4Q8WW32 186 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 CLDN23Q96B33 292 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 HIC2Q96JB3 615 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 ZNF317Q96PQ6 595 aaPredicted RBP12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 ASB2Q96Q27 587 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 ZCCHC2Q9C0B9 1178 aaKnown RBP12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 DERL2Q9GZP9 239 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 MRPL46Q9H2W6 279 aaKnown RBP12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 TFB2MQ9H5Q4 396 aaKnown RBP12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 MANSC1Q9H8J5 431 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 SGK2Q9HBY8 427 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 TRIM39Q9HCM9 518 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 SIRPGQ9P1W8 387 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 COPG2Q9UBF2 871 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 ZFR2Q9UPR6 939 aaKnown RBP12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 CKAP5Q14008 2032 aa12.11□□□□□ -0.47
TGFBR3-211ENST00000533370 LRRC72A6NJI9 287 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 IQCF5A8MTL0 148 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 G3V2L1 256 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 K7ESM1 405 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 VEGFDO43915 354 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 PAK4O96013 591 aaPredicted RBP12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 FTH1P02794 183 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 MYL2P10916 166 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 CD1DP15813 335 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 ALDH3A1P30838 453 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 GLRBP48167 497 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 RGS4P49798 205 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 SEC24CP53992 1094 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 IRX4P78413 519 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 ASPHQ12797 758 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 TUSC1Q2TAM9 212 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 TTLL9Q3SXZ7 439 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 ATG16L1Q676U5 607 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 SEL1L3Q68CR1 1132 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 ZYG11AQ6WRX3 759 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 TRIM67Q6ZTA4 783 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 OTOAQ7RTW8 1153 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 ISCA2Q86U28 154 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 PGBD3Q8N328 593 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 ZBTB2Q8N680 514 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 OR2T34Q8NGX1 318 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 EEF1AKMT1Q8WVE0 214 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 KIAA1191Q96A73 305 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 CCDC126Q96EE4 140 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 SGF29Q96ES7 293 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 CCDC97Q96F63 343 aaPredicted RBP12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 ZNF514Q96K75 400 aaPredicted RBP12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 LENG8Q96PV6 779 aaPredicted RBP12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 BTBD1Q9H0C5 482 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 TBC1D17Q9HA65 648 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 SARS2Q9NP81 518 aaKnown RBP12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 USP36Q9P275 1121 aaKnown RBP12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 EBF1Q9UH73 591 aa12.1□□□□□ -0.47
TGFBR3-211ENST00000533370 EIF3FO00303 357 aaPredicted RBP12.09□□□□□ -0.47
TGFBR3-211ENST00000533370 INPP4BO15327 924 aa12.09□□□□□ -0.47
TGFBR3-211ENST00000533370 SGTAO43765 313 aa12.09□□□□□ -0.47
TGFBR3-211ENST00000533370 H2AFYO75367 372 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms