RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 LYSMD1Q96S90 227 aa12.78□□□□□ -0.36
COPB1-209ENST00000533096 CEP41Q9BYV8 373 aa12.78□□□□□ -0.36
COPB1-209ENST00000533096 CHST8Q9H2A9 424 aa12.78□□□□□ -0.36
COPB1-209ENST00000533096 WASH6PQ9NQA3 447 aa12.78□□□□□ -0.36
COPB1-209ENST00000533096 KCND1Q9NSA2 647 aa12.78□□□□□ -0.36
COPB1-209ENST00000533096 POT1Q9NUX5 634 aa12.78□□□□□ -0.36
COPB1-209ENST00000533096 ZNF451Q9Y4E5 1061 aa12.78□□□□□ -0.36
COPB1-209ENST00000533096 UTP20O75691 2785 aaKnown RBP12.78□□□□□ -0.36
COPB1-209ENST00000533096 GOLGA6L3A6NEY3 463 aa12.77□□□□□ -0.37
COPB1-209ENST00000533096 CHUKO15111 745 aa12.77□□□□□ -0.37
COPB1-209ENST00000533096 DPM1O60762 260 aa12.77□□□□□ -0.37
COPB1-209ENST00000533096 SORBS2O94875 1100 aaKnown RBP12.77□□□□□ -0.37
COPB1-209ENST00000533096 KLK3P07288 261 aaPredicted RBP12.77□□□□□ -0.37
COPB1-209ENST00000533096 MMP2P08253 660 aa12.77□□□□□ -0.37
COPB1-209ENST00000533096 VCLP18206 1134 aa12.77□□□□□ -0.37
COPB1-209ENST00000533096 ARCN1P48444 511 aaKnown RBP12.77□□□□□ -0.37
COPB1-209ENST00000533096 GBE1Q04446 702 aa12.77□□□□□ -0.37
COPB1-209ENST00000533096 TMEM115Q12893 351 aaPredicted RBP12.77□□□□□ -0.37
COPB1-209ENST00000533096 GTF2H3Q13889 308 aa12.77□□□□□ -0.37
COPB1-209ENST00000533096 PAFAH1B3Q15102 231 aaKnown RBP12.77□□□□□ -0.37
COPB1-209ENST00000533096 NR6A1Q15406 480 aa12.77□□□□□ -0.37
COPB1-209ENST00000533096 NFKBIBQ15653 356 aa12.77□□□□□ -0.37
COPB1-209ENST00000533096 KYNUQ16719 465 aa12.77□□□□□ -0.37
COPB1-209ENST00000533096 HADHQ16836 314 aaKnown RBP12.77□□□□□ -0.37
COPB1-209ENST00000533096 KHDC1Q4VXA5 237 aaKnown RBP12.77□□□□□ -0.37
COPB1-209ENST00000533096 DNTTIP2Q5QJE6 756 aaKnown RBP12.77□□□□□ -0.37
COPB1-209ENST00000533096 LCN10Q6JVE6 187 aa12.77□□□□□ -0.37
COPB1-209ENST00000533096 KLHL35Q6PF15 583 aa12.77□□□□□ -0.37
COPB1-209ENST00000533096 APTXQ7Z2E3 356 aaKnown RBP12.77□□□□□ -0.37
COPB1-209ENST00000533096 ZNF547Q8IVP9 402 aa12.77□□□□□ -0.37
COPB1-209ENST00000533096 RAVER1Q8IY67 606 aaKnown RBP12.77□□□□□ -0.37
COPB1-209ENST00000533096 TRAM1L1Q8N609 369 aa12.77□□□□□ -0.37
COPB1-209ENST00000533096 TRIM11Q96F44 468 aa12.77□□□□□ -0.37
COPB1-209ENST00000533096 ZNF514Q96K75 400 aaPredicted RBP12.77□□□□□ -0.37
COPB1-209ENST00000533096 TSGA13Q96PP4 275 aa12.77□□□□□ -0.37
COPB1-209ENST00000533096 ZSCAN5AQ9BUG6 496 aa12.77□□□□□ -0.37
COPB1-209ENST00000533096 NUP85Q9BW27 656 aa12.77□□□□□ -0.37
COPB1-209ENST00000533096 SLC29A3Q9BZD2 475 aa12.77□□□□□ -0.37
COPB1-209ENST00000533096 MLXIPLQ9NP71 852 aa12.77□□□□□ -0.37
COPB1-209ENST00000533096 ANO10Q9NW15 660 aa12.77□□□□□ -0.37
COPB1-209ENST00000533096 HRASLS2Q9NWW9 162 aa12.77□□□□□ -0.37
COPB1-209ENST00000533096 CHMP5Q9NZZ3 219 aa12.77□□□□□ -0.37
COPB1-209ENST00000533096 EPHA6Q9UF33 1036 aa12.77□□□□□ -0.37
COPB1-209ENST00000533096 ERRFI1Q9UJM3 462 aaPredicted RBP12.77□□□□□ -0.37
COPB1-209ENST00000533096 ANAPC7Q9UJX3 599 aa12.77□□□□□ -0.37
COPB1-209ENST00000533096 G3BP2Q9UN86 482 aaKnown RBP12.77□□□□□ -0.37
COPB1-209ENST00000533096 SRPK3Q9UPE1 567 aa12.77□□□□□ -0.37
COPB1-209ENST00000533096 PCDHGA9Q9Y5G4 932 aaKnown RBP12.77□□□□□ -0.37
COPB1-209ENST00000533096 CFAP20Q9Y6A4 193 aaKnown RBP12.77□□□□□ -0.37
COPB1-209ENST00000533096 NBASA2RRP1 2371 aa12.77□□□□□ -0.37
COPB1-209ENST00000533096 LRRK2Q5S007 2527 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 MYO1FO00160 1098 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 VEGFDO43915 354 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 POP7O75817 140 aaKnown RBP12.76□□□□□ -0.37
COPB1-209ENST00000533096 TMEM63AO94886 807 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 BPIP17213 487 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 HSD11B2P80365 405 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 SLC25A11Q02978 314 aaKnown RBP12.76□□□□□ -0.37
COPB1-209ENST00000533096 SLC10A2Q12908 348 aaPredicted RBP12.76□□□□□ -0.37
COPB1-209ENST00000533096 GPS2Q13227 327 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 DPYSL3Q14195 570 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 RPE65Q16518 533 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 PLEKHN1Q494U1 663 aaPredicted RBP12.76□□□□□ -0.37
COPB1-209ENST00000533096 E4F1Q66K89 784 aaPredicted RBP12.76□□□□□ -0.37
COPB1-209ENST00000533096 CCDC70Q6NSX1 233 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 ARMC6Q6NXE6 501 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 B4GALNT4Q76KP1 1039 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 TMC3Q7Z5M5 1100 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 BPHLQ86WA6 291 aaPredicted RBP12.76□□□□□ -0.37
COPB1-209ENST00000533096 CPNE8Q86YQ8 564 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 RBM12BQ8IXT5 1001 aaKnown RBP12.76□□□□□ -0.37
COPB1-209ENST00000533096 CNTD1Q8N815 330 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 SLC38A9Q8NBW4 561 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 CLIP3Q96DZ5 547 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 TCTN2Q96GX1 697 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 SLC41A2Q96JW4 573 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 AGAP3Q96P47 875 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 FCRL4Q96PJ5 515 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 TIMM29Q9BSF4 260 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 NUDT9Q9BW91 350 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 THAP2Q9H0W7 228 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 ISCUQ9H1K1 167 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 RAD18Q9NS91 495 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 ASF1BQ9NVP2 202 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 AIPL1Q9NZN9 384 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 FAM8A1Q9UBU6 413 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 AMACRQ9UHK6 382 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 MYO6Q9UM54 1294 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 SNX7Q9UNH6 387 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 USP9YO00507 2555 aaPredicted RBP12.76□□□□□ -0.37
COPB1-209ENST00000533096 NOTCH2Q04721 2471 aa12.76□□□□□ -0.37
COPB1-209ENST00000533096 OR6C74A6NCV1 312 aa12.75□□□□□ -0.37
COPB1-209ENST00000533096 GPR89AB7ZAQ6 455 aa12.75□□□□□ -0.37
COPB1-209ENST00000533096 AURKAO14965 403 aa12.75□□□□□ -0.37
COPB1-209ENST00000533096 UGT1A9O60656 530 aa12.75□□□□□ -0.37
COPB1-209ENST00000533096 CPNE3O75131 537 aaKnown RBP12.75□□□□□ -0.37
COPB1-209ENST00000533096 LCA5LO95447 670 aa12.75□□□□□ -0.37
COPB1-209ENST00000533096 GPR89BP0CG08 455 aa12.75□□□□□ -0.37
COPB1-209ENST00000533096 UGT1A6P19224 532 aa12.75□□□□□ -0.37
COPB1-209ENST00000533096 UGT1A1P22309 533 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms