RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 ZRANB2O95218 330 aaKnown RBP eCLIP17.51■□□□□ 0.392e-7■■■□□ 15.2
PCF11-206ENST00000533018 BRAFP15056 766 aa17.51■□□□□ 0.39
PCF11-206ENST00000533018 SPAM1P38567 509 aa17.51■□□□□ 0.39
PCF11-206ENST00000533018 HALP42357 657 aa17.51■□□□□ 0.39
PCF11-206ENST00000533018 CHRNA4P43681 627 aa17.51■□□□□ 0.39
PCF11-206ENST00000533018 LEPRP48357 1165 aaKnown RBP17.51■□□□□ 0.39
PCF11-206ENST00000533018 POLE2P56282 527 aa17.51■□□□□ 0.39
PCF11-206ENST00000533018 ADCY2Q08462 1091 aa17.51■□□□□ 0.39
PCF11-206ENST00000533018 TCEAL1Q15170 157 aa17.51■□□□□ 0.39
PCF11-206ENST00000533018 ZDHHC20Q5W0Z9 365 aa17.51■□□□□ 0.39
PCF11-206ENST00000533018 KDELC1Q6UW63 502 aa17.51■□□□□ 0.39
PCF11-206ENST00000533018 ABRAXAS1Q6UWZ7 409 aa17.51■□□□□ 0.39
PCF11-206ENST00000533018 RCOR2Q8IZ40 523 aa17.51■□□□□ 0.39
PCF11-206ENST00000533018 ZNF567Q8N184 647 aa17.51■□□□□ 0.39
PCF11-206ENST00000533018 ELMO2Q96JJ3 720 aa17.51■□□□□ 0.39
PCF11-206ENST00000533018 SLC45A3Q96JT2 553 aa17.51■□□□□ 0.39
PCF11-206ENST00000533018 CATSPER2Q96P56 530 aa17.51■□□□□ 0.39
PCF11-206ENST00000533018 FSD1LQ9BXM9 530 aa17.51■□□□□ 0.39
PCF11-206ENST00000533018 ULBP3Q9BZM4 244 aa17.51■□□□□ 0.39
PCF11-206ENST00000533018 ZCCHC2Q9C0B9 1178 aaKnown RBP17.51■□□□□ 0.39
PCF11-206ENST00000533018 SLC40A1Q9NP59 571 aa17.51■□□□□ 0.39
PCF11-206ENST00000533018 IL26Q9NPH9 171 aa17.51■□□□□ 0.39
PCF11-206ENST00000533018 OGFRQ9NZT2 677 aa17.51■□□□□ 0.39
PCF11-206ENST00000533018 HACD3Q9P035 362 aa17.51■□□□□ 0.39
PCF11-206ENST00000533018 RSPH14Q9UHP6 348 aa17.51■□□□□ 0.39
PCF11-206ENST00000533018 TMPRSS11EQ9UL52 423 aa17.51■□□□□ 0.39
PCF11-206ENST00000533018 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.51■□□□□ 0.39
PCF11-206ENST00000533018 PKP3Q9Y446 797 aa17.51■□□□□ 0.39
PCF11-206ENST00000533018 UGT1A9O60656 530 aa17.5■□□□□ 0.39
PCF11-206ENST00000533018 C9P02748 559 aa17.5■□□□□ 0.39
PCF11-206ENST00000533018 ANKRD34CP0C6C1 535 aa17.5■□□□□ 0.39
PCF11-206ENST00000533018 UGT1A6P19224 532 aa17.5■□□□□ 0.39
PCF11-206ENST00000533018 UGT1A1P22309 533 aa17.5■□□□□ 0.39
PCF11-206ENST00000533018 UGT1A4P22310 534 aa17.5■□□□□ 0.39
PCF11-206ENST00000533018 ABHD18Q0P651 414 aa17.5■□□□□ 0.39
PCF11-206ENST00000533018 GPR18Q14330 331 aa17.5■□□□□ 0.39
PCF11-206ENST00000533018 SLC1A5Q15758 541 aa17.5■□□□□ 0.39
PCF11-206ENST00000533018 CHRNA6Q15825 494 aa17.5■□□□□ 0.39
PCF11-206ENST00000533018 TAZQ16635 292 aa17.5■□□□□ 0.39
PCF11-206ENST00000533018 CCDC181Q5TID7 509 aa17.5■□□□□ 0.39
PCF11-206ENST00000533018 IRGCQ6NXR0 463 aa17.5■□□□□ 0.39
PCF11-206ENST00000533018 FAM92BQ6ZTR7 304 aa17.5■□□□□ 0.39
PCF11-206ENST00000533018 RASGRP3Q8IV61 690 aa17.5■□□□□ 0.39
PCF11-206ENST00000533018 ZDHHC12Q96GR4 267 aa17.5■□□□□ 0.39
PCF11-206ENST00000533018 MRGPRX2Q96LB1 330 aa17.5■□□□□ 0.39
PCF11-206ENST00000533018 OR6C1Q96RD1 312 aa17.5■□□□□ 0.39
PCF11-206ENST00000533018 FCRL5Q96RD9 977 aa17.5■□□□□ 0.39
PCF11-206ENST00000533018 VAT1Q99536 393 aa17.5■□□□□ 0.39
PCF11-206ENST00000533018 HEMGNQ9BXL5 484 aa17.5■□□□□ 0.39
PCF11-206ENST00000533018 SPRY4Q9C004 299 aa17.5■□□□□ 0.39
PCF11-206ENST00000533018 ADNPQ9H2P0 1102 aa17.5■□□□□ 0.39
PCF11-206ENST00000533018 UGT1A7Q9HAW7 530 aa17.5■□□□□ 0.39
PCF11-206ENST00000533018 UGT1A10Q9HAW8 530 aa17.5■□□□□ 0.39
PCF11-206ENST00000533018 UGT1A8Q9HAW9 530 aa17.5■□□□□ 0.39
PCF11-206ENST00000533018 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.5■□□□□ 0.39
PCF11-206ENST00000533018 TFR2Q9UP52 801 aa17.5■□□□□ 0.39
PCF11-206ENST00000533018 TMEM184BQ9Y519 407 aaPredicted RBP17.5■□□□□ 0.39
PCF11-206ENST00000533018 hCG_1818297A0A087WSY0 165 aa17.49■□□□□ 0.39
PCF11-206ENST00000533018 GLYATL1P3A0A0U1RQE8 302 aa17.49■□□□□ 0.39
PCF11-206ENST00000533018 H7C0C1 242 aa17.49■□□□□ 0.39
PCF11-206ENST00000533018 SUV39H1O43463 412 aa17.49■□□□□ 0.39
PCF11-206ENST00000533018 KIF1CO43896 1103 aaKnown RBP17.49■□□□□ 0.39
PCF11-206ENST00000533018 EPOP01588 193 aa17.49■□□□□ 0.39
PCF11-206ENST00000533018 ATP5OP48047 213 aa17.49■□□□□ 0.39
PCF11-206ENST00000533018 SH3BP2P78314 561 aa17.49■□□□□ 0.39
PCF11-206ENST00000533018 TBX2Q13207 712 aaPredicted RBP17.49■□□□□ 0.39
PCF11-206ENST00000533018 KCNAB2Q13303 367 aa17.49■□□□□ 0.39
PCF11-206ENST00000533018 SPA17Q15506 151 aa17.49■□□□□ 0.39
PCF11-206ENST00000533018 LDLRAP1Q5SW96 308 aa17.49■□□□□ 0.39
PCF11-206ENST00000533018 AGAP9Q5VTM2 703 aa17.49■□□□□ 0.39
PCF11-206ENST00000533018 CACHD1Q5VU97 1274 aa17.49■□□□□ 0.39
PCF11-206ENST00000533018 C16orf46Q6P387 395 aa17.49■□□□□ 0.39
PCF11-206ENST00000533018 WASH2PQ6VEQ5 465 aa17.49■□□□□ 0.39
PCF11-206ENST00000533018 C11orf96Q7Z7L8 435 aa17.49■□□□□ 0.39
PCF11-206ENST00000533018 AMZ2Q86W34 360 aa17.49■□□□□ 0.39
PCF11-206ENST00000533018 PTRH1Q86Y79 214 aaKnown RBP17.49■□□□□ 0.39
PCF11-206ENST00000533018 RBM12BQ8IXT5 1001 aaKnown RBP17.49■□□□□ 0.39
PCF11-206ENST00000533018 KATNAL2Q8IYT4 538 aa17.49■□□□□ 0.39
PCF11-206ENST00000533018 TTC30BQ8N4P2 665 aa17.49■□□□□ 0.39
PCF11-206ENST00000533018 ESX1Q8N693 406 aa17.49■□□□□ 0.39
PCF11-206ENST00000533018 RSC1A1Q92681 617 aa17.49■□□□□ 0.39
PCF11-206ENST00000533018 OXNAD1Q96HP4 312 aaPredicted RBP17.49■□□□□ 0.39
PCF11-206ENST00000533018 RBM41Q96IZ5 413 aaKnown RBP17.49■□□□□ 0.39
PCF11-206ENST00000533018 TRIM5Q9C035 493 aa17.49■□□□□ 0.39
PCF11-206ENST00000533018 ZNF768Q9H5H4 540 aaKnown RBP17.49■□□□□ 0.39
PCF11-206ENST00000533018 WASH6PQ9NQA3 447 aa17.49■□□□□ 0.39
PCF11-206ENST00000533018 SIDT1Q9NXL6 827 aaKnown RBP17.49■□□□□ 0.39
PCF11-206ENST00000533018 IL17CQ9P0M4 197 aa17.49■□□□□ 0.39
PCF11-206ENST00000533018 IL17BQ9UHF5 180 aa17.49■□□□□ 0.39
PCF11-206ENST00000533018 PSMD13Q9UNM6 376 aa17.49■□□□□ 0.39
PCF11-206ENST00000533018 WDR37Q9Y2I8 494 aa17.49■□□□□ 0.39
PCF11-206ENST00000533018 MACROD2A1Z1Q3 448 aa17.48■□□□□ 0.39
PCF11-206ENST00000533018 OR2AG2A6NM03 316 aa17.48■□□□□ 0.39
PCF11-206ENST00000533018 HACD1B0YJ81 288 aa17.48■□□□□ 0.39
PCF11-206ENST00000533018 TOX3O15405 576 aaPredicted RBP17.48■□□□□ 0.39
PCF11-206ENST00000533018 GPR39O43194 453 aa17.48■□□□□ 0.39
PCF11-206ENST00000533018 POP7O75817 140 aaKnown RBP17.48■□□□□ 0.39
PCF11-206ENST00000533018 HLA-DPA1P20036 260 aa17.48■□□□□ 0.39
PCF11-206ENST00000533018 TCN2P20062 427 aa17.48■□□□□ 0.39
PCF11-206ENST00000533018 PBLDP30039 288 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms