RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 CTBSQ01459 385 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 FRG1Q14331 258 aaKnown RBP11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 SEMA3AQ14563 771 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 SMAD1Q15797 465 aaKnown RBP11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 INSCQ1MX18 579 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 STEAP4Q687X5 459 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 LVRNQ6Q4G3 990 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 PACS1Q6VY07 963 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 AMZ2Q86W34 360 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 CILP2Q8IUL8 1156 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 RELL1Q8IUW5 271 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 ZNF547Q8IVP9 402 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 UNC5BQ8IZJ1 945 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 CLDN19Q8N6F1 224 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 PNPLA1Q8N8W4 532 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 EIF1ADQ8N9N8 165 aaKnown RBP11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 GPBAR1Q8TDU6 330 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 RHBDD1Q8TEB9 315 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 SETD7Q8WTS6 366 aaKnown RBP11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 CERS2Q96G23 380 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 C9orf72Q96LT7 481 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 WDR83Q9BRX9 315 aaKnown RBP11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 FAM167BQ9BTA0 163 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 DUSP23Q9BVJ7 150 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 BOCQ9BWV1 1114 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 CAAP1Q9H8G2 361 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 VPS37BQ9H9H4 285 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 IARS2Q9NSE4 1012 aaKnown RBP11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 IL1RAPL1Q9NZN1 696 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 PCYT1BQ9Y5K3 369 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 DOCK9Q9BZ29 2069 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 LAMA1P25391 3075 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 KLHL33A6NCF5 533 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 PRMT5O14744 637 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 FFAR2O15552 330 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 FLRT2O43155 660 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 OR1I1O60431 355 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 ERLIN1O75477 346 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 SPAG6O75602 509 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 ACP5P13686 325 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 SDHBP21912 280 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 ECHS1P30084 290 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 SSTR1P30872 391 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 ACTR1BP42025 376 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 GRK6P43250 576 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 ACTR1AP61163 376 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 MGAT5Q09328 741 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 CTBP1Q13363 440 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 SLMAPQ14BN4 828 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 TCEA2Q15560 299 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 TYSND1Q2T9J0 566 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 BCL7AQ4VC05 210 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 TEDDM1Q5T9Z0 273 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 ZNF470Q6ECI4 717 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 TRMT10BQ6PF06 316 aaKnown RBP11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 CAPN12Q6ZSI9 719 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 CYS1Q717R9 158 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 KANSL1Q7Z3B3 1105 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 LRRC6Q86X45 466 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 EID2Q8N6I1 236 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 BEND7Q8N7W2 519 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 FAM46DQ8NEK8 389 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 CCL4L1Q8NHW4 92 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 CDKL2Q92772 493 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 LINC00615Q96LM1 132 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 TIMM29Q9BSF4 260 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 CCM2Q9BSQ5 444 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 PLAC1Q9HBJ0 212 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 KLC4Q9NSK0 619 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 INTS10Q9NVR2 710 aaKnown RBP11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 NLGN3Q9NZ94 848 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 MOCS1Q9NZB8 636 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 FBXO5Q9UKT4 447 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 PLEKHM1Q9Y4G2 1056 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 BPTFQ12830 3046 aa11.07□□□□□ -0.64
TRAPPC4-211ENST00000533012 WDR87Q6ZQQ6 2873 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 C17orf113A0A1B0GUU1 675 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 UBA6A0AVT1 1052 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 MGAT4DA6NG13 374 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 ATP8B1O43520 1251 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 SGTAO43765 313 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 SH3BP5O60239 455 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 S1PR4O95977 384 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 FTH1P02794 183 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 CELA2BP08218 269 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 GSTM1P09488 218 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 IDSP22304 550 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 AK4P27144 223 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 FMO4P31512 558 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 PHBP35232 272 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 PRLHRP49683 370 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 CLCNKAP51800 687 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 ADARP55265 1226 aaKnown RBP11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 GSTM4Q03013 218 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 KYNUQ16719 465 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 DEFB133Q30KQ1 61 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 PTRHD1Q6GMV3 140 aaKnown RBP11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 ZNF449Q6P9G9 518 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 SLC30A9Q6PML9 568 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 CCNI2Q6ZMN8 369 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms