RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 RPA1P27694 616 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 IER3P46695 156 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 KCNJ1P48048 391 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 HTR6P50406 440 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 GBX2P52951 348 aaPredicted RBP4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 ADORA2A-AS1P86434 159 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 GFPT1Q06210 699 aaPredicted RBP4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 RIPK1Q13546 671 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 GALNT3Q14435 633 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 FAM98BQ52LJ0 330 aaKnown RBP4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 SGO1Q5FBB7 561 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 TEX38Q6PEX7 206 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 PAPD4Q6PIY7 484 aaKnown RBP4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 ENPP7Q6UWV6 458 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 RANBP10Q6VN20 620 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 PQLC2Q6ZP29 291 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 TMEM182Q6ZP80 229 aaPredicted RBP4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 RNF207Q6ZRF8 634 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 TPRG1Q6ZUI0 275 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 TMEM173Q86WV6 379 aaPredicted RBP4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 ZBTB2Q8N680 514 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 NXNL1Q96CM4 212 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 TUBGCP3Q96CW5 907 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 THUMPD2Q9BTF0 503 aaKnown RBP4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 GATA5Q9BWX5 397 aaPredicted RBP4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 ATG10Q9H0Y0 220 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 HIPK3Q9H422 1215 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 TFB2MQ9H5Q4 396 aaKnown RBP4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 ACTR5Q9H9F9 607 aaPredicted RBP4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 SLC28A3Q9HAS3 691 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 CD93Q9NPY3 652 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 ANKRD10Q9NXR5 420 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 DLL3Q9NYJ7 618 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 OR6C3Q9NZP0 311 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 NDRG3Q9UGV2 375 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 GMEB2Q9UKD1 530 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 ADAMTS5Q9UNA0 930 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 WNT6Q9Y6F9 365 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 A3GALT2U3KPV4 340 aa4.28□□□□□ -1.72
AC055878.1-201ENST00000531858 C2orf92A0A1B0GVN3 265 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 C1orf226A1L170 272 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 KBTBD13C9JR72 458 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 F8WDY8 70 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 RFXAPO00287 272 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 VWA5AO00534 786 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 MPPED1O15442 326 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 ST8SIA3O43173 380 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 TMCC1O94876 653 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 SCAF4O95104 1147 aaKnown RBP4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 LUC7L3O95232 432 aaKnown RBP4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 KCNK5O95279 499 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 TSPAN15O95858 294 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 TGFAP01135 160 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 ELFN1P0C7U0 828 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 TSPY4P0CV99 314 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 TSPY10P0CW01 314 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 CCNCP24863 283 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 DDX6P26196 483 aaKnown RBP eCLIP4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 CCND3P30281 292 aaPredicted RBP4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 CORO1AP31146 461 aaKnown RBP4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 SLC6A6P31641 620 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 CHRNA3P32297 505 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 SOX6P35712 828 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 SCNN1GP51170 649 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 COPB1P53618 953 aaKnown RBP4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 CACNA2D1P54289 1103 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 CDK3Q00526 305 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 SORDQ00796 357 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 ARHGAP1Q07960 439 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 SPOCK1Q08629 439 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 ELP6Q0PNE2 266 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 RESTQ13127 1097 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 MTA1Q13330 715 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 ITGADQ13349 1161 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 TNK1Q13470 666 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 LARS2Q15031 903 aaKnown RBP4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 BEAN1Q3B7T3 259 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 RABL6Q3YEC7 729 aaPredicted RBP4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 KLHL26Q53HC5 615 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 RNASE12Q5GAN4 147 aaKnown RBP4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 HERC4Q5GLZ8 1057 aaPredicted RBP4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 ARL13AQ5H913 290 aaPredicted RBP4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 AARS2Q5JTZ9 985 aaKnown RBP4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 KCNT1Q5JUK3 1230 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 KIAA0895LQ68EN5 471 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 PRR27Q6MZM9 219 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 FBXO42Q6P3S6 717 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 ZCCHC12Q6PEW1 402 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 BRAT1Q6PJG6 821 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 DHRS13Q6UX07 377 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 SLC36A4Q6YBV0 504 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 DCDC5Q6ZRR9 648 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 IRF2BP2Q7Z5L9 587 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 C1QL4Q86Z23 238 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 CCDC83Q8IWF9 413 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 ZNF595Q8IYB9 648 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 FBXO39Q8N4B4 442 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 TMEM217Q8N7C4 229 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 ZNF611Q8N823 705 aa4.27□□□□□ -1.73
AC055878.1-201ENST00000531858 AMER3Q8N944 861 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms