RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 HERPUD2Q9BSE4 406 aa17.81■□□□□ 0.44
SCN4B-205ENST00000531550 TBC1D10AQ9BXI6 508 aa17.81■□□□□ 0.44
SCN4B-205ENST00000531550 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.81■□□□□ 0.44
SCN4B-205ENST00000531550 OSBPL8Q9BZF1 889 aa17.81■□□□□ 0.44
SCN4B-205ENST00000531550 EPB41L1Q9H4G0 881 aa17.81■□□□□ 0.44
SCN4B-205ENST00000531550 VPS4AQ9UN37 437 aa17.81■□□□□ 0.44
SCN4B-205ENST00000531550 KCNK6Q9Y257 313 aa17.81■□□□□ 0.44
SCN4B-205ENST00000531550 hCG_1818297A0A087WSY0 165 aa17.8■□□□□ 0.44
SCN4B-205ENST00000531550 MAFKO60675 156 aa17.8■□□□□ 0.44
SCN4B-205ENST00000531550 PDGFAP04085 211 aa17.8■□□□□ 0.44
SCN4B-205ENST00000531550 PDHA1P08559 390 aa17.8■□□□□ 0.44
SCN4B-205ENST00000531550 CD48P09326 243 aa17.8■□□□□ 0.44
SCN4B-205ENST00000531550 SLC2A4P14672 509 aa17.8■□□□□ 0.44
SCN4B-205ENST00000531550 ZNF30P17039 623 aa17.8■□□□□ 0.44
SCN4B-205ENST00000531550 ARL4AP40617 200 aa17.8■□□□□ 0.44
SCN4B-205ENST00000531550 PAFAH1B1P43034 410 aa17.8■□□□□ 0.44
SCN4B-205ENST00000531550 GFERP55789 205 aa17.8■□□□□ 0.44
SCN4B-205ENST00000531550 FOXM1Q08050 763 aa17.8■□□□□ 0.44
SCN4B-205ENST00000531550 AADACL2Q6P093 401 aa17.8■□□□□ 0.44
SCN4B-205ENST00000531550 TMEM135Q86UB9 458 aa17.8■□□□□ 0.44
SCN4B-205ENST00000531550 SLC13A5Q86YT5 568 aaPredicted RBP17.8■□□□□ 0.44
SCN4B-205ENST00000531550 PLXDC1Q8IUK5 500 aa17.8■□□□□ 0.44
SCN4B-205ENST00000531550 CCDC50Q8IVM0 306 aa17.8■□□□□ 0.44
SCN4B-205ENST00000531550 GALNT6Q8NCL4 622 aa17.8■□□□□ 0.44
SCN4B-205ENST00000531550 MAIP1Q8WWC4 291 aa17.8■□□□□ 0.44
SCN4B-205ENST00000531550 RIOK2Q9BVS4 552 aaKnown RBP17.8■□□□□ 0.44
SCN4B-205ENST00000531550 VPS18Q9P253 973 aa17.8■□□□□ 0.44
SCN4B-205ENST00000531550 TLK1Q9UKI8 766 aa17.8■□□□□ 0.44
SCN4B-205ENST00000531550 OAS3Q9Y6K5 1087 aaKnown RBP17.8■□□□□ 0.44
SCN4B-205ENST00000531550 ICE1Q9Y2F5 2266 aa17.79■□□□□ 0.44
SCN4B-205ENST00000531550 SPTAN1Q13813 2472 aaKnown RBP17.79■□□□□ 0.44
SCN4B-205ENST00000531550 KIR2DS5A0A0G2JLQ3 304 aa17.79■□□□□ 0.44
SCN4B-205ENST00000531550 A0A0G2JNG1 304 aa17.79■□□□□ 0.44
SCN4B-205ENST00000531550 CDC14CA4D256 554 aa17.79■□□□□ 0.44
SCN4B-205ENST00000531550 LILRA5A6NI73 299 aa17.79■□□□□ 0.44
SCN4B-205ENST00000531550 H3BRJ5 948 aa17.79■□□□□ 0.44
SCN4B-205ENST00000531550 KIR2DS3K7RE56 304 aa17.79■□□□□ 0.44
SCN4B-205ENST00000531550 PGRMC1O00264 195 aaKnown RBP17.79■□□□□ 0.44
SCN4B-205ENST00000531550 FZD6O60353 706 aa17.79■□□□□ 0.44
SCN4B-205ENST00000531550 KATNA1O75449 491 aa17.79■□□□□ 0.44
SCN4B-205ENST00000531550 C9P02748 559 aa17.79■□□□□ 0.44
SCN4B-205ENST00000531550 ACP5P13686 325 aa17.79■□□□□ 0.44
SCN4B-205ENST00000531550 F3P13726 295 aa17.79■□□□□ 0.44
SCN4B-205ENST00000531550 MMP13P45452 471 aa17.79■□□□□ 0.44
SCN4B-205ENST00000531550 STC1P52823 247 aa17.79■□□□□ 0.44
SCN4B-205ENST00000531550 CKAP4Q07065 602 aaKnown RBP17.79■□□□□ 0.44
SCN4B-205ENST00000531550 KIR2DS5Q14953 304 aa17.79■□□□□ 0.44
SCN4B-205ENST00000531550 CCDC181Q5TID7 509 aa17.79■□□□□ 0.44
SCN4B-205ENST00000531550 ZNF572Q7Z3I7 529 aaPredicted RBP17.79■□□□□ 0.44
SCN4B-205ENST00000531550 NDUFAF2Q8N183 169 aa17.79■□□□□ 0.44
SCN4B-205ENST00000531550 ATPAF2Q8N5M1 289 aa17.79■□□□□ 0.44
SCN4B-205ENST00000531550 EFCAB3Q8N7B9 438 aa17.79■□□□□ 0.44
SCN4B-205ENST00000531550 GALNT11Q8NCW6 608 aa17.79■□□□□ 0.44
SCN4B-205ENST00000531550 SSC4DQ8WTU2 575 aa17.79■□□□□ 0.44
SCN4B-205ENST00000531550 STAMBPL1Q96FJ0 436 aa17.79■□□□□ 0.44
SCN4B-205ENST00000531550 MS4A14Q96JA4 679 aa17.79■□□□□ 0.44
SCN4B-205ENST00000531550 CAPZA3Q96KX2 299 aa17.79■□□□□ 0.44
SCN4B-205ENST00000531550 C9orf72Q96LT7 481 aa17.79■□□□□ 0.44
SCN4B-205ENST00000531550 RNF157Q96PX1 679 aa17.79■□□□□ 0.44
SCN4B-205ENST00000531550 ETNK2Q9NVF9 386 aa17.79■□□□□ 0.44
SCN4B-205ENST00000531550 CPNE7Q9UBL6 633 aa17.79■□□□□ 0.44
SCN4B-205ENST00000531550 A0A0J9YYE9 177 aa17.78■□□□□ 0.44
SCN4B-205ENST00000531550 SNX2O60749 519 aa17.78■□□□□ 0.44
SCN4B-205ENST00000531550 TJP3O95049 919 aa17.78■□□□□ 0.44
SCN4B-205ENST00000531550 TRBC1P01850 177 aa17.78■□□□□ 0.44
SCN4B-205ENST00000531550 FGGP02679 453 aa17.78■□□□□ 0.44
SCN4B-205ENST00000531550 AMPD1P23109 780 aa17.78■□□□□ 0.44
SCN4B-205ENST00000531550 SH3BP2P78314 561 aa17.78■□□□□ 0.44
SCN4B-205ENST00000531550 KLF1Q13351 362 aaPredicted RBP17.78■□□□□ 0.44
SCN4B-205ENST00000531550 TFDP2Q14188 446 aa17.78■□□□□ 0.44
SCN4B-205ENST00000531550 ANKRD20A8PQ5CZ79 823 aa17.78■□□□□ 0.44
SCN4B-205ENST00000531550 MARC1Q5VT66 337 aa17.78■□□□□ 0.44
SCN4B-205ENST00000531550 TMCO3Q6UWJ1 677 aa17.78■□□□□ 0.44
SCN4B-205ENST00000531550 LYSMD3Q7Z3D4 306 aa17.78■□□□□ 0.44
SCN4B-205ENST00000531550 NSMCE1Q8WV22 266 aa17.78■□□□□ 0.44
SCN4B-205ENST00000531550 CSPG4P5Q96PW8 444 aa17.78■□□□□ 0.44
SCN4B-205ENST00000531550 MAK16Q9BXY0 300 aaKnown RBP17.78■□□□□ 0.44
SCN4B-205ENST00000531550 OGFRQ9NZT2 677 aa17.78■□□□□ 0.44
SCN4B-205ENST00000531550 KCND3Q9UK17 655 aa17.78■□□□□ 0.44
SCN4B-205ENST00000531550 CNOT6Q9ULM6 557 aaKnown RBP17.78■□□□□ 0.44
SCN4B-205ENST00000531550 UNC79Q9P2D8 2635 aa17.78■□□□□ 0.44
SCN4B-205ENST00000531550 TTLL8A6PVC2 850 aa17.77■□□□□ 0.44
SCN4B-205ENST00000531550 KIAA0754O94854 1291 aa17.77■□□□□ 0.44
SCN4B-205ENST00000531550 UBE2IP63279 158 aaKnown RBP17.77■□□□□ 0.44
SCN4B-205ENST00000531550 MMRN1Q13201 1228 aa17.77■□□□□ 0.44
SCN4B-205ENST00000531550 LONRF2Q1L5Z9 754 aa17.77■□□□□ 0.44
SCN4B-205ENST00000531550 BBS12Q6ZW61 710 aa17.77■□□□□ 0.44
SCN4B-205ENST00000531550 RASGRP3Q8IV61 690 aa17.77■□□□□ 0.44
SCN4B-205ENST00000531550 CEP112Q8N8E3 955 aa17.77■□□□□ 0.44
SCN4B-205ENST00000531550 AVL9Q8NBF6 648 aa17.77■□□□□ 0.44
SCN4B-205ENST00000531550 CPT1CQ8TCG5 803 aa17.77■□□□□ 0.44
SCN4B-205ENST00000531550 OR6C1Q96RD1 312 aa17.77■□□□□ 0.44
SCN4B-205ENST00000531550 TWSG1Q9GZX9 223 aa17.77■□□□□ 0.44
SCN4B-205ENST00000531550 RMI1Q9H9A7 625 aa17.77■□□□□ 0.44
SCN4B-205ENST00000531550 NT5MQ9NPB1 228 aa17.77■□□□□ 0.44
SCN4B-205ENST00000531550 PCDHGA6Q9Y5G7 932 aa17.77■□□□□ 0.44
SCN4B-205ENST00000531550 MYO9AB2RTY4 2548 aa17.76■□□□□ 0.43
SCN4B-205ENST00000531550 OR5K4A6NMS3 321 aa17.76■□□□□ 0.43
SCN4B-205ENST00000531550 CREG1O75629 220 aa17.76■□□□□ 0.43
SCN4B-205ENST00000531550 DNAJB5O75953 348 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms