RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 SGF29Q96ES7 293 aa11.69□□□□□ -0.54
LTBP3-219ENST00000530990 DCUN1D1Q96GG9 259 aa11.69□□□□□ -0.54
LTBP3-219ENST00000530990 TRIM56Q9BRZ2 755 aaKnown RBP11.69□□□□□ -0.54
LTBP3-219ENST00000530990 KIFC1Q9BW19 673 aa11.69□□□□□ -0.54
LTBP3-219ENST00000530990 SYNDIG1Q9H7V2 258 aa11.69□□□□□ -0.54
LTBP3-219ENST00000530990 MRM3Q9HC36 420 aaKnown RBP11.69□□□□□ -0.54
LTBP3-219ENST00000530990 XAB2Q9HCS7 855 aaKnown RBP11.69□□□□□ -0.54
LTBP3-219ENST00000530990 PRDM8Q9NQV8 689 aa11.69□□□□□ -0.54
LTBP3-219ENST00000530990 ZDHHC3Q9NYG2 299 aa11.69□□□□□ -0.54
LTBP3-219ENST00000530990 SOX13Q9UN79 622 aa11.69□□□□□ -0.54
LTBP3-219ENST00000530990 TRBV23OR9-2A0A075B6M9 112 aa11.68□□□□□ -0.54
LTBP3-219ENST00000530990 PDZK1P1A8MUH7 402 aa11.68□□□□□ -0.54
LTBP3-219ENST00000530990 CFAP99D6REC4 459 aa11.68□□□□□ -0.54
LTBP3-219ENST00000530990 NUDT21O43809 227 aaKnown RBP11.68□□□□□ -0.54
LTBP3-219ENST00000530990 RALBP11234 206 aa11.68□□□□□ -0.54
LTBP3-219ENST00000530990 MLNP12872 115 aa11.68□□□□□ -0.54
LTBP3-219ENST00000530990 F3P13726 295 aa11.68□□□□□ -0.54
LTBP3-219ENST00000530990 ATP1B2P14415 290 aaPredicted RBP11.68□□□□□ -0.54
LTBP3-219ENST00000530990 IVDP26440 423 aa11.68□□□□□ -0.54
LTBP3-219ENST00000530990 MAGEA3P43357 314 aa11.68□□□□□ -0.54
LTBP3-219ENST00000530990 PRLHRP49683 370 aa11.68□□□□□ -0.54
LTBP3-219ENST00000530990 DRG2P55039 364 aaKnown RBP11.68□□□□□ -0.54
LTBP3-219ENST00000530990 E2F1Q01094 437 aa11.68□□□□□ -0.54
LTBP3-219ENST00000530990 DHX34Q14147 1143 aaKnown RBP11.68□□□□□ -0.54
LTBP3-219ENST00000530990 SEMA3AQ14563 771 aa11.68□□□□□ -0.54
LTBP3-219ENST00000530990 BCL7AQ4VC05 210 aa11.68□□□□□ -0.54
LTBP3-219ENST00000530990 FAM83HQ6ZRV2 1179 aaPredicted RBP11.68□□□□□ -0.54
LTBP3-219ENST00000530990 SYDE1Q6ZW31 735 aaPredicted RBP11.68□□□□□ -0.54
LTBP3-219ENST00000530990 SPRED1Q7Z699 444 aa11.68□□□□□ -0.54
LTBP3-219ENST00000530990 TMPRSS12Q86WS5 348 aa11.68□□□□□ -0.54
LTBP3-219ENST00000530990 GALNT15Q8N3T1 639 aa11.68□□□□□ -0.54
LTBP3-219ENST00000530990 SFRP1Q8N474 314 aa11.68□□□□□ -0.54
LTBP3-219ENST00000530990 SPATA4Q8NEY3 305 aa11.68□□□□□ -0.54
LTBP3-219ENST00000530990 OR6C4Q8NGE1 309 aa11.68□□□□□ -0.54
LTBP3-219ENST00000530990 OR6P1Q8NGX9 317 aa11.68□□□□□ -0.54
LTBP3-219ENST00000530990 OR4L1Q8NH43 312 aa11.68□□□□□ -0.54
LTBP3-219ENST00000530990 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.68□□□□□ -0.54
LTBP3-219ENST00000530990 ZNF514Q96K75 400 aaPredicted RBP11.68□□□□□ -0.54
LTBP3-219ENST00000530990 ABCG4Q9H172 646 aa11.68□□□□□ -0.54
LTBP3-219ENST00000530990 SCHIP1Q9P0W5 487 aaPredicted RBP11.68□□□□□ -0.54
LTBP3-219ENST00000530990 LRIT1Q9P2V4 623 aa11.68□□□□□ -0.54
LTBP3-219ENST00000530990 FAM8A1Q9UBU6 413 aa11.68□□□□□ -0.54
LTBP3-219ENST00000530990 NEUROG3Q9Y4Z2 214 aa11.68□□□□□ -0.54
LTBP3-219ENST00000530990 A0A1W2PQM1 296 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 RHPN2P1A8MT19 583 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 PPM1DO15297 605 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 BANF1O75531 89 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 POP7O75817 140 aaKnown RBP11.67□□□□□ -0.54
LTBP3-219ENST00000530990 RPLP0P05388 317 aaKnown RBP11.67□□□□□ -0.54
LTBP3-219ENST00000530990 BRAFP15056 766 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 VCLP18206 1134 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 ARNTP27540 789 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 RPL10P27635 214 aaKnown RBP11.67□□□□□ -0.54
LTBP3-219ENST00000530990 FASLGP48023 281 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 MRPS25P82663 173 aaKnown RBP11.67□□□□□ -0.54
LTBP3-219ENST00000530990 DMPKQ09013 629 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 NFE2L1Q14494 772 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 ITIH4Q14624 930 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 FASTKD1Q53R41 847 aaKnown RBP11.67□□□□□ -0.54
LTBP3-219ENST00000530990 CDCP2Q5VXM1 449 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 CASC4Q6P4E1 433 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 IYDQ6PHW0 289 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 XKR5Q6UX68 686 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 ZNF438Q7Z4V0 828 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 PCGF5Q86SE9 256 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 HOOK3Q86VS8 718 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 AMZ2Q86W34 360 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 ZNF761Q86XN6 746 aaPredicted RBP11.67□□□□□ -0.54
LTBP3-219ENST00000530990 CCNJLQ8IV13 435 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 CLDN19Q8N6F1 224 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 Q8N9G6 341 aaPredicted RBP11.67□□□□□ -0.54
LTBP3-219ENST00000530990 HEXDCQ8WVB3 486 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 ZNF592Q92610 1267 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 ZNF669Q96BR6 464 aaPredicted RBP11.67□□□□□ -0.54
LTBP3-219ENST00000530990 SGSM3Q96HU1 749 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 TRIM31Q9BZY9 425 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 CATSPERZQ9NTU4 200 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 SAMD15Q9P1V8 674 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 MARCH4Q9P2E8 410 aaPredicted RBP11.67□□□□□ -0.54
LTBP3-219ENST00000530990 MSRB2Q9Y3D2 182 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 PRSS21Q9Y6M0 314 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 UNC13CQ8NB66 2214 aa11.67□□□□□ -0.54
LTBP3-219ENST00000530990 KIR2DS5A0A0G2JLQ3 304 aa11.66□□□□□ -0.54
LTBP3-219ENST00000530990 A0A0G2JNG1 304 aa11.66□□□□□ -0.54
LTBP3-219ENST00000530990 FAM221BA6H8Z2 402 aa11.66□□□□□ -0.54
LTBP3-219ENST00000530990 MGAT4DA6NG13 374 aa11.66□□□□□ -0.54
LTBP3-219ENST00000530990 SDR42E2A6NKP2 422 aa11.66□□□□□ -0.54
LTBP3-219ENST00000530990 EFCAB8A8MWE9 144 aa11.66□□□□□ -0.54
LTBP3-219ENST00000530990 D6RAR5 112 aa11.66□□□□□ -0.54
LTBP3-219ENST00000530990 KIR2DS3K7RE56 304 aa11.66□□□□□ -0.54
LTBP3-219ENST00000530990 NTN3O00634 580 aaPredicted RBP11.66□□□□□ -0.54
LTBP3-219ENST00000530990 RAD51CO43502 376 aa11.66□□□□□ -0.54
LTBP3-219ENST00000530990 OR1I1O60431 355 aa11.66□□□□□ -0.54
LTBP3-219ENST00000530990 URI1O94763 535 aaPredicted RBP11.66□□□□□ -0.54
LTBP3-219ENST00000530990 SEC31AO94979 1220 aaKnown RBP11.66□□□□□ -0.54
LTBP3-219ENST00000530990 VAPBO95292 243 aa11.66□□□□□ -0.54
LTBP3-219ENST00000530990 MT-CO3P00414 261 aa11.66□□□□□ -0.54
LTBP3-219ENST00000530990 SLC2A4P14672 509 aa11.66□□□□□ -0.54
LTBP3-219ENST00000530990 PNLIPP16233 465 aa11.66□□□□□ -0.54
LTBP3-219ENST00000530990 IDSP22304 550 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms