RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 PNLIPP16233 465 aa18.41■□□□□ 0.54
GMDS-208ENST00000530927 MPSTP25325 297 aa18.41■□□□□ 0.54
GMDS-208ENST00000530927 CD1CP29017 333 aa18.41■□□□□ 0.54
GMDS-208ENST00000530927 CSF2RBP32927 897 aa18.41■□□□□ 0.54
GMDS-208ENST00000530927 HADHAP40939 763 aa18.41■□□□□ 0.54
GMDS-208ENST00000530927 CFHR1Q03591 330 aa18.41■□□□□ 0.54
GMDS-208ENST00000530927 NFE2L1Q14494 772 aa18.41■□□□□ 0.54
GMDS-208ENST00000530927 CYP1B1Q16678 543 aa18.41■□□□□ 0.54
GMDS-208ENST00000530927 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.41■□□□□ 0.54
GMDS-208ENST00000530927 ANKRD22Q5VYY1 191 aa18.41■□□□□ 0.54
GMDS-208ENST00000530927 SNX20Q7Z614 316 aa18.41■□□□□ 0.54
GMDS-208ENST00000530927 NXPE1Q8N323 547 aa18.41■□□□□ 0.54
GMDS-208ENST00000530927 LILRA3Q8N6C8 439 aaPredicted RBP18.41■□□□□ 0.54
GMDS-208ENST00000530927 CAPZA3Q96KX2 299 aa18.41■□□□□ 0.54
GMDS-208ENST00000530927 SEMA6CQ9H3T2 930 aa18.41■□□□□ 0.54
GMDS-208ENST00000530927 TMEM9Q9P0T7 183 aa18.41■□□□□ 0.54
GMDS-208ENST00000530927 ZNF624Q9P2J8 865 aaPredicted RBP18.41■□□□□ 0.54
GMDS-208ENST00000530927 NEU2Q9Y3R4 380 aa18.41■□□□□ 0.54
GMDS-208ENST00000530927 SLC30A1Q9Y6M5 507 aa18.41■□□□□ 0.54
GMDS-208ENST00000530927 KNTC1P50748 2209 aa18.41■□□□□ 0.54
GMDS-208ENST00000530927 CCDC162PA2VCL2 907 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 PDZK1P1A8MUH7 402 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 KRT14P02533 472 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 HOXB3P14651 431 aaPredicted RBP18.4■□□□□ 0.54
GMDS-208ENST00000530927 ITGALP20701 1170 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 FASLGP48023 281 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 CLCNKAP51800 687 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 GABREP78334 506 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 HHEXQ03014 270 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 GPS1Q13098 491 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 NR1D2Q14995 579 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 CLCA4Q14CN2 919 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 RTP5Q14D33 572 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 FOXR1Q6PIV2 292 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 CCDC137Q6PK04 289 aaKnown RBP18.4■□□□□ 0.54
GMDS-208ENST00000530927 ZNF574Q6ZN55 896 aaPredicted RBP18.4■□□□□ 0.54
GMDS-208ENST00000530927 TAS2R42Q7RTR8 314 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 SERPINA9Q86WD7 417 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 PROSER1Q86XN7 944 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 ACTRT1Q8TDG2 376 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 NXPE2Q96DL1 559 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 NRSN2Q9GZP1 204 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 EPB41L5Q9HCM4 733 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 HOMER3Q9NSC5 361 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 PSMD13Q9UNM6 376 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 RAXQ9Y2V3 346 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 CFAP47Q6ZTR5 3102 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 KMT2BQ9UMN6 2715 aaPredicted RBP18.4■□□□□ 0.54
GMDS-208ENST00000530927 IGHV1OR21-1A0A087WYE8 117 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 TRBV5-4A0A0C4DH59 114 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 TMEM8BA6NDV4 472 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 SRRM3A6NNA2 597 aaPredicted RBP18.4■□□□□ 0.54
GMDS-208ENST00000530927 H7C0S8 307 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 KIF2AO00139 706 aaPredicted RBP18.4■□□□□ 0.54
GMDS-208ENST00000530927 AVILO75366 819 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 HGFP14210 728 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 DBN1Q16643 649 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 MAP9Q49MG5 647 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 TSTD2Q5T7W7 516 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 HDAC10Q969S8 669 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 C16orf45Q96MC5 204 aaPredicted RBP18.4■□□□□ 0.54
GMDS-208ENST00000530927 TBC1D10AQ9BXI6 508 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 ZCCHC2Q9C0B9 1178 aaKnown RBP18.4■□□□□ 0.54
GMDS-208ENST00000530927 EIF2B3Q9NR50 452 aaKnown RBP18.4■□□□□ 0.54
GMDS-208ENST00000530927 CHRAC1Q9NRG0 131 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 KCNK4Q9NYG8 393 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 CPNE7Q9UBL6 633 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 TCAF1Q9Y4C2 921 aa18.4■□□□□ 0.54
GMDS-208ENST00000530927 UNC13CQ8NB66 2214 aa18.39■□□□□ 0.53
GMDS-208ENST00000530927 HEATR9A2RTY3 570 aa18.39■□□□□ 0.53
GMDS-208ENST00000530927 CTAGE9A4FU28 777 aa18.39■□□□□ 0.53
GMDS-208ENST00000530927 TLX3O43711 291 aaPredicted RBP18.39■□□□□ 0.53
GMDS-208ENST00000530927 PHF2O75151 1096 aa18.39■□□□□ 0.53
GMDS-208ENST00000530927 TMEM63AO94886 807 aa18.39■□□□□ 0.53
GMDS-208ENST00000530927 PSMA3P25788 255 aa18.39■□□□□ 0.53
GMDS-208ENST00000530927 ACRV1P26436 265 aa18.39■□□□□ 0.53
GMDS-208ENST00000530927 MGAT1P26572 445 aa18.39■□□□□ 0.53
GMDS-208ENST00000530927 FOXN2P32314 431 aa18.39■□□□□ 0.53
GMDS-208ENST00000530927 SLC19A1P41440 591 aa18.39■□□□□ 0.53
GMDS-208ENST00000530927 MAPK9P45984 424 aa18.39■□□□□ 0.53
GMDS-208ENST00000530927 UBE2IP63279 158 aaKnown RBP18.39■□□□□ 0.53
GMDS-208ENST00000530927 KCNJ11Q14654 390 aa18.39■□□□□ 0.53
GMDS-208ENST00000530927 AMZ2Q86W34 360 aa18.39■□□□□ 0.53
GMDS-208ENST00000530927 CLDN19Q8N6F1 224 aa18.39■□□□□ 0.53
GMDS-208ENST00000530927 JPH3Q8WXH2 748 aaPredicted RBP18.39■□□□□ 0.53
GMDS-208ENST00000530927 ULK4Q96C45 1275 aa18.39■□□□□ 0.53
GMDS-208ENST00000530927 PRR11Q96HE9 360 aaPredicted RBP18.39■□□□□ 0.53
GMDS-208ENST00000530927 COPS8Q99627 209 aa18.39■□□□□ 0.53
GMDS-208ENST00000530927 TRIM56Q9BRZ2 755 aaKnown RBP18.39■□□□□ 0.53
GMDS-208ENST00000530927 DDX47Q9H0S4 455 aaKnown RBP18.39■□□□□ 0.53
GMDS-208ENST00000530927 SYBUQ9NX95 663 aa18.39■□□□□ 0.53
GMDS-208ENST00000530927 CFAP20Q9Y6A4 193 aaKnown RBP18.39■□□□□ 0.53
GMDS-208ENST00000530927 PRSS21Q9Y6M0 314 aa18.39■□□□□ 0.53
GMDS-208ENST00000530927 GOT2P00505 430 aaKnown RBP18.38■□□□□ 0.53
GMDS-208ENST00000530927 ADRA1DP25100 572 aa18.38■□□□□ 0.53
GMDS-208ENST00000530927 CASQ1P31415 396 aa18.38■□□□□ 0.53
GMDS-208ENST00000530927 INHBCP55103 352 aa18.38■□□□□ 0.53
GMDS-208ENST00000530927 SEMA3AQ14563 771 aa18.38■□□□□ 0.53
GMDS-208ENST00000530927 CES3Q6UWW8 571 aa18.38■□□□□ 0.53
GMDS-208ENST00000530927 SLITRK4Q8IW52 837 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms