RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 A0A1B0GU03 582 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 A8MZ25 164 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 SMIM1B2RUZ4 78 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 ANKRD66B4E2M5 251 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 SMAD9O15198 467 aaKnown RBP2.75□□□□□ -1.97
NUP98-218ENST00000530516 SLC22A2O15244 555 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 CREB3O43889 395 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 SYNCRIPO60506 623 aaKnown RBP2.75□□□□□ -1.97
NUP98-218ENST00000530516 CCNDBP1O95273 360 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 GCNT3O95395 438 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 HSPA1AP0DMV8 641 aaKnown RBP2.75□□□□□ -1.97
NUP98-218ENST00000530516 HSPA1BP0DMV9 641 aaKnown RBP2.75□□□□□ -1.97
NUP98-218ENST00000530516 RARGP13631 454 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 ANXA7P20073 488 aaKnown RBP2.75□□□□□ -1.97
NUP98-218ENST00000530516 MSH3P20585 1137 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 PSMA4P25789 261 aaKnown RBP2.75□□□□□ -1.97
NUP98-218ENST00000530516 MAPK4P31152 587 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 MMP15P51511 669 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 HSD17B4P51659 736 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 GPR143P51810 404 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 GALCP54803 685 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 GNB1P62873 340 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 EIF4A2Q14240 407 aaKnown RBP2.75□□□□□ -1.97
NUP98-218ENST00000530516 MVPQ14764 893 aaKnown RBP2.75□□□□□ -1.97
NUP98-218ENST00000530516 NAB2Q15742 525 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 SLC1A5Q15758 541 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 ZNF876PQ49A33 203 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 ZC2HC1CQ53FD0 456 aaPredicted RBP2.75□□□□□ -1.97
NUP98-218ENST00000530516 GKAP1Q5VSY0 366 aaPredicted RBP2.75□□□□□ -1.97
NUP98-218ENST00000530516 SFMBT2Q5VUG0 894 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 SNX30Q5VWJ9 437 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 FAM53AQ6NSI3 398 aaPredicted RBP2.75□□□□□ -1.97
NUP98-218ENST00000530516 TRPT1Q86TN4 253 aaKnown RBP2.75□□□□□ -1.97
NUP98-218ENST00000530516 CCDC190Q86UF4 302 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 GCSAMQ8N6F7 178 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 EMC1Q8N766 993 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 STPG4Q8N801 248 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 ABHD8Q96I13 439 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 OR2A14Q96R47 310 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 SEMA3CQ99985 751 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 ITPAQ9BY32 194 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 UPF2Q9HAU5 1272 aaKnown RBP2.75□□□□□ -1.97
NUP98-218ENST00000530516 SLC52A3Q9NQ40 469 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 RRP7BPQ9NSQ0 103 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 EHD2Q9NZN4 543 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 ORC3Q9UBD5 711 aaPredicted RBP2.75□□□□□ -1.97
NUP98-218ENST00000530516 TSPYL4Q9UJ04 414 aa2.75□□□□□ -1.97
NUP98-218ENST00000530516 TP53BP1Q12888 1972 aaPredicted RBP2.74□□□□□ -1.97
NUP98-218ENST00000530516 TEX13DA0A0J9YY54 714 aaPredicted RBP2.74□□□□□ -1.97
NUP98-218ENST00000530516 OR2M5A3KFT3 312 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 TMEM8BA6NDV4 472 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 BLOC1S5-TXNDC5H3BN57 136 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 SCAMP1O15126 338 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 CIDEAO60543 219 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 OR2C1O95371 312 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 TBX6O95947 436 aaPredicted RBP2.74□□□□□ -1.97
NUP98-218ENST00000530516 TFAP2AP05549 437 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 LIPFP07098 398 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 CD48P09326 243 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 LAMP2P13473 410 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 CDH2P19022 906 aaPredicted RBP2.74□□□□□ -1.97
NUP98-218ENST00000530516 NR2F2P24468 414 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 ALDH4A1P30038 563 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 KRT9P35527 623 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 PIK3CAP42336 1068 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 CTSCP53634 463 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 MLLT10P55197 1068 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 CD81P60033 236 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 GOLGA8DPQ0D2H9 430 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 PPIGQ13427 754 aaKnown RBP eCLIP2.74□□□□□ -1.97
NUP98-218ENST00000530516 PCGF3Q3KNV8 242 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 JADE1Q6IE81 842 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 RBMS3Q6XE24 437 aaKnown RBP2.74□□□□□ -1.97
NUP98-218ENST00000530516 C15orf39Q6ZRI6 1047 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 ZNF534Q76KX8 674 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 LONP2Q86WA8 852 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 ZNF843Q8N446 348 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 C1orf52Q8N6N3 182 aaKnown RBP2.74□□□□□ -1.97
NUP98-218ENST00000530516 ZNF473Q8WTR7 871 aaKnown RBP2.74□□□□□ -1.97
NUP98-218ENST00000530516 STAMBPL1Q96FJ0 436 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 GAD1Q99259 594 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 FSD1Q9BTV5 496 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 TMEM39BQ9GZU3 492 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 UNC45AQ9H3U1 944 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 TRMT1Q9NXH9 659 aaKnown RBP2.74□□□□□ -1.97
NUP98-218ENST00000530516 RCC2Q9P258 522 aaKnown RBP2.74□□□□□ -1.97
NUP98-218ENST00000530516 AASSQ9UDR5 926 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 DNAJB4Q9UDY4 337 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 CORO1CQ9ULV4 474 aaPredicted RBP2.74□□□□□ -1.97
NUP98-218ENST00000530516 SMAD5-AS1Q9Y6J3 95 aa2.74□□□□□ -1.97
NUP98-218ENST00000530516 TDRD9Q8NDG6 1382 aaKnown RBP2.74□□□□□ -1.97
NUP98-218ENST00000530516 OBSCNQ5VST9 7968 aa2.73□□□□□ -1.97
NUP98-218ENST00000530516 A0A1W2PR77 199 aa2.73□□□□□ -1.97
NUP98-218ENST00000530516 FRMD3A2A2Y4 597 aa2.73□□□□□ -1.97
NUP98-218ENST00000530516 TMEM189-UBE2V1I3L0A0 370 aa2.73□□□□□ -1.97
NUP98-218ENST00000530516 J3QR06 171 aa2.73□□□□□ -1.97
NUP98-218ENST00000530516 PLK4O00444 970 aa2.73□□□□□ -1.97
NUP98-218ENST00000530516 OGG1O15527 345 aa2.73□□□□□ -1.97
NUP98-218ENST00000530516 BUD23O43709 281 aaKnown RBP2.73□□□□□ -1.97
NUP98-218ENST00000530516 PCDH7O60245 1069 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms