RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 F5H0A9 414 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-212ENST00000529046 PI4K2BG5E9Z4 385 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 STMND1H3BQB6 276 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 MEIS2O14770 477 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 IFIT3O14879 490 aaKnown RBP4.87□□□□□ -1.63
CSDE1-212ENST00000529046 LDLRAD4O15165 306 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 ZC3H11AO75152 810 aaKnown RBP eCLIP4.87□□□□□ -1.63
CSDE1-212ENST00000529046 GGPS1O95749 300 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 IL1AP01583 271 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 RB1P06400 928 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 SMIM10L2AP0DMW4 78 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 SMIM10L2BP0DMW5 78 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 CALM1P0DP23 149 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 CALM2P0DP24 149 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 CALM3P0DP25 149 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 COX7A2P14406 83 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 AVPR1AP37288 418 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 CXCR3P49682 368 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 HTR6P50406 440 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 CASP6P55212 293 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 ZP1P60852 638 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 UFM1P61960 85 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 DEFB103AP81534 67 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 WTAPQ15007 396 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 PRTGQ2VWP7 1150 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 SERTAD4-AS1Q5TG53 156 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 TXNDC8Q6A555 127 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 HEPHL1Q6MZM0 1159 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 HORMAD2Q8N7B1 307 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 DNAAF1Q8NEP3 725 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 DBF4BQ8NFT6 615 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 SEPT8Q92599 483 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 ATP6V0A1Q93050 837 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 ZUFSPQ96AP4 578 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 MRPL38Q96DV4 380 aaKnown RBP4.87□□□□□ -1.63
CSDE1-212ENST00000529046 MARK4Q96L34 752 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 IL25Q9H293 177 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 VAT1LQ9HCJ6 419 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 SPATS2LQ9NUQ6 558 aaKnown RBP4.87□□□□□ -1.63
CSDE1-212ENST00000529046 KIAA1456Q9P272 454 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 ZNF580Q9UK33 172 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 ZNF215Q9UL58 517 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-212ENST00000529046 PCDHGB5Q9Y5G0 923 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 TANC1Q9C0D5 1861 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 KIAA1217Q5T5P2 1943 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 A0A0U1RQF3 1178 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 FAM90A8PA6NJQ4 464 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 HMGB1P1B2RPK0 211 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-212ENST00000529046 LDB2O43679 373 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 LCATP04180 440 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 LGALS2P05162 132 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 FAM90A13PP0C7W8 464 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 FAM90A24PP0C7X0 464 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 ZNF286BP0CG31 522 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 ARSBP15848 533 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 CD53P19397 219 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 HOXA13P31271 388 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-212ENST00000529046 CCKBRP32239 447 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 RFX2P48378 723 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 PPP3CCP48454 512 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 THBS3P49746 956 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 YWHAZP63104 245 aaKnown RBP4.86□□□□□ -1.63
CSDE1-212ENST00000529046 ADORA2A-AS1P86434 159 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 PTGR1Q14914 329 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 TCTN1Q2MV58 587 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 RUSC1-AS1Q66K80 236 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 ZNF549Q6P9A3 640 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 SLC22A25Q6T423 547 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 CRELD2Q6UXH1 353 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-212ENST00000529046 TRILQ7L0X0 811 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 CHST3Q7LGC8 479 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 MB21D2Q8IYB1 491 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-212ENST00000529046 NME8Q8N427 588 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 CTCFLQ8NI51 663 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-212ENST00000529046 EXOC6Q8TAG9 804 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 CEP76Q8TAP6 659 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 NEK9Q8TD19 979 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 GDPD5Q8WTR4 605 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 ARNTL2Q8WYA1 636 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 SEPT1Q8WYJ6 367 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 ZNF689Q96CS4 500 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-212ENST00000529046 LYZL4Q96KX0 146 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 C7orf26Q96N11 449 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 NAP1L4Q99733 375 aaKnown RBP4.86□□□□□ -1.63
CSDE1-212ENST00000529046 SLC26A6Q9BXS9 759 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 ISCUQ9H1K1 167 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 SLC32A1Q9H598 525 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 LY9Q9HBG7 655 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 SNTG1Q9NSN8 517 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 C20orf141Q9NUB4 165 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 ANKRD10Q9NXR5 420 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 ERAP1Q9NZ08 941 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 IL1RAPL1Q9NZN1 696 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 SARDHQ9UL12 918 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 ARHGAP26Q9UNA1 814 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 BDP1A6H8Y1 2624 aa4.86□□□□□ -1.63
CSDE1-212ENST00000529046 CLEC18AA5D8T8 446 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 I6L893 689 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-212ENST00000529046 TSPAN4O14817 238 aa4.85□□□□□ -1.63
CSDE1-212ENST00000529046 EPB41L2O43491 1005 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms