RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 ZNF449Q6P9G9 518 aa8.95□□□□□ -0.98
CMTM1-210ENST00000528441 TMEM220Q6QAJ8 160 aa8.95□□□□□ -0.98
CMTM1-210ENST00000528441 AMZ2Q86W34 360 aa8.95□□□□□ -0.98
CMTM1-210ENST00000528441 TMEM139Q8IV31 216 aa8.95□□□□□ -0.98
CMTM1-210ENST00000528441 OTUD6BQ8N6M0 293 aa8.95□□□□□ -0.98
CMTM1-210ENST00000528441 ZNF398Q8TD17 642 aa8.95□□□□□ -0.98
CMTM1-210ENST00000528441 ATG4AQ8WYN0 398 aa8.95□□□□□ -0.98
CMTM1-210ENST00000528441 USP7Q93009 1102 aa8.95□□□□□ -0.98
CMTM1-210ENST00000528441 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.95□□□□□ -0.98
CMTM1-210ENST00000528441 TMEM159Q96B96 161 aa8.95□□□□□ -0.98
CMTM1-210ENST00000528441 ULK4Q96C45 1275 aa8.95□□□□□ -0.98
CMTM1-210ENST00000528441 EID2BQ96D98 161 aa8.95□□□□□ -0.98
CMTM1-210ENST00000528441 CRELD1Q96HD1 420 aa8.95□□□□□ -0.98
CMTM1-210ENST00000528441 SLC46A1Q96NT5 459 aa8.95□□□□□ -0.98
CMTM1-210ENST00000528441 VPS35Q96QK1 796 aa8.95□□□□□ -0.98
CMTM1-210ENST00000528441 DPYSL5Q9BPU6 564 aa8.95□□□□□ -0.98
CMTM1-210ENST00000528441 TIMM29Q9BSF4 260 aa8.95□□□□□ -0.98
CMTM1-210ENST00000528441 LRRC40Q9H9A6 602 aa8.95□□□□□ -0.98
CMTM1-210ENST00000528441 PIH1D1Q9NWS0 290 aaKnown RBP8.95□□□□□ -0.98
CMTM1-210ENST00000528441 CPNE7Q9UBL6 633 aa8.95□□□□□ -0.98
CMTM1-210ENST00000528441 CNOT6Q9ULM6 557 aaKnown RBP8.95□□□□□ -0.98
CMTM1-210ENST00000528441 ADGRG1Q9Y653 693 aa8.95□□□□□ -0.98
CMTM1-210ENST00000528441 EPG5Q9HCE0 2579 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 SCN8AQ9UQD0 1980 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 IGHV1OR21-1A0A087WYE8 117 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 DDX3YO15523 660 aaKnown RBP8.94□□□□□ -0.98
CMTM1-210ENST00000528441 GPR39O43194 453 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 B4GAT1O43505 415 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 SRP72O76094 671 aaKnown RBP8.94□□□□□ -0.98
CMTM1-210ENST00000528441 TPH1P17752 444 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 SLC5A2P31639 672 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 MC4RP32245 332 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 ARL4DP49703 201 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 ATP1A2P50993 1020 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 PDX1P52945 283 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 PARP6Q2NL67 630 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 GPRC6AQ5T6X5 926 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 ARMC6Q6NXE6 501 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 IRGCQ6NXR0 463 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 CCDC81Q6ZN84 652 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 GPR155Q7Z3F1 870 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 LINC00523Q86TU6 105 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 SFRP1Q8N474 314 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 ZSCAN1Q8NBB4 408 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 AGBL5Q8NDL9 886 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 OR13C4Q8NGS5 318 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 MAIP1Q8WWC4 291 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 C1orf54Q8WWF1 131 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 JPH3Q8WXH2 748 aaPredicted RBP8.94□□□□□ -0.98
CMTM1-210ENST00000528441 TADA1Q96BN2 335 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 SCARF2Q96GP6 870 aaPredicted RBP8.94□□□□□ -0.98
CMTM1-210ENST00000528441 TBC1D10AQ9BXI6 508 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 DPH1Q9BZG8 443 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 FAM96AQ9H5X1 160 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 CPNE5Q9HCH3 593 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 SARS2Q9NP81 518 aaKnown RBP8.94□□□□□ -0.98
CMTM1-210ENST00000528441 IL26Q9NPH9 171 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 ASCL3Q9NQ33 180 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 IMP3Q9NV31 184 aaKnown RBP8.94□□□□□ -0.98
CMTM1-210ENST00000528441 SLC39A1Q9NY26 324 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 PLA2G2EQ9NZK7 142 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 IL17CQ9P0M4 197 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 NFKBIL1Q9UBC1 381 aaPredicted RBP8.94□□□□□ -0.98
CMTM1-210ENST00000528441 FEZ2Q9UHY8 353 aaPredicted RBP8.94□□□□□ -0.98
CMTM1-210ENST00000528441 PSMD13Q9UNM6 376 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 PCYT1BQ9Y5K3 369 aaPredicted RBP8.94□□□□□ -0.98
CMTM1-210ENST00000528441 AKAP13Q12802 2813 aa8.94□□□□□ -0.98
CMTM1-210ENST00000528441 APC2O95996 2303 aa8.93□□□□□ -0.98
CMTM1-210ENST00000528441 PRAMEF33A0A0G2JMD5 474 aa8.93□□□□□ -0.98
CMTM1-210ENST00000528441 IGHV5-10-1A0A0J9YXX1 117 aa8.93□□□□□ -0.98
CMTM1-210ENST00000528441 OR52A4PA6NMU1 304 aa8.93□□□□□ -0.98
CMTM1-210ENST00000528441 CCL22O00626 93 aa8.93□□□□□ -0.98
CMTM1-210ENST00000528441 HGSO14964 777 aaPredicted RBP8.93□□□□□ -0.98
CMTM1-210ENST00000528441 CEP104O60308 925 aa8.93□□□□□ -0.98
CMTM1-210ENST00000528441 PRAMEF10O60809 474 aa8.93□□□□□ -0.98
CMTM1-210ENST00000528441 POP7O75817 140 aaKnown RBP8.93□□□□□ -0.98
CMTM1-210ENST00000528441 DXOO77932 396 aaKnown RBP8.93□□□□□ -0.98
CMTM1-210ENST00000528441 EML2O95834 649 aa8.93□□□□□ -0.98
CMTM1-210ENST00000528441 CAPNS1P04632 268 aa8.93□□□□□ -0.98
CMTM1-210ENST00000528441 SLC35G4P0C7Q5 338 aa8.93□□□□□ -0.98
CMTM1-210ENST00000528441 CD1CP29017 333 aa8.93□□□□□ -0.98
CMTM1-210ENST00000528441 FDFT1P37268 417 aa8.93□□□□□ -0.98
CMTM1-210ENST00000528441 FASLGP48023 281 aa8.93□□□□□ -0.98
CMTM1-210ENST00000528441 SEPHS1P49903 392 aa8.93□□□□□ -0.98
CMTM1-210ENST00000528441 CLCNKAP51800 687 aa8.93□□□□□ -0.98
CMTM1-210ENST00000528441 LIMK2P53671 638 aa8.93□□□□□ -0.98
CMTM1-210ENST00000528441 BASP1P80723 227 aaKnown RBP8.93□□□□□ -0.98
CMTM1-210ENST00000528441 FOXM1Q08050 763 aa8.93□□□□□ -0.98
CMTM1-210ENST00000528441 TRA2AQ13595 282 aaKnown RBP eCLIP8.93□□□□□ -0.98
CMTM1-210ENST00000528441 C16orf72Q14CZ0 275 aa8.93□□□□□ -0.98
CMTM1-210ENST00000528441 CLPPQ16740 277 aaPredicted RBP8.93□□□□□ -0.98
CMTM1-210ENST00000528441 TMEM71Q6P5X7 295 aa8.93□□□□□ -0.98
CMTM1-210ENST00000528441 IYDQ6PHW0 289 aa8.93□□□□□ -0.98
CMTM1-210ENST00000528441 SLC13A5Q86YT5 568 aaPredicted RBP8.93□□□□□ -0.98
CMTM1-210ENST00000528441 PLXDC1Q8IUK5 500 aa8.93□□□□□ -0.98
CMTM1-210ENST00000528441 LRRC8AQ8IWT6 810 aa8.93□□□□□ -0.98
CMTM1-210ENST00000528441 IL22RA1Q8N6P7 574 aa8.93□□□□□ -0.98
CMTM1-210ENST00000528441 BEND7Q8N7W2 519 aaPredicted RBP8.93□□□□□ -0.98
CMTM1-210ENST00000528441 TRIM58Q8NG06 486 aa8.93□□□□□ -0.98
CMTM1-210ENST00000528441 OR4D9Q8NGE8 314 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms