RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 SYNDIG1Q9H7V2 258 aa7.16□□□□□ -1.26
CTNND1-218ENST00000528232 BRD9Q9H8M2 597 aa7.16□□□□□ -1.26
CTNND1-218ENST00000528232 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.16□□□□□ -1.26
CTNND1-218ENST00000528232 PTBP2Q9UKA9 531 aaKnown RBP7.16□□□□□ -1.26
CTNND1-218ENST00000528232 MAST2Q6P0Q8 1798 aa7.16□□□□□ -1.26
CTNND1-218ENST00000528232 MYH8P13535 1937 aa7.16□□□□□ -1.26
CTNND1-218ENST00000528232 A0A088AWK7 358 aa7.16□□□□□ -1.26
CTNND1-218ENST00000528232 FAM47E-STBD1D6RA91 191 aa7.16□□□□□ -1.26
CTNND1-218ENST00000528232 FFAR3O14843 346 aa7.16□□□□□ -1.26
CTNND1-218ENST00000528232 SLC22A2O15244 555 aa7.16□□□□□ -1.26
CTNND1-218ENST00000528232 GPR42O15529 346 aa7.16□□□□□ -1.26
CTNND1-218ENST00000528232 PKMP14618 531 aaKnown RBP7.16□□□□□ -1.26
CTNND1-218ENST00000528232 TSPAN8P19075 237 aa7.16□□□□□ -1.26
CTNND1-218ENST00000528232 ZNF10P21506 573 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-218ENST00000528232 NMBRP28336 390 aa7.16□□□□□ -1.26
CTNND1-218ENST00000528232 SLC25A11Q02978 314 aaKnown RBP7.16□□□□□ -1.26
CTNND1-218ENST00000528232 AKIRIN2Q53H80 203 aa7.16□□□□□ -1.26
CTNND1-218ENST00000528232 C6orf183Q5T699 404 aa7.16□□□□□ -1.26
CTNND1-218ENST00000528232 FSTL4Q6MZW2 842 aa7.16□□□□□ -1.26
CTNND1-218ENST00000528232 CPNE8Q86YQ8 564 aa7.16□□□□□ -1.26
CTNND1-218ENST00000528232 TMEM192Q8IY95 271 aa7.16□□□□□ -1.26
CTNND1-218ENST00000528232 SPERTQ8NA61 448 aa7.16□□□□□ -1.26
CTNND1-218ENST00000528232 DNAJB14Q8TBM8 379 aa7.16□□□□□ -1.26
CTNND1-218ENST00000528232 HMCESQ96FZ2 354 aa7.16□□□□□ -1.26
CTNND1-218ENST00000528232 COPS8Q99627 209 aa7.16□□□□□ -1.26
CTNND1-218ENST00000528232 CAPN10Q9HC96 672 aa7.16□□□□□ -1.26
CTNND1-218ENST00000528232 MAGEL2Q9UJ55 1249 aa7.16□□□□□ -1.26
CTNND1-218ENST00000528232 CDH22Q9UJ99 828 aa7.16□□□□□ -1.26
CTNND1-218ENST00000528232 CHKBQ9Y259 395 aa7.16□□□□□ -1.26
CTNND1-218ENST00000528232 LRRC42Q9Y546 428 aa7.16□□□□□ -1.26
CTNND1-218ENST00000528232 C10orf71Q711Q0 1435 aa7.16□□□□□ -1.26
CTNND1-218ENST00000528232 GRIN2DO15399 1336 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 A0A1W2PQ67 120 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 DHRS12A0PJE2 317 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 MOXD2PA6NHM9 499 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 FOXO6A8MYZ6 492 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 NRP2O60462 931 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 CNPP09543 421 aaKnown RBP7.15□□□□□ -1.26
CTNND1-218ENST00000528232 IL1R2P27930 398 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 FAUP35544 74 aaKnown RBP7.15□□□□□ -1.26
CTNND1-218ENST00000528232 CAPGP40121 348 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 GPR1P46091 355 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 DSC2Q02487 901 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 KCNJ11Q14654 390 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 PPM1JQ5JR12 505 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 GALNT18Q6P9A2 607 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 PEG10Q86TG7 708 aaKnown RBP7.15□□□□□ -1.26
CTNND1-218ENST00000528232 IZUMO1Q8IYV9 350 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 ELMOD2Q8IZ81 293 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 CFAP52Q8N1V2 620 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 ZNF420Q8TAQ5 688 aaPredicted RBP7.15□□□□□ -1.26
CTNND1-218ENST00000528232 CSGALNACT1Q8TDX6 532 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 KBTBD7Q8WVZ9 684 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 FCGR1BQ92637 280 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 CUEDC1Q9NWM3 386 aaPredicted RBP7.15□□□□□ -1.26
CTNND1-218ENST00000528232 ENTPD4Q9Y227 616 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 RAI2Q9Y5P3 530 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 TJP1Q07157 1748 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 A0A0J9YYE9 177 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 MYBPHLA2RUH7 354 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 SLC22A1O15245 554 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 TMEM63AO94886 807 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 CTNNB1P35222 781 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 MPP1Q00013 466 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 TUBB3Q13509 450 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 USF2Q15853 346 aaPredicted RBP7.15□□□□□ -1.26
CTNND1-218ENST00000528232 SWI5Q1ZZU3 235 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 XKR6Q5GH73 641 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 LCN1P1Q5VSP4 162 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 NCBP2-AS2Q69YL0 99 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 RAET1GQ6H3X3 334 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 CLEC20AQ6ZU45 233 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 NPAS4Q8IUM7 802 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 RBM15BQ8NDT2 890 aaKnown RBP7.15□□□□□ -1.26
CTNND1-218ENST00000528232 GSTCDQ8NEC7 633 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 OR4K2Q8NGD2 314 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 FNDC8Q8TC99 324 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 CLEC4CQ8WTT0 213 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 DCAKDQ8WVC6 231 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 USP7Q93009 1102 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 SIPA1Q96FS4 1042 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 FUBP3Q96I24 572 aaKnown RBP eCLIP7.15□□□□□ -1.26
CTNND1-218ENST00000528232 TEKT5Q96M29 485 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 BIRC8Q96P09 236 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 NPAS2Q99743 824 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 MED28Q9H204 178 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 KCTD5Q9NXV2 234 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 ANGPT4Q9Y264 503 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 PCDHB9Q9Y5E1 797 aa7.15□□□□□ -1.26
CTNND1-218ENST00000528232 CDH5P33151 784 aaPredicted RBP7.15□□□□□ -1.27
CTNND1-218ENST00000528232 CRATP43155 626 aa7.15□□□□□ -1.27
CTNND1-218ENST00000528232 HNRNPDQ14103 355 aaKnown RBP7.15□□□□□ -1.27
CTNND1-218ENST00000528232 SH3PXD2AQ5TCZ1 1133 aa7.15□□□□□ -1.27
CTNND1-218ENST00000528232 ANXA8L1Q5VT79 327 aa7.15□□□□□ -1.27
CTNND1-218ENST00000528232 FUT10Q6P4F1 479 aa7.15□□□□□ -1.27
CTNND1-218ENST00000528232 CERS6Q6ZMG9 384 aa7.15□□□□□ -1.27
CTNND1-218ENST00000528232 GK5Q6ZS86 529 aa7.15□□□□□ -1.27
CTNND1-218ENST00000528232 PGAM4Q8N0Y7 254 aa7.15□□□□□ -1.27
CTNND1-218ENST00000528232 MAGEE2Q8TD90 523 aaPredicted RBP7.15□□□□□ -1.27
CTNND1-218ENST00000528232 DDX1Q92499 740 aaKnown RBP7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms