RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 LRRC8DQ7L1W4 858 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 PODNQ7Z5L7 613 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 RAB43Q86YS6 212 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 DTWD1Q8N5C7 304 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 SIMC1Q8NDZ2 872 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 OR6P1Q8NGX9 317 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 BPIFB1Q8TDL5 484 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 UGT2B28Q9BY64 529 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 CLPBQ9H078 707 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 CDH9Q9ULB4 789 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 PCDHGA10Q9Y5H3 936 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 GREB1LQ9C091 1923 aaPredicted RBP12.38□□□□□ -0.43
TSKU-203ENST00000527881 PSME4Q14997 1843 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 MYO1GB0I1T2 1018 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 HAT1O14929 419 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 GOT2P00505 430 aaKnown RBP12.38□□□□□ -0.43
TSKU-203ENST00000527881 AZGP1P25311 298 aaKnown RBP12.38□□□□□ -0.43
TSKU-203ENST00000527881 PTGS2P35354 604 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 SLC15A1P46059 708 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 HTR3AP46098 478 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 POLD2P49005 469 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 CBX2Q14781 532 aaPredicted RBP12.38□□□□□ -0.43
TSKU-203ENST00000527881 SMN1Q16637 294 aaKnown RBP12.38□□□□□ -0.43
TSKU-203ENST00000527881 BCL7AQ4VC05 210 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 ENPP6Q6UWR7 440 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 ZNF438Q7Z4V0 828 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 NLGN4XQ8N0W4 816 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 FAM86B1Q8N7N1 296 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 CDHR1Q96JP9 859 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 DHRS9Q9BPW9 319 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 FICDQ9BVA6 458 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 LRRC3Q9BY71 257 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 MAT2BQ9NZL9 334 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 DNAJB9Q9UBS3 223 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 ZNF639Q9UID6 485 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 PCDHGB6Q9Y5F9 930 aa12.38□□□□□ -0.43
TSKU-203ENST00000527881 MITFO75030 526 aaPredicted RBP12.37□□□□□ -0.43
TSKU-203ENST00000527881 IL12RB1P42701 662 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 ISL1P61371 349 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 PITX1P78337 314 aaPredicted RBP12.37□□□□□ -0.43
TSKU-203ENST00000527881 POU4F1Q01851 419 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 PCSK7Q16549 785 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 PNCKQ6P2M8 343 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 PKN3Q6P5Z2 889 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 LDB1Q86U70 411 aaPredicted RBP12.37□□□□□ -0.43
TSKU-203ENST00000527881 OR10Q1Q8NGQ4 319 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 SEPT1Q8WYJ6 367 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 BCL7BQ9BQE9 202 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 TRMOQ9BU70 441 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 FSD1LQ9BXM9 530 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 MKRN2Q9H000 416 aaKnown RBP12.37□□□□□ -0.43
TSKU-203ENST00000527881 ACTR8Q9H981 624 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 SEMA4BQ9NPR2 832 aaPredicted RBP12.37□□□□□ -0.43
TSKU-203ENST00000527881 IGSF5Q9NSI5 407 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 STAP1Q9ULZ2 295 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 KLHL20Q9Y2M5 609 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 ERI2A8K979 691 aaKnown RBP12.37□□□□□ -0.43
TSKU-203ENST00000527881 ZNF487B1APH4 448 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 ERVH48-1M5A8F1 160 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 TSC22D2O75157 780 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 SLC22A3O75751 556 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 MT-CYBP00156 380 aaPredicted RBP12.37□□□□□ -0.43
TSKU-203ENST00000527881 YES1P07947 543 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 HSMCR30P0CW71 290 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 IMPDH1P20839 514 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 FOXM1Q08050 763 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 TRIP11Q15643 1979 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 TAB1Q15750 504 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 PLEKHG6Q3KR16 790 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 PCID2Q5JVF3 399 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 CYHR1Q6ZMK1 362 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 TP53I13Q8NBR0 393 aaPredicted RBP12.37□□□□□ -0.43
TSKU-203ENST00000527881 PAPD5Q8NDF8 572 aaKnown RBP12.37□□□□□ -0.43
TSKU-203ENST00000527881 SETD9Q8NE22 299 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 CERKQ8TCT0 537 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 SLC47A1Q96FL8 570 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 TEX37Q96LM6 180 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.37□□□□□ -0.43
TSKU-203ENST00000527881 POLG2Q9UHN1 485 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 ADGRE2Q9UHX3 823 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 GMPPBQ9Y5P6 360 aa12.37□□□□□ -0.43
TSKU-203ENST00000527881 PNMA8CA0A1B0GUJ8 204 aa12.36□□□□□ -0.43
TSKU-203ENST00000527881 CYP11A1P05108 521 aa12.36□□□□□ -0.43
TSKU-203ENST00000527881 STAG3L1P0CL83 205 aa12.36□□□□□ -0.43
TSKU-203ENST00000527881 NOS2P35228 1153 aa12.36□□□□□ -0.43
TSKU-203ENST00000527881 SLC26A3P40879 764 aa12.36□□□□□ -0.43
TSKU-203ENST00000527881 OR3A3P47888 321 aa12.36□□□□□ -0.43
TSKU-203ENST00000527881 POLR2JP52435 117 aaKnown RBP12.36□□□□□ -0.43
TSKU-203ENST00000527881 GHRHRQ02643 423 aa12.36□□□□□ -0.43
TSKU-203ENST00000527881 TMEM132DQ14C87 1099 aa12.36□□□□□ -0.43
TSKU-203ENST00000527881 BRMS1LQ5PSV4 323 aa12.36□□□□□ -0.43
TSKU-203ENST00000527881 TWF2Q6IBS0 349 aaKnown RBP12.36□□□□□ -0.43
TSKU-203ENST00000527881 NRARPQ7Z6K4 114 aa12.36□□□□□ -0.43
TSKU-203ENST00000527881 SNAPC3Q92966 411 aa12.36□□□□□ -0.43
TSKU-203ENST00000527881 PABPC5Q96DU9 382 aaKnown RBP12.36□□□□□ -0.43
TSKU-203ENST00000527881 NSUN5Q96P11 429 aaKnown RBP12.36□□□□□ -0.43
TSKU-203ENST00000527881 RAPGEFL1Q9UHV5 662 aa12.36□□□□□ -0.43
TSKU-203ENST00000527881 RIPK3Q9Y572 518 aa12.36□□□□□ -0.43
TSKU-203ENST00000527881 NRAPQ86VF7 1730 aa12.36□□□□□ -0.43
TSKU-203ENST00000527881 TYW5A2RUC4 315 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms