RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 ANKS6Q68DC2 871 aa17.09■□□□□ 0.33
PCDHA6-202ENST00000527624 RNF111Q6ZNA4 994 aa17.09■□□□□ 0.33
PCDHA6-202ENST00000527624 DHDDSQ86SQ9 333 aa17.09■□□□□ 0.33
PCDHA6-202ENST00000527624 AHI1Q8N157 1196 aa17.09■□□□□ 0.33
PCDHA6-202ENST00000527624 SMG7Q92540 1137 aaKnown RBP17.09■□□□□ 0.33
PCDHA6-202ENST00000527624 RCN3Q96D15 328 aa17.09■□□□□ 0.33
PCDHA6-202ENST00000527624 ECSITQ9BQ95 431 aa17.09■□□□□ 0.33
PCDHA6-202ENST00000527624 B4GALT6Q9UBX8 382 aa17.09■□□□□ 0.33
PCDHA6-202ENST00000527624 ASB1Q9Y576 335 aa17.09■□□□□ 0.33
PCDHA6-202ENST00000527624 GBF1Q92538 1859 aa17.09■□□□□ 0.33
PCDHA6-202ENST00000527624 ZNF197O14709 1029 aa17.08■□□□□ 0.33
PCDHA6-202ENST00000527624 AZIN1O14977 448 aa17.08■□□□□ 0.33
PCDHA6-202ENST00000527624 UBDO15205 165 aa17.08■□□□□ 0.33
PCDHA6-202ENST00000527624 SLC25A14O95258 325 aaPredicted RBP17.08■□□□□ 0.33
PCDHA6-202ENST00000527624 RB1P06400 928 aa17.08■□□□□ 0.33
PCDHA6-202ENST00000527624 RPS17P08708 135 aaKnown RBP17.08■□□□□ 0.33
PCDHA6-202ENST00000527624 RPS3P23396 243 aaKnown RBP eCLIP17.08■□□□□ 0.33
PCDHA6-202ENST00000527624 VIPR2P41587 438 aa17.08■□□□□ 0.33
PCDHA6-202ENST00000527624 RECQLP46063 649 aaPredicted RBP17.08■□□□□ 0.33
PCDHA6-202ENST00000527624 GPM6BQ13491 265 aa17.08■□□□□ 0.33
PCDHA6-202ENST00000527624 NXPE1Q8N323 547 aa17.08■□□□□ 0.33
PCDHA6-202ENST00000527624 RP9Q8TA86 221 aaKnown RBP17.08■□□□□ 0.33
PCDHA6-202ENST00000527624 PBXIP1Q96AQ6 731 aa17.08■□□□□ 0.33
PCDHA6-202ENST00000527624 RSPRY1Q96DX4 576 aa17.08■□□□□ 0.33
PCDHA6-202ENST00000527624 ZNF641Q96N77 438 aaPredicted RBP17.08■□□□□ 0.33
PCDHA6-202ENST00000527624 MCCC1Q96RQ3 725 aaPredicted RBP17.08■□□□□ 0.33
PCDHA6-202ENST00000527624 MCOLN1Q9GZU1 580 aa17.08■□□□□ 0.33
PCDHA6-202ENST00000527624 FBRSL1Q9HCM7 1045 aaKnown RBP17.08■□□□□ 0.33
PCDHA6-202ENST00000527624 EIF2B4Q9UI10 523 aaKnown RBP17.08■□□□□ 0.33
PCDHA6-202ENST00000527624 LINGO3P0C6S8 592 aa17.08■□□□□ 0.32
PCDHA6-202ENST00000527624 CDC16Q13042 620 aa17.08■□□□□ 0.32
PCDHA6-202ENST00000527624 DMC1Q14565 340 aa17.08■□□□□ 0.32
PCDHA6-202ENST00000527624 DHCR24Q15392 516 aa17.08■□□□□ 0.32
PCDHA6-202ENST00000527624 TGFBIQ15582 683 aa17.08■□□□□ 0.32
PCDHA6-202ENST00000527624 GDPD4Q6W3E5 623 aa17.08■□□□□ 0.32
PCDHA6-202ENST00000527624 GK5Q6ZS86 529 aa17.08■□□□□ 0.32
PCDHA6-202ENST00000527624 CHSY3Q70JA7 882 aa17.08■□□□□ 0.32
PCDHA6-202ENST00000527624 DDIASQ8IXT1 998 aa17.08■□□□□ 0.32
PCDHA6-202ENST00000527624 CBARPQ8N350 705 aaPredicted RBP17.08■□□□□ 0.32
PCDHA6-202ENST00000527624 ZNF366Q8N895 744 aa17.08■□□□□ 0.32
PCDHA6-202ENST00000527624 TWIST2Q8WVJ9 160 aa17.08■□□□□ 0.32
PCDHA6-202ENST00000527624 GATA6Q92908 595 aa17.08■□□□□ 0.32
PCDHA6-202ENST00000527624 ASB2Q96Q27 587 aa17.08■□□□□ 0.32
PCDHA6-202ENST00000527624 GIMAP2Q9UG22 337 aa17.08■□□□□ 0.32
PCDHA6-202ENST00000527624 CD84Q9UIB8 345 aa17.08■□□□□ 0.32
PCDHA6-202ENST00000527624 SOBPA7XYQ1 873 aa17.07■□□□□ 0.32
PCDHA6-202ENST00000527624 PIP5K1BO14986 540 aa17.07■□□□□ 0.32
PCDHA6-202ENST00000527624 KLK8O60259 260 aa17.07■□□□□ 0.32
PCDHA6-202ENST00000527624 GPC4O75487 556 aa17.07■□□□□ 0.32
PCDHA6-202ENST00000527624 CYP17A1P05093 508 aa17.07■□□□□ 0.32
PCDHA6-202ENST00000527624 PRDX3P30048 256 aaKnown RBP17.07■□□□□ 0.32
PCDHA6-202ENST00000527624 GSTA3Q16772 222 aa17.07■□□□□ 0.32
PCDHA6-202ENST00000527624 ATP13A5Q4VNC0 1218 aa17.07■□□□□ 0.32
PCDHA6-202ENST00000527624 KANK2Q63ZY3 851 aa17.07■□□□□ 0.32
PCDHA6-202ENST00000527624 FRA10AC1Q70Z53 315 aa17.07■□□□□ 0.32
PCDHA6-202ENST00000527624 ZNF557Q8N988 423 aaPredicted RBP17.07■□□□□ 0.32
PCDHA6-202ENST00000527624 KYQ8NBH2 561 aa17.07■□□□□ 0.32
PCDHA6-202ENST00000527624 OTUB2Q96DC9 234 aa17.07■□□□□ 0.32
PCDHA6-202ENST00000527624 MRGPRX3Q96LB0 322 aa17.07■□□□□ 0.32
PCDHA6-202ENST00000527624 PLEKHG4BQ96PX9 1271 aa17.07■□□□□ 0.32
PCDHA6-202ENST00000527624 VCXQ9H320 206 aa17.07■□□□□ 0.32
PCDHA6-202ENST00000527624 DUS2Q9NX74 493 aaKnown RBP17.07■□□□□ 0.32
PCDHA6-202ENST00000527624 MARK1Q9P0L2 795 aa17.07■□□□□ 0.32
PCDHA6-202ENST00000527624 PCTPQ9UKL6 214 aa17.07■□□□□ 0.32
PCDHA6-202ENST00000527624 PACSIN3Q9UKS6 424 aa17.07■□□□□ 0.32
PCDHA6-202ENST00000527624 PRPF19Q9UMS4 504 aaKnown RBP17.07■□□□□ 0.32
PCDHA6-202ENST00000527624 BTRCQ9Y297 605 aa17.07■□□□□ 0.32
PCDHA6-202ENST00000527624 PPIL1Q9Y3C6 166 aa17.07■□□□□ 0.32
PCDHA6-202ENST00000527624 C5orf42Q9H799 3197 aa17.07■□□□□ 0.32
PCDHA6-202ENST00000527624 SCN8AQ9UQD0 1980 aa17.07■□□□□ 0.32
PCDHA6-202ENST00000527624 STX16-NPEPL1H3BU86 382 aa17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 STX16O14662 325 aa17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 FGF4P08620 206 aa17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 C1SP09871 688 aa17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 C18orf21Q32NC0 220 aaPredicted RBP17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 POM121L1PQ3SYA9 428 aa17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 GPR33Q49SQ1 333 aa17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 KBTBD6Q86V97 674 aa17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 C12orf40Q86WS4 652 aa17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 DCBLD1Q8N8Z6 715 aa17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 HMGCLL1Q8TB92 370 aa17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 FRS2Q8WU20 508 aa17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 C19orf43Q9BQ61 176 aa17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 DLGAP2Q9P1A6 1054 aa17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 SLC9A3R1O14745 358 aaPredicted RBP17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 CRCPO75575 148 aa17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 LEFTY1O75610 366 aa17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 RBBP7Q16576 425 aa17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 ARSIQ5FYB1 569 aa17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 LYPLAL1Q5VWZ2 237 aa17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 TXNDC11Q6PKC3 985 aa17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 C16orf89Q6UX73 402 aa17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 LARP4Q71RC2 724 aaKnown RBP eCLIP17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 DSELQ8IZU8 1212 aa17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 CELF5Q8N6W0 485 aaKnown RBP17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 HIPK4Q8NE63 616 aa17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 ZFYVE19Q96K21 471 aa17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 HGH1Q9BTY7 390 aa17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 HTATIP2Q9BUP3 242 aa17.06■□□□□ 0.32
PCDHA6-202ENST00000527624 TUBB1Q9H4B7 451 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms